RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 MAP3K5Q99683 1374 aa11.39□□□□□ -0.59
PTCH1-204ENST00000375290 ANO1Q5XXA6 986 aa11.39□□□□□ -0.59
PTCH1-204ENST00000375290 LZTFL1Q9NQ48 299 aa11.39□□□□□ -0.59
PTCH1-204ENST00000375290 ATP6V0A2Q9Y487 856 aa11.39□□□□□ -0.59
PTCH1-204ENST00000375290 YEATS2Q9ULM3 1422 aa11.39□□□□□ -0.59
PTCH1-204ENST00000375290 ERCC5P28715 1186 aaPredicted RBP11.39□□□□□ -0.59
PTCH1-204ENST00000375290 NBPF14Q5TI25 921 aa11.39□□□□□ -0.59
PTCH1-204ENST00000375290 FNBP4Q8N3X1 1017 aaPredicted RBP11.39□□□□□ -0.59
PTCH1-204ENST00000375290 BBOF1Q8ND07 529 aa11.39□□□□□ -0.59
PTCH1-204ENST00000375290 HLA-DOAP06340 250 aa11.39□□□□□ -0.59
PTCH1-204ENST00000375290 SMC1BQ8NDV3 1235 aa11.39□□□□□ -0.59
PTCH1-204ENST00000375290 ZNF274Q96GC6 653 aaPredicted RBP11.39□□□□□ -0.59
PTCH1-204ENST00000375290 EIF4G3O43432 1585 aaKnown RBP11.39□□□□□ -0.59
PTCH1-204ENST00000375290 CCDC65Q8IXS2 484 aa11.39□□□□□ -0.59
PTCH1-204ENST00000375290 TYW1Q9NV66 732 aaKnown RBP11.39□□□□□ -0.59
PTCH1-204ENST00000375290 BZW2Q9Y6E2 419 aaKnown RBP11.39□□□□□ -0.59
PTCH1-204ENST00000375290 IFNL2Q8IZJ0 200 aa11.39□□□□□ -0.59
PTCH1-204ENST00000375290 GDAP1L1Q96MZ0 367 aa11.39□□□□□ -0.59
PTCH1-204ENST00000375290 OSBPL3Q9H4L5 887 aa11.39□□□□□ -0.59
PTCH1-204ENST00000375290 KIF1BO60333 1816 aa11.38□□□□□ -0.59
PTCH1-204ENST00000375290 GRK7Q8WTQ7 553 aa11.38□□□□□ -0.59
PTCH1-204ENST00000375290 TCHPQ9BT92 498 aa11.38□□□□□ -0.59
PTCH1-204ENST00000375290 DSCC1Q9BVC3 393 aa11.38□□□□□ -0.59
PTCH1-204ENST00000375290 PRC1O43663 620 aa11.38□□□□□ -0.59
PTCH1-204ENST00000375290 ZNF853P0CG23 659 aa11.38□□□□□ -0.59
PTCH1-204ENST00000375290 MATR3P43243 847 aaKnown RBP eCLIP11.38□□□□□ -0.59
PTCH1-204ENST00000375290 KIAA1468Q9P260 1216 aa11.38□□□□□ -0.59
PTCH1-204ENST00000375290 ANKRD13DQ6ZTN6 518 aa11.38□□□□□ -0.59
PTCH1-204ENST00000375290 RANBP6O60518 1105 aaKnown RBP11.38□□□□□ -0.59
PTCH1-204ENST00000375290 ZKSCAN8Q15776 578 aaPredicted RBP11.38□□□□□ -0.59
PTCH1-204ENST00000375290 AKAP4Q5JQC9 854 aa11.38□□□□□ -0.59
PTCH1-204ENST00000375290 GALNT17Q6IS24 598 aa11.38□□□□□ -0.59
PTCH1-204ENST00000375290 PPP1R12CQ9BZL4 782 aa11.38□□□□□ -0.59
PTCH1-204ENST00000375290 KLHL14Q9P2G3 628 aa11.38□□□□□ -0.59
PTCH1-204ENST00000375290 FBXO3Q9UK99 471 aa11.38□□□□□ -0.59
PTCH1-204ENST00000375290 PAK1Q13153 545 aa11.38□□□□□ -0.59
PTCH1-204ENST00000375290 CBX8Q9HC52 389 aa11.38□□□□□ -0.59
PTCH1-204ENST00000375290 PI4KAP2A4QPH2 592 aa11.38□□□□□ -0.59
PTCH1-204ENST00000375290 U2AF2P26368 475 aaKnown RBP eCLIP11.38□□□□□ -0.59
PTCH1-204ENST00000375290 DEUP1Q05D60 604 aa11.38□□□□□ -0.59
PTCH1-204ENST00000375290 PI4KAP1Q8N8J0 262 aa11.38□□□□□ -0.59
PTCH1-204ENST00000375290 C10orf76Q5T2E6 689 aa11.38□□□□□ -0.59
PTCH1-204ENST00000375290 MCUR1Q96AQ8 359 aa11.38□□□□□ -0.59
PTCH1-204ENST00000375290 ZNF830Q96NB3 372 aaPredicted RBP11.38□□□□□ -0.59
PTCH1-204ENST00000375290 CAPS2Q9BXY5 557 aa11.38□□□□□ -0.59
PTCH1-204ENST00000375290 TBC1D31Q96DN5 1066 aa11.38□□□□□ -0.59
PTCH1-204ENST00000375290 TMOD3Q9NYL9 352 aa11.38□□□□□ -0.59
PTCH1-204ENST00000375290 APLFQ8IW19 511 aaPredicted RBP11.37□□□□□ -0.59
PTCH1-204ENST00000375290 MEIS3Q99687 375 aa11.37□□□□□ -0.59
PTCH1-204ENST00000375290 ZSWIM4Q9H7M6 989 aa11.37□□□□□ -0.59
PTCH1-204ENST00000375290 TXNDC16Q9P2K2 825 aa11.37□□□□□ -0.59
PTCH1-204ENST00000375290 ABCC4O15439 1325 aa11.37□□□□□ -0.59
PTCH1-204ENST00000375290 EIF3BP55884 814 aaKnown RBP11.37□□□□□ -0.59
PTCH1-204ENST00000375290 PPP1R7Q15435 360 aa11.37□□□□□ -0.59
PTCH1-204ENST00000375290 SYCP3Q8IZU3 236 aa11.37□□□□□ -0.59
PTCH1-204ENST00000375290 SPZ1Q9BXG8 430 aa11.37□□□□□ -0.59
PTCH1-204ENST00000375290 TSPY2A6NKD2 308 aa11.37□□□□□ -0.59
PTCH1-204ENST00000375290 EIF3CLB5ME19 914 aaKnown RBP11.37□□□□□ -0.59
PTCH1-204ENST00000375290 GAS8O95995 478 aa11.37□□□□□ -0.59
PTCH1-204ENST00000375290 EIF3CQ99613 913 aaKnown RBP11.37□□□□□ -0.59
PTCH1-204ENST00000375290 PTPRKQ15262 1439 aa11.37□□□□□ -0.59
PTCH1-204ENST00000375290 CD109Q6YHK3 1445 aa11.37□□□□□ -0.59
PTCH1-204ENST00000375290 ABCF2Q9UG63 623 aa11.37□□□□□ -0.59
PTCH1-204ENST00000375290 ZNF202O95125 648 aa11.37□□□□□ -0.59
PTCH1-204ENST00000375290 ASIC1P78348 528 aa11.37□□□□□ -0.59
PTCH1-204ENST00000375290 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.37□□□□□ -0.593e-6■■■■■ 50.8
PTCH1-204ENST00000375290 VEZTQ9HBM0 779 aa11.37□□□□□ -0.59
PTCH1-204ENST00000375290 ANGEL1Q9UNK9 670 aaKnown RBP11.37□□□□□ -0.59
PTCH1-204ENST00000375290 MINDY4BA8MYZ0 360 aa11.37□□□□□ -0.59
PTCH1-204ENST00000375290 GMNNO75496 209 aa11.37□□□□□ -0.59
PTCH1-204ENST00000375290 INF2Q27J81 1249 aa11.37□□□□□ -0.59
PTCH1-204ENST00000375290 LRCH2Q5VUJ6 765 aa11.37□□□□□ -0.59
PTCH1-204ENST00000375290 NBPF6Q5VWK0 638 aa11.37□□□□□ -0.59
PTCH1-204ENST00000375290 NBPF4Q96M43 638 aa11.37□□□□□ -0.59
PTCH1-204ENST00000375290 CUEDC2Q9H467 287 aa11.37□□□□□ -0.59
PTCH1-204ENST00000375290 RABGAP1Q9Y3P9 1069 aa11.37□□□□□ -0.59
PTCH1-204ENST00000375290 ALS2CLQ60I27 953 aa11.37□□□□□ -0.59
PTCH1-204ENST00000375290 SV2BQ7L1I2 683 aa11.37□□□□□ -0.59
PTCH1-204ENST00000375290 ATP2A3Q93084 1043 aa11.36□□□□□ -0.59
PTCH1-204ENST00000375290 CCDC8Q9H0W5 538 aaPredicted RBP11.36□□□□□ -0.59
PTCH1-204ENST00000375290 DNM2P50570 870 aa11.36□□□□□ -0.59
PTCH1-204ENST00000375290 PAF1Q8N7H5 531 aa11.36□□□□□ -0.59
PTCH1-204ENST00000375290 GFM2Q969S9 779 aaKnown RBP11.36□□□□□ -0.59
PTCH1-204ENST00000375290 A0A1B0GVL5 298 aa11.36□□□□□ -0.59
PTCH1-204ENST00000375290 SNCBQ16143 134 aa11.36□□□□□ -0.59
PTCH1-204ENST00000375290 GLE1Q53GS7 698 aaKnown RBP11.36□□□□□ -0.59
PTCH1-204ENST00000375290 DENND2CQ68D51 928 aa11.36□□□□□ -0.59
PTCH1-204ENST00000375290 A2MP01023 1474 aa11.36□□□□□ -0.59
PTCH1-204ENST00000375290 RHOXF2BP0C7M4 288 aa11.36□□□□□ -0.59
PTCH1-204ENST00000375290 RAB3IL1Q8TBN0 382 aa11.36□□□□□ -0.59
PTCH1-204ENST00000375290 RHOXF2Q9BQY4 288 aa11.36□□□□□ -0.59
PTCH1-204ENST00000375290 DDX23Q9BUQ8 820 aaKnown RBP11.36□□□□□ -0.59
PTCH1-204ENST00000375290 HAUS2Q9NVX0 235 aa11.36□□□□□ -0.59
PTCH1-204ENST00000375290 FRMD4BQ9Y2L6 1034 aa11.36□□□□□ -0.59
PTCH1-204ENST00000375290 LAD1O00515 517 aa11.36□□□□□ -0.59
PTCH1-204ENST00000375290 APBB1IPQ7Z5R6 666 aaPredicted RBP11.36□□□□□ -0.59
PTCH1-204ENST00000375290 ADGRF5Q8IZF2 1346 aa11.36□□□□□ -0.59
PTCH1-204ENST00000375290 EPHB4P54760 987 aa11.36□□□□□ -0.59
PTCH1-204ENST00000375290 NBPF10Q6P3W6 841 aaKnown RBP11.36□□□□□ -0.59
PTCH1-204ENST00000375290 MYD88Q99836 296 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms