RNA–Protein interactions for RNA: ENST00000374346.7

PTPN20-204, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 2,481 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-204ENST00000374346 ERICH2A1L162 156 aa13.13□□□□□ -0.31
PTPN20-204ENST00000374346 IFIT3O14879 490 aaKnown RBP13.13□□□□□ -0.31
PTPN20-204ENST00000374346 RXRAP19793 462 aa13.13□□□□□ -0.31
PTPN20-204ENST00000374346 CDC27P30260 824 aa13.13□□□□□ -0.31
PTPN20-204ENST00000374346 STRBPQ96SI9 672 aaKnown RBP13.13□□□□□ -0.31
PTPN20-204ENST00000374346 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.13□□□□□ -0.31
PTPN20-204ENST00000374346 LY9Q9HBG7 655 aa13.13□□□□□ -0.31
PTPN20-204ENST00000374346 MYO5AQ9Y4I1 1855 aaKnown RBP13.13□□□□□ -0.31
PTPN20-204ENST00000374346 TOGARAM1Q9Y4F4 1720 aa13.13□□□□□ -0.31
PTPN20-204ENST00000374346 CCDC196A0A1B0GTZ2 297 aa13.13□□□□□ -0.31
PTPN20-204ENST00000374346 TOP1P11387 765 aaKnown RBP13.13□□□□□ -0.31
PTPN20-204ENST00000374346 SLC5A1P13866 664 aa13.13□□□□□ -0.31
PTPN20-204ENST00000374346 GNAT2P19087 354 aa13.13□□□□□ -0.31
PTPN20-204ENST00000374346 NTRK3Q16288 839 aa13.13□□□□□ -0.31
PTPN20-204ENST00000374346 ISM2Q6H9L7 571 aa13.13□□□□□ -0.31
PTPN20-204ENST00000374346 KRBA2Q6ZNG9 492 aa13.13□□□□□ -0.31
PTPN20-204ENST00000374346 CCDC34Q96HJ3 373 aa13.13□□□□□ -0.31
PTPN20-204ENST00000374346 SLC26A6Q9BXS9 759 aa13.13□□□□□ -0.31
PTPN20-204ENST00000374346 L2HGDHQ9H9P8 463 aa13.13□□□□□ -0.31
PTPN20-204ENST00000374346 ASAP1Q9ULH1 1129 aa13.13□□□□□ -0.31
PTPN20-204ENST00000374346 MORC2Q9Y6X9 1032 aaPredicted RBP13.13□□□□□ -0.31
PTPN20-204ENST00000374346 ECM29Q5VYK3 1845 aa13.13□□□□□ -0.31
PTPN20-204ENST00000374346 UBN2Q6ZU65 1347 aa13.12□□□□□ -0.31
PTPN20-204ENST00000374346 ZSCAN12O43309 604 aa13.12□□□□□ -0.31
PTPN20-204ENST00000374346 FMNL1O95466 1100 aaPredicted RBP13.12□□□□□ -0.31
PTPN20-204ENST00000374346 PNOCQ13519 176 aa13.12□□□□□ -0.31
PTPN20-204ENST00000374346 NAA30Q147X3 362 aaPredicted RBP13.12□□□□□ -0.31
PTPN20-204ENST00000374346 RILPL1Q5EBL4 403 aa13.12□□□□□ -0.31
PTPN20-204ENST00000374346 SYT10Q6XYQ8 523 aa13.12□□□□□ -0.31
PTPN20-204ENST00000374346 MFSD6Q6ZSS7 791 aa13.12□□□□□ -0.31
PTPN20-204ENST00000374346 NOSTRINQ8IVI9 506 aa13.12□□□□□ -0.31
PTPN20-204ENST00000374346 IFNL3Q8IZI9 196 aa13.12□□□□□ -0.31
PTPN20-204ENST00000374346 TMTC2Q8N394 836 aa13.12□□□□□ -0.31
PTPN20-204ENST00000374346 SPATA5Q8NB90 893 aa13.12□□□□□ -0.31
PTPN20-204ENST00000374346 PIGBQ92521 554 aa13.12□□□□□ -0.31
PTPN20-204ENST00000374346 AK7Q96M32 723 aa13.12□□□□□ -0.31
PTPN20-204ENST00000374346 TAOK2Q9UL54 1235 aa13.12□□□□□ -0.31
PTPN20-204ENST00000374346 SOS2Q07890 1332 aaPredicted RBP13.12□□□□□ -0.31
PTPN20-204ENST00000374346 TCRBV5S4A2TA0A5A2 114 aa13.12□□□□□ -0.31
PTPN20-204ENST00000374346 PHKA1P46020 1223 aa13.12□□□□□ -0.31
PTPN20-204ENST00000374346 GABPB1Q06547 395 aaPredicted RBP13.12□□□□□ -0.31
PTPN20-204ENST00000374346 HLFQ16534 295 aa13.12□□□□□ -0.31
PTPN20-204ENST00000374346 FCHSD1Q86WN1 690 aa13.12□□□□□ -0.31
PTPN20-204ENST00000374346 KRT222Q8N1A0 295 aa13.12□□□□□ -0.31
PTPN20-204ENST00000374346 CEP131Q9UPN4 1083 aa13.12□□□□□ -0.31
PTPN20-204ENST00000374346 PHLPP2Q6ZVD8 1323 aa13.11□□□□□ -0.31
PTPN20-204ENST00000374346 ATP1A3P13637 1013 aa13.11□□□□□ -0.31
PTPN20-204ENST00000374346 IFNAR1P17181 557 aa13.11□□□□□ -0.31
PTPN20-204ENST00000374346 ELF2Q15723 593 aa13.11□□□□□ -0.31
PTPN20-204ENST00000374346 AKNAD1Q5T1N1 836 aa13.11□□□□□ -0.31
PTPN20-204ENST00000374346 MTA3Q9BTC8 594 aa13.11□□□□□ -0.31
PTPN20-204ENST00000374346 SRRTQ9BXP5 876 aaKnown RBP13.11□□□□□ -0.31
PTPN20-204ENST00000374346 WWC3Q9ULE0 1092 aa13.11□□□□□ -0.31
PTPN20-204ENST00000374346 ERVV-1B6SEH8 477 aa13.11□□□□□ -0.31
PTPN20-204ENST00000374346 ETF1P62495 437 aaKnown RBP13.11□□□□□ -0.31
PTPN20-204ENST00000374346 KANK3Q6NY19 840 aa13.11□□□□□ -0.31
PTPN20-204ENST00000374346 VSTM4Q8IW00 320 aa13.11□□□□□ -0.31
PTPN20-204ENST00000374346 SYNE4Q8N205 404 aa13.11□□□□□ -0.31
PTPN20-204ENST00000374346 MAGEB6Q8N7X4 407 aa13.11□□□□□ -0.31
PTPN20-204ENST00000374346 FOXP1Q9H334 677 aaPredicted RBP13.11□□□□□ -0.31
PTPN20-204ENST00000374346 ZSWIM5Q9P217 1185 aa13.11□□□□□ -0.31
PTPN20-204ENST00000374346 DENND2AQ9ULE3 1009 aa13.11□□□□□ -0.31
PTPN20-204ENST00000374346 NUP98P52948 1817 aa13.1□□□□□ -0.31
PTPN20-204ENST00000374346 ARAP2Q8WZ64 1704 aa13.1□□□□□ -0.31
PTPN20-204ENST00000374346 GOLGA6L9A6NEM1 432 aa13.1□□□□□ -0.31
PTPN20-204ENST00000374346 RANBP6O60518 1105 aaKnown RBP13.1□□□□□ -0.31
PTPN20-204ENST00000374346 MMP1P03956 469 aa13.1□□□□□ -0.31
PTPN20-204ENST00000374346 LONRF3Q496Y0 759 aa13.1□□□□□ -0.31
PTPN20-204ENST00000374346 KMT5BQ4FZB7 885 aa13.1□□□□□ -0.31
PTPN20-204ENST00000374346 METTL16Q86W50 562 aaKnown RBP13.1□□□□□ -0.31
PTPN20-204ENST00000374346 CLIC6Q96NY7 704 aa13.1□□□□□ -0.31
PTPN20-204ENST00000374346 RNF41Q9H4P4 317 aaPredicted RBP13.1□□□□□ -0.31
PTPN20-204ENST00000374346 NID2Q14112 1375 aa13.1□□□□□ -0.31
PTPN20-204ENST00000374346 ITGB4P16144 1822 aa13.1□□□□□ -0.31
PTPN20-204ENST00000374346 MBD4O95243 580 aa13.1□□□□□ -0.31
PTPN20-204ENST00000374346 DEXIO95424 95 aa13.1□□□□□ -0.31
PTPN20-204ENST00000374346 TDO2P48775 406 aa13.1□□□□□ -0.31
PTPN20-204ENST00000374346 RCAN1P53805 252 aa13.1□□□□□ -0.31
PTPN20-204ENST00000374346 WTAPQ15007 396 aa13.1□□□□□ -0.31
PTPN20-204ENST00000374346 RTN1Q16799 776 aa13.1□□□□□ -0.31
PTPN20-204ENST00000374346 MLKLQ8NB16 471 aa13.1□□□□□ -0.31
PTPN20-204ENST00000374346 MPHOSPH8Q99549 860 aa13.1□□□□□ -0.31
PTPN20-204ENST00000374346 HSD3B7Q9H2F3 369 aa13.1□□□□□ -0.31
PTPN20-204ENST00000374346 TOMM22Q9NS69 142 aa13.1□□□□□ -0.31
PTPN20-204ENST00000374346 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.1□□□□□ -0.31
PTPN20-204ENST00000374346 PCDHA5Q9Y5H7 936 aa13.1□□□□□ -0.31
PTPN20-204ENST00000374346 V9GYY5 206 aaPredicted RBP13.1□□□□□ -0.31
PTPN20-204ENST00000374346 ARHGAP6O43182 974 aa13.09□□□□□ -0.31
PTPN20-204ENST00000374346 CDK11BP21127 795 aaKnown RBP13.09□□□□□ -0.31
PTPN20-204ENST00000374346 TRIML1Q8N9V2 468 aa13.09□□□□□ -0.31
PTPN20-204ENST00000374346 MYL10Q9BUA6 226 aa13.09□□□□□ -0.31
PTPN20-204ENST00000374346 SENP2Q9HC62 589 aa13.09□□□□□ -0.31
PTPN20-204ENST00000374346 FAM217BQ9NTX9 383 aaPredicted RBP13.09□□□□□ -0.31
PTPN20-204ENST00000374346 FANCLQ9NW38 375 aa13.09□□□□□ -0.31
PTPN20-204ENST00000374346 ARGLU1Q9NWB6 273 aaPredicted RBP13.09□□□□□ -0.31
PTPN20-204ENST00000374346 DOCK2Q92608 1830 aa13.09□□□□□ -0.31
PTPN20-204ENST00000374346 KAT6BQ8WYB5 2073 aa13.09□□□□□ -0.31
PTPN20-204ENST00000374346 LRP6O75581 1613 aa13.09□□□□□ -0.31
PTPN20-204ENST00000374346 ABCA3Q99758 1704 aa13.09□□□□□ -0.31
PTPN20-204ENST00000374346 XBP1P17861 261 aa13.08□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms