RNA–Protein interactions for RNA: ENST00000373485.5

RBBP4-201, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RBBP4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-201ENST00000373485 MAP3K12Q12852 859 aa11.18□□□□□ -0.62
RBBP4-201ENST00000373485 ANGEL2Q5VTE6 544 aaKnown RBP11.18□□□□□ -0.62
RBBP4-201ENST00000373485 GPR153Q6NV75 609 aa11.18□□□□□ -0.62
RBBP4-201ENST00000373485 HHIPL2Q6UWX4 724 aa11.18□□□□□ -0.62
RBBP4-201ENST00000373485 SLF2Q8IX21 1173 aa11.18□□□□□ -0.62
RBBP4-201ENST00000373485 MAGEB6Q8N7X4 407 aa11.18□□□□□ -0.62
RBBP4-201ENST00000373485 MTMR14Q8NCE2 650 aa11.18□□□□□ -0.62
RBBP4-201ENST00000373485 PTCD2Q8WV60 388 aaKnown RBP11.18□□□□□ -0.62
RBBP4-201ENST00000373485 DCPSQ96C86 337 aaKnown RBP11.18□□□□□ -0.62
RBBP4-201ENST00000373485 ZBED3Q96IU2 234 aaPredicted RBP11.18□□□□□ -0.62
RBBP4-201ENST00000373485 ZDHHC15Q96MV8 337 aa11.18□□□□□ -0.62
RBBP4-201ENST00000373485 MRIQ9BWK5 157 aa11.18□□□□□ -0.62
RBBP4-201ENST00000373485 TDRD3Q9H7E2 651 aaKnown RBP11.18□□□□□ -0.62
RBBP4-201ENST00000373485 GGA3Q9NZ52 723 aa11.18□□□□□ -0.62
RBBP4-201ENST00000373485 MYO1BO43795 1136 aa11.17□□□□□ -0.62
RBBP4-201ENST00000373485 LDHCP07864 332 aa11.17□□□□□ -0.62
RBBP4-201ENST00000373485 CYP7A1P22680 504 aa11.17□□□□□ -0.62
RBBP4-201ENST00000373485 APOBEC3HQ6NTF7 200 aaKnown RBP11.17□□□□□ -0.62
RBBP4-201ENST00000373485 CNTROBQ8N137 903 aa11.17□□□□□ -0.62
RBBP4-201ENST00000373485 RBM46Q8TBY0 533 aaKnown RBP11.17□□□□□ -0.62
RBBP4-201ENST00000373485 ZC3H15Q8WU90 426 aaKnown RBP11.17□□□□□ -0.62
RBBP4-201ENST00000373485 VEZTQ9HBM0 779 aa11.17□□□□□ -0.62
RBBP4-201ENST00000373485 TSHZ2Q9NRE2 1034 aa11.17□□□□□ -0.62
RBBP4-201ENST00000373485 MYH2Q9UKX2 1941 aa11.16□□□□□ -0.62
RBBP4-201ENST00000373485 MROH7-TTC4A0A0A0MT08 1334 aa11.16□□□□□ -0.62
RBBP4-201ENST00000373485 CHGBP05060 677 aa11.16□□□□□ -0.62
RBBP4-201ENST00000373485 CACNB3P54284 484 aa11.16□□□□□ -0.62
RBBP4-201ENST00000373485 SLFNL1Q499Z3 407 aa11.16□□□□□ -0.62
RBBP4-201ENST00000373485 SLC9C2Q5TAH2 1124 aa11.16□□□□□ -0.62
RBBP4-201ENST00000373485 DLK2Q6UY11 383 aa11.16□□□□□ -0.62
RBBP4-201ENST00000373485 ADGRA1Q86SQ6 560 aa11.16□□□□□ -0.62
RBBP4-201ENST00000373485 USP48Q86UV5 1035 aa11.16□□□□□ -0.62
RBBP4-201ENST00000373485 SMC1BQ8NDV3 1235 aa11.16□□□□□ -0.62
RBBP4-201ENST00000373485 GLIS2Q9BZE0 524 aaPredicted RBP11.16□□□□□ -0.62
RBBP4-201ENST00000373485 OSBPL3Q9H4L5 887 aa11.16□□□□□ -0.62
RBBP4-201ENST00000373485 USP40Q9NVE5 1235 aa11.16□□□□□ -0.62
RBBP4-201ENST00000373485 ZNF70Q9UC06 446 aaPredicted RBP11.16□□□□□ -0.62
RBBP4-201ENST00000373485 PGAP2Q9UHJ9 254 aa11.16□□□□□ -0.62
RBBP4-201ENST00000373485 GAKO14976 1311 aa11.15□□□□□ -0.62
RBBP4-201ENST00000373485 ZNF532Q9HCE3 1301 aa11.15□□□□□ -0.62
RBBP4-201ENST00000373485 TRIM6-TRIM34B2RNG4 842 aa11.15□□□□□ -0.62
RBBP4-201ENST00000373485 TCP10L2B9ZVM9 353 aa11.15□□□□□ -0.62
RBBP4-201ENST00000373485 ADM5C9JUS6 153 aa11.15□□□□□ -0.62
RBBP4-201ENST00000373485 PDE6AP16499 860 aa11.15□□□□□ -0.62
RBBP4-201ENST00000373485 BTDP43251 543 aa11.15□□□□□ -0.62
RBBP4-201ENST00000373485 FMR1Q06787 632 aaKnown RBP eCLIP11.15□□□□□ -0.621e-8■■■■■ 29.3
RBBP4-201ENST00000373485 KRT26Q7Z3Y9 468 aa11.15□□□□□ -0.62
RBBP4-201ENST00000373485 SULF1Q8IWU6 871 aa11.15□□□□□ -0.62
RBBP4-201ENST00000373485 KBTBD3Q8NAB2 608 aa11.15□□□□□ -0.62
RBBP4-201ENST00000373485 MIGA1Q8NAN2 632 aa11.15□□□□□ -0.62
RBBP4-201ENST00000373485 FSD1Q9BTV5 496 aa11.15□□□□□ -0.62
RBBP4-201ENST00000373485 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.15□□□□□ -0.623e-7■□□□□ 10.1
RBBP4-201ENST00000373485 AATFQ9NY61 560 aaKnown RBP eCLIP11.15□□□□□ -0.62
RBBP4-201ENST00000373485 DOCK2Q92608 1830 aa11.15□□□□□ -0.63
RBBP4-201ENST00000373485 GPR75-ASB3A0A0A6YYF3 556 aa11.14□□□□□ -0.63
RBBP4-201ENST00000373485 TRAF5O00463 557 aa11.14□□□□□ -0.63
RBBP4-201ENST00000373485 RGS3P49796 1198 aa11.14□□□□□ -0.63
RBBP4-201ENST00000373485 CDC42EP5Q6NZY7 148 aa11.14□□□□□ -0.63
RBBP4-201ENST00000373485 CDC37L1Q7L3B6 337 aa11.14□□□□□ -0.63
RBBP4-201ENST00000373485 RILPL2Q969X0 211 aa11.14□□□□□ -0.63
RBBP4-201ENST00000373485 NOL10Q9BSC4 688 aaKnown RBP11.14□□□□□ -0.63
RBBP4-201ENST00000373485 TMOD2Q9NZR1 351 aa11.14□□□□□ -0.63
RBBP4-201ENST00000373485 MAST2Q6P0Q8 1798 aa11.14□□□□□ -0.63
RBBP4-201ENST00000373485 PITPNM2Q9BZ72 1349 aa11.13□□□□□ -0.63
RBBP4-201ENST00000373485 POLR2AP24928 1970 aaKnown RBP11.13□□□□□ -0.63
RBBP4-201ENST00000373485 BAG3O95817 575 aa11.13□□□□□ -0.63
RBBP4-201ENST00000373485 ADD2P35612 726 aa11.13□□□□□ -0.63
RBBP4-201ENST00000373485 DYNLL1P63167 89 aaKnown RBP11.13□□□□□ -0.63
RBBP4-201ENST00000373485 FSTL1Q12841 308 aa11.13□□□□□ -0.63
RBBP4-201ENST00000373485 CAMK2BQ13554 666 aa11.13□□□□□ -0.63
RBBP4-201ENST00000373485 TTC22Q5TAA0 569 aa11.13□□□□□ -0.63
RBBP4-201ENST00000373485 PRAMEF18Q5VWM3 479 aa11.13□□□□□ -0.63
RBBP4-201ENST00000373485 ZSCAN25Q6NSZ9 544 aa11.13□□□□□ -0.63
RBBP4-201ENST00000373485 APOBEC3FQ8IUX4 373 aaKnown RBP11.13□□□□□ -0.63
RBBP4-201ENST00000373485 SH3RF3Q8TEJ3 882 aaPredicted RBP11.13□□□□□ -0.63
RBBP4-201ENST00000373485 EVI5LQ96CN4 794 aa11.13□□□□□ -0.63
RBBP4-201ENST00000373485 TCRBV5S4A2TA0A5A2 114 aa11.12□□□□□ -0.63
RBBP4-201ENST00000373485 RNF113AO15541 343 aaKnown RBP11.12□□□□□ -0.63
RBBP4-201ENST00000373485 IGSF3O75054 1194 aa11.12□□□□□ -0.63
RBBP4-201ENST00000373485 ITGBL1O95965 494 aaPredicted RBP11.12□□□□□ -0.63
RBBP4-201ENST00000373485 TCP10Q12799 353 aa11.12□□□□□ -0.63
RBBP4-201ENST00000373485 NFIAQ12857 509 aa11.12□□□□□ -0.63
RBBP4-201ENST00000373485 RASA3Q14644 834 aa11.12□□□□□ -0.63
RBBP4-201ENST00000373485 OXER1Q8TDS5 423 aa11.12□□□□□ -0.63
RBBP4-201ENST00000373485 DEFB129Q9H1M3 183 aa11.12□□□□□ -0.63
RBBP4-201ENST00000373485 ZNF408Q9H9D4 720 aa11.12□□□□□ -0.63
RBBP4-201ENST00000373485 PCDHGA4Q9Y5G9 962 aa11.12□□□□□ -0.63
RBBP4-201ENST00000373485 ECM29Q5VYK3 1845 aa11.11□□□□□ -0.63
RBBP4-201ENST00000373485 MAGEB6P1A0A0J9YX57 407 aa11.11□□□□□ -0.63
RBBP4-201ENST00000373485 GSPT1P15170 499 aaKnown RBP11.11□□□□□ -0.63
RBBP4-201ENST00000373485 RHBDL3P58872 404 aa11.11□□□□□ -0.63
RBBP4-201ENST00000373485 PICALMQ13492 652 aa11.11□□□□□ -0.63
RBBP4-201ENST00000373485 TNFAIP1Q13829 316 aa11.11□□□□□ -0.63
RBBP4-201ENST00000373485 UBE3CQ15386 1083 aa11.11□□□□□ -0.63
RBBP4-201ENST00000373485 TEX11Q8IYF3 940 aa11.11□□□□□ -0.63
RBBP4-201ENST00000373485 ZFYP08048 801 aaPredicted RBP11.1□□□□□ -0.63
RBBP4-201ENST00000373485 SDSP20132 328 aa11.1□□□□□ -0.63
RBBP4-201ENST00000373485 TNNI2P48788 182 aa11.1□□□□□ -0.63
RBBP4-201ENST00000373485 PPP4CP60510 307 aa11.1□□□□□ -0.63
RBBP4-201ENST00000373485 LRRFIP1Q32MZ4 808 aaKnown RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms