RNA–Protein interactions for RNA: ENST00000373386.6

GARNL3-201, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 3,143 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-201ENST00000373386 CPA1P15085 419 aa9.4□□□□□ -0.9
GARNL3-201ENST00000373386 FOSBP53539 338 aa9.4□□□□□ -0.9
GARNL3-201ENST00000373386 CCDC191Q8NCU4 936 aa9.4□□□□□ -0.9
GARNL3-201ENST00000373386 MYD88Q99836 296 aa9.4□□□□□ -0.9
GARNL3-201ENST00000373386 AGXT2Q9BYV1 514 aa9.4□□□□□ -0.9
GARNL3-201ENST00000373386 KCNF1Q9H3M0 494 aa9.4□□□□□ -0.9
GARNL3-201ENST00000373386 RABL2BQ9UNT1 228 aa9.4□□□□□ -0.9
GARNL3-201ENST00000373386 RRP15Q9Y3B9 282 aaKnown RBP9.4□□□□□ -0.9
GARNL3-201ENST00000373386 PCDH11XQ9BZA7 1347 aa9.4□□□□□ -0.9
GARNL3-201ENST00000373386 PCDH11YQ9BZA8 1340 aa9.4□□□□□ -0.9
GARNL3-201ENST00000373386 TIMM44O43615 452 aa9.4□□□□□ -0.9
GARNL3-201ENST00000373386 TOB2Q14106 344 aaPredicted RBP9.4□□□□□ -0.9
GARNL3-201ENST00000373386 TEX35Q5T0J7 233 aa9.4□□□□□ -0.9
GARNL3-201ENST00000373386 TTC30AQ86WT1 665 aa9.4□□□□□ -0.9
GARNL3-201ENST00000373386 DSCC1Q9BVC3 393 aa9.4□□□□□ -0.9
GARNL3-201ENST00000373386 ZSCAN16Q9H4T2 348 aaPredicted RBP9.4□□□□□ -0.9
GARNL3-201ENST00000373386 RETREG1Q9H6L5 497 aa9.4□□□□□ -0.9
GARNL3-201ENST00000373386 DBNLQ9UJU6 430 aaKnown RBP9.4□□□□□ -0.9
GARNL3-201ENST00000373386 THRAP3Q9Y2W1 955 aaKnown RBP9.4□□□□□ -0.9
GARNL3-201ENST00000373386 CYP27B1O15528 508 aa9.4□□□□□ -0.91
GARNL3-201ENST00000373386 AP5Z1O43299 807 aa9.4□□□□□ -0.91
GARNL3-201ENST00000373386 SNUPNO95149 360 aaKnown RBP9.4□□□□□ -0.91
GARNL3-201ENST00000373386 MCMDC2Q4G0Z9 681 aa9.4□□□□□ -0.91
GARNL3-201ENST00000373386 EPHA10Q5JZY3 1008 aa9.4□□□□□ -0.91
GARNL3-201ENST00000373386 LARP1BQ659C4 914 aaKnown RBP9.4□□□□□ -0.91
GARNL3-201ENST00000373386 TEX11Q8IYF3 940 aa9.4□□□□□ -0.91
GARNL3-201ENST00000373386 TTC30BQ8N4P2 665 aa9.4□□□□□ -0.91
GARNL3-201ENST00000373386 BICD1Q96G01 975 aa9.4□□□□□ -0.91
GARNL3-201ENST00000373386 AGBL1Q96MI9 1066 aa9.4□□□□□ -0.91
GARNL3-201ENST00000373386 TRAIPQ9BWF2 469 aa9.4□□□□□ -0.91
GARNL3-201ENST00000373386 TLR7Q9NYK1 1049 aaKnown RBP9.4□□□□□ -0.91
GARNL3-201ENST00000373386 PYCARDQ9ULZ3 195 aa9.4□□□□□ -0.91
GARNL3-201ENST00000373386 ZNF609O15014 1411 aa9.39□□□□□ -0.91
GARNL3-201ENST00000373386 LRP6O75581 1613 aa9.39□□□□□ -0.91
GARNL3-201ENST00000373386 VCAM1P19320 739 aa9.39□□□□□ -0.91
GARNL3-201ENST00000373386 EIF5P55010 431 aaKnown RBP9.39□□□□□ -0.91
GARNL3-201ENST00000373386 TBC1D8BQ0IIM8 1120 aa9.39□□□□□ -0.91
GARNL3-201ENST00000373386 KBTBD3Q8NAB2 608 aa9.39□□□□□ -0.91
GARNL3-201ENST00000373386 STAG1Q8WVM7 1258 aa9.39□□□□□ -0.91
GARNL3-201ENST00000373386 GTF3C6Q969F1 213 aa9.39□□□□□ -0.91
GARNL3-201ENST00000373386 RMDN2Q96LZ7 410 aa9.39□□□□□ -0.91
GARNL3-201ENST00000373386 PLEKHG4BQ96PX9 1271 aa9.39□□□□□ -0.91
GARNL3-201ENST00000373386 CCDC8Q9H0W5 538 aaPredicted RBP9.39□□□□□ -0.91
GARNL3-201ENST00000373386 TSPYL2Q9H2G4 693 aaPredicted RBP9.39□□□□□ -0.91
GARNL3-201ENST00000373386 NLRP2Q9NX02 1062 aa9.39□□□□□ -0.91
GARNL3-201ENST00000373386 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.39□□□□□ -0.91
GARNL3-201ENST00000373386 VDRP11473 427 aa9.39□□□□□ -0.91
GARNL3-201ENST00000373386 XBP1P17861 261 aa9.39□□□□□ -0.91
GARNL3-201ENST00000373386 IL15P40933 162 aaPredicted RBP9.39□□□□□ -0.91
GARNL3-201ENST00000373386 TYRO3Q06418 890 aa9.39□□□□□ -0.91
GARNL3-201ENST00000373386 KCNA1Q09470 495 aa9.39□□□□□ -0.91
GARNL3-201ENST00000373386 ZNF394Q53GI3 561 aa9.39□□□□□ -0.91
GARNL3-201ENST00000373386 KCNV1Q6PIU1 500 aa9.39□□□□□ -0.91
GARNL3-201ENST00000373386 TTC6Q86TZ1 520 aa9.39□□□□□ -0.91
GARNL3-201ENST00000373386 TRIM42Q8IWZ5 723 aa9.39□□□□□ -0.91
GARNL3-201ENST00000373386 YIPF2Q9BWQ6 316 aa9.39□□□□□ -0.91
GARNL3-201ENST00000373386 DDX19AQ9NUU7 478 aaKnown RBP9.39□□□□□ -0.91
GARNL3-201ENST00000373386 USP8P40818 1118 aa9.38□□□□□ -0.91
GARNL3-201ENST00000373386 FOXO4P98177 505 aa9.38□□□□□ -0.91
GARNL3-201ENST00000373386 AIMP1Q12904 312 aaKnown RBP9.38□□□□□ -0.91
GARNL3-201ENST00000373386 PRPF4BQ13523 1007 aaKnown RBP9.38□□□□□ -0.91
GARNL3-201ENST00000373386 FILIP1LQ4L180 1135 aa9.38□□□□□ -0.91
GARNL3-201ENST00000373386 CCDC70Q6NSX1 233 aa9.38□□□□□ -0.91
GARNL3-201ENST00000373386 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.38□□□□□ -0.91
GARNL3-201ENST00000373386 SPC24Q8NBT2 197 aa9.38□□□□□ -0.91
GARNL3-201ENST00000373386 SMARCC2Q8TAQ2 1214 aa9.38□□□□□ -0.91
GARNL3-201ENST00000373386 NEK1Q96PY6 1258 aa9.38□□□□□ -0.91
GARNL3-201ENST00000373386 TRIM6Q9C030 488 aaPredicted RBP9.38□□□□□ -0.91
GARNL3-201ENST00000373386 BOLA2Q9H3K6 86 aa9.38□□□□□ -0.91
GARNL3-201ENST00000373386 GNL3LQ9NVN8 582 aaKnown RBP9.38□□□□□ -0.91
GARNL3-201ENST00000373386 FAM177BA6PVY3 158 aa9.38□□□□□ -0.91
GARNL3-201ENST00000373386 PRPHP41219 470 aa9.38□□□□□ -0.91
GARNL3-201ENST00000373386 LRRFIP1Q32MZ4 808 aaKnown RBP9.38□□□□□ -0.91
GARNL3-201ENST00000373386 CDC37L1Q7L3B6 337 aa9.38□□□□□ -0.91
GARNL3-201ENST00000373386 TNMDQ9H2S6 317 aa9.38□□□□□ -0.91
GARNL3-201ENST00000373386 UNC45AQ9H3U1 944 aa9.38□□□□□ -0.91
GARNL3-201ENST00000373386 WDR17Q8IZU2 1322 aa9.38□□□□□ -0.91
GARNL3-201ENST00000373386 GOLGA6L4A6NEF3 574 aa9.38□□□□□ -0.91
GARNL3-201ENST00000373386 CABP4P57796 275 aa9.38□□□□□ -0.91
GARNL3-201ENST00000373386 SESN3P58005 492 aa9.38□□□□□ -0.91
GARNL3-201ENST00000373386 TFCP2Q12800 502 aa9.38□□□□□ -0.91
GARNL3-201ENST00000373386 GRIK3Q13003 919 aa9.38□□□□□ -0.91
GARNL3-201ENST00000373386 TRIM28Q13263 835 aaKnown RBP9.38□□□□□ -0.91
GARNL3-201ENST00000373386 SLC39A6Q13433 755 aa9.38□□□□□ -0.91
GARNL3-201ENST00000373386 NAA16Q6N069 864 aaPredicted RBP9.38□□□□□ -0.91
GARNL3-201ENST00000373386 ARL10Q8N8L6 244 aa9.38□□□□□ -0.91
GARNL3-201ENST00000373386 ZNF483Q8TF39 744 aaPredicted RBP9.38□□□□□ -0.91
GARNL3-201ENST00000373386 USP16Q9Y5T5 823 aa9.38□□□□□ -0.91
GARNL3-201ENST00000373386 COL5A2P05997 1499 aaPredicted RBP9.37□□□□□ -0.91
GARNL3-201ENST00000373386 ABL2P42684 1182 aa9.37□□□□□ -0.91
GARNL3-201ENST00000373386 EVCP57679 992 aa9.37□□□□□ -0.91
GARNL3-201ENST00000373386 PDIA5Q14554 519 aa9.37□□□□□ -0.91
GARNL3-201ENST00000373386 GJC2Q5T442 439 aaPredicted RBP9.37□□□□□ -0.91
GARNL3-201ENST00000373386 ZNF589Q86UQ0 364 aaPredicted RBP9.37□□□□□ -0.91
GARNL3-201ENST00000373386 NECAB1Q8N987 351 aa9.37□□□□□ -0.91
GARNL3-201ENST00000373386 ARMC2Q8NEN0 867 aa9.37□□□□□ -0.91
GARNL3-201ENST00000373386 RSPH1Q8WYR4 309 aa9.37□□□□□ -0.91
GARNL3-201ENST00000373386 PLA2G12BQ9BX93 195 aa9.37□□□□□ -0.91
GARNL3-201ENST00000373386 PFKFB2O60825 505 aa9.37□□□□□ -0.91
GARNL3-201ENST00000373386 MYL6BP14649 208 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms