RNA–Protein interactions for RNA: ENST00000372396.3

KDM4A-201, Transcript of lysine demethylase 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM4A, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4A-201ENST00000372396 FAM107BQ9H098 131 aa11.49□□□□□ -0.57
KDM4A-201ENST00000372396 TFIP11Q9UBB9 837 aaKnown RBP11.49□□□□□ -0.57
KDM4A-201ENST00000372396 CNPY2Q9Y2B0 182 aa11.49□□□□□ -0.57
KDM4A-201ENST00000372396 SUSD4Q5VX71 490 aa11.49□□□□□ -0.57
KDM4A-201ENST00000372396 CEP57L1Q8IYX8 460 aa11.49□□□□□ -0.57
KDM4A-201ENST00000372396 SLC26A6Q9BXS9 759 aa11.49□□□□□ -0.57
KDM4A-201ENST00000372396 TRIM5Q9C035 493 aa11.49□□□□□ -0.57
KDM4A-201ENST00000372396 ZC3H12CQ9C0D7 883 aaKnown RBP11.49□□□□□ -0.57
KDM4A-201ENST00000372396 DACH1Q9UI36 760 aa11.49□□□□□ -0.57
KDM4A-201ENST00000372396 HSPD1P10809 573 aaKnown RBP11.48□□□□□ -0.57
KDM4A-201ENST00000372396 IFIT1BQ5T764 474 aaKnown RBP11.48□□□□□ -0.57
KDM4A-201ENST00000372396 ATL3Q6DD88 541 aa11.48□□□□□ -0.57
KDM4A-201ENST00000372396 GBP6Q6ZN66 633 aa11.48□□□□□ -0.57
KDM4A-201ENST00000372396 CRACR2BQ8N4Y2 399 aaPredicted RBP11.48□□□□□ -0.57
KDM4A-201ENST00000372396 UBXN4Q92575 508 aa11.48□□□□□ -0.57
KDM4A-201ENST00000372396 ALG1Q9BT22 464 aa11.48□□□□□ -0.57
KDM4A-201ENST00000372396 ARMT1Q9H993 441 aa11.48□□□□□ -0.57
KDM4A-201ENST00000372396 SPTLC3Q9NUV7 552 aa11.48□□□□□ -0.57
KDM4A-201ENST00000372396 GGA1Q9UJY5 639 aa11.48□□□□□ -0.57
KDM4A-201ENST00000372396 COL15A1P39059 1388 aa11.48□□□□□ -0.57
KDM4A-201ENST00000372396 E7EWF7 191 aa11.48□□□□□ -0.57
KDM4A-201ENST00000372396 NEBLO76041 1014 aa11.48□□□□□ -0.57
KDM4A-201ENST00000372396 PDE6AP16499 860 aa11.48□□□□□ -0.57
KDM4A-201ENST00000372396 HSP90B2PQ58FF3 399 aa11.48□□□□□ -0.57
KDM4A-201ENST00000372396 SEMA3FQ13275 785 aa11.48□□□□□ -0.57
KDM4A-201ENST00000372396 MICALL1Q8N3F8 863 aa11.48□□□□□ -0.57
KDM4A-201ENST00000372396 GOLGA5Q8TBA6 731 aa11.48□□□□□ -0.57
KDM4A-201ENST00000372396 ERO1AQ96HE7 468 aa11.48□□□□□ -0.57
KDM4A-201ENST00000372396 CPSF2Q9P2I0 782 aaKnown RBP11.48□□□□□ -0.57
KDM4A-201ENST00000372396 SEC63Q9UGP8 760 aaKnown RBP11.48□□□□□ -0.57
KDM4A-201ENST00000372396 SEMA3EO15041 775 aa11.47□□□□□ -0.57
KDM4A-201ENST00000372396 CTIFO43310 598 aaKnown RBP11.47□□□□□ -0.57
KDM4A-201ENST00000372396 UFL1O94874 794 aa11.47□□□□□ -0.57
KDM4A-201ENST00000372396 HLA-DOAP06340 250 aa11.47□□□□□ -0.57
KDM4A-201ENST00000372396 CHST3Q7LGC8 479 aa11.47□□□□□ -0.57
KDM4A-201ENST00000372396 RGPD8O14715 1765 aaPredicted RBP11.47□□□□□ -0.57
KDM4A-201ENST00000372396 BRD1O95696 1058 aa11.47□□□□□ -0.57
KDM4A-201ENST00000372396 GNAQP50148 359 aa11.47□□□□□ -0.57
KDM4A-201ENST00000372396 DHX8Q14562 1220 aaKnown RBP11.47□□□□□ -0.57
KDM4A-201ENST00000372396 ZNF772Q68DY9 489 aaPredicted RBP11.47□□□□□ -0.57
KDM4A-201ENST00000372396 CCDC144CPQ8IYA2 1237 aa11.47□□□□□ -0.57
KDM4A-201ENST00000372396 SEPT12Q8IYM1 358 aa11.47□□□□□ -0.57
KDM4A-201ENST00000372396 RASEFQ8IZ41 740 aa11.47□□□□□ -0.57
KDM4A-201ENST00000372396 SEC62Q99442 399 aaKnown RBP11.47□□□□□ -0.57
KDM4A-201ENST00000372396 ACBD3Q9H3P7 528 aa11.47□□□□□ -0.57
KDM4A-201ENST00000372396 ANGEL1Q9UNK9 670 aaKnown RBP11.47□□□□□ -0.57
KDM4A-201ENST00000372396 SLU7O95391 586 aaKnown RBP11.47□□□□□ -0.57
KDM4A-201ENST00000372396 NF2P35240 595 aa11.47□□□□□ -0.57
KDM4A-201ENST00000372396 PHKA1P46020 1223 aa11.47□□□□□ -0.57
KDM4A-201ENST00000372396 DNM1Q05193 864 aaKnown RBP11.47□□□□□ -0.57
KDM4A-201ENST00000372396 ELF2Q15723 593 aa11.47□□□□□ -0.57
KDM4A-201ENST00000372396 RAB11FIP4Q86YS3 637 aa11.47□□□□□ -0.57
KDM4A-201ENST00000372396 RNF217Q8TC41 542 aa11.47□□□□□ -0.57
KDM4A-201ENST00000372396 PPP1R12AO14974 1030 aaPredicted RBP11.47□□□□□ -0.57
KDM4A-201ENST00000372396 TMEM63CQ9P1W3 806 aa11.47□□□□□ -0.57
KDM4A-201ENST00000372396 ABCC12Q96J65 1359 aa11.46□□□□□ -0.57
KDM4A-201ENST00000372396 CUL4AQ13619 759 aa11.46□□□□□ -0.57
KDM4A-201ENST00000372396 HOMER1Q86YM7 354 aa11.46□□□□□ -0.57
KDM4A-201ENST00000372396 CCDC82Q8N4S0 544 aa11.46□□□□□ -0.57
KDM4A-201ENST00000372396 KCNG4Q8TDN1 519 aa11.46□□□□□ -0.57
KDM4A-201ENST00000372396 MED4Q9NPJ6 270 aa11.46□□□□□ -0.57
KDM4A-201ENST00000372396 AFF2P51816 1311 aa11.46□□□□□ -0.57
KDM4A-201ENST00000372396 MAGEA9P43362 315 aa11.46□□□□□ -0.57
KDM4A-201ENST00000372396 KRT27Q7Z3Y8 459 aa11.46□□□□□ -0.57
KDM4A-201ENST00000372396 FSIP1Q8NA03 581 aa11.46□□□□□ -0.57
KDM4A-201ENST00000372396 CCDC12Q8WUD4 166 aaPredicted RBP11.46□□□□□ -0.57
KDM4A-201ENST00000372396 NARFQ9UHQ1 456 aa11.46□□□□□ -0.57
KDM4A-201ENST00000372396 ERFEQ4G0M1 354 aa11.46□□□□□ -0.58
KDM4A-201ENST00000372396 MUM1L1Q5H9M0 696 aa11.46□□□□□ -0.58
KDM4A-201ENST00000372396 AP1ARQ63HQ0 302 aa11.46□□□□□ -0.58
KDM4A-201ENST00000372396 BRAPQ7Z569 592 aa11.46□□□□□ -0.58
KDM4A-201ENST00000372396 MARCH10Q8NA82 808 aaPredicted RBP11.46□□□□□ -0.58
KDM4A-201ENST00000372396 MCM9Q9NXL9 1143 aa11.46□□□□□ -0.58
KDM4A-201ENST00000372396 STK32BQ9NY57 414 aa11.46□□□□□ -0.58
KDM4A-201ENST00000372396 CAVIN2O95810 425 aa11.45□□□□□ -0.58
KDM4A-201ENST00000372396 TSR1Q2NL82 804 aaKnown RBP11.45□□□□□ -0.58
KDM4A-201ENST00000372396 KIAA1524Q8TCG1 905 aa11.45□□□□□ -0.58
KDM4A-201ENST00000372396 ANO10Q9NW15 660 aa11.45□□□□□ -0.58
KDM4A-201ENST00000372396 ABCC6O95255 1503 aa11.45□□□□□ -0.58
KDM4A-201ENST00000372396 MAST3O60307 1309 aa11.45□□□□□ -0.58
KDM4A-201ENST00000372396 B4E1Z4 1266 aa11.45□□□□□ -0.58
KDM4A-201ENST00000372396 SMC2O95347 1197 aa11.45□□□□□ -0.58
KDM4A-201ENST00000372396 TSPY3P0CV98 308 aa11.45□□□□□ -0.58
KDM4A-201ENST00000372396 TSPY8P0CW00 308 aa11.45□□□□□ -0.58
KDM4A-201ENST00000372396 BCAMP50895 628 aa11.45□□□□□ -0.58
KDM4A-201ENST00000372396 EIF5P55010 431 aaKnown RBP11.45□□□□□ -0.58
KDM4A-201ENST00000372396 NLRP5P59047 1200 aa11.45□□□□□ -0.58
KDM4A-201ENST00000372396 NECTIN1Q15223 517 aa11.45□□□□□ -0.58
KDM4A-201ENST00000372396 ME3Q16798 604 aa11.45□□□□□ -0.58
KDM4A-201ENST00000372396 ZNF589Q86UQ0 364 aaPredicted RBP11.45□□□□□ -0.58
KDM4A-201ENST00000372396 FMNL3Q8IVF7 1028 aa11.45□□□□□ -0.58
KDM4A-201ENST00000372396 ZNF274Q96GC6 653 aaPredicted RBP11.45□□□□□ -0.58
KDM4A-201ENST00000372396 SEC31BQ9NQW1 1179 aa11.45□□□□□ -0.58
KDM4A-201ENST00000372396 PPP1R1BQ9UD71 204 aaPredicted RBP11.45□□□□□ -0.58
KDM4A-201ENST00000372396 LTN1O94822 1766 aa11.45□□□□□ -0.58
KDM4A-201ENST00000372396 CD2BP2O95400 341 aaKnown RBP11.45□□□□□ -0.58
KDM4A-201ENST00000372396 CAMK4Q16566 473 aa11.45□□□□□ -0.58
KDM4A-201ENST00000372396 SKIDA1Q1XH10 827 aa11.45□□□□□ -0.58
KDM4A-201ENST00000372396 BMP15O95972 392 aa11.45□□□□□ -0.58
KDM4A-201ENST00000372396 APBA3O96018 575 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms