RNA–Protein interactions for RNA: ENST00000371746.7

LHX3-201, Transcript of LIM homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LHX3, Length 2,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX3-201ENST00000371746 PRDM1O75626 825 aa27.71■■■□□ 2.03
LHX3-201ENST00000371746 SART3Q15020 963 aaKnown RBP27.71■■■□□ 2.03
LHX3-201ENST00000371746 CTR9Q6PD62 1173 aa27.71■■■□□ 2.03
LHX3-201ENST00000371746 TDRD7Q8NHU6 1098 aaKnown RBP27.71■■■□□ 2.03
LHX3-201ENST00000371746 USP17L12C9JPN9 530 aa27.71■■■□□ 2.03
LHX3-201ENST00000371746 USP17L21D6R901 530 aa27.71■■■□□ 2.03
LHX3-201ENST00000371746 WTAPQ15007 396 aa27.71■■■□□ 2.03
LHX3-201ENST00000371746 ZNF804AQ7Z570 1209 aa27.71■■■□□ 2.03
LHX3-201ENST00000371746 NTRK3Q16288 839 aa27.7■■■□□ 2.03
LHX3-201ENST00000371746 GRIK5Q16478 980 aa27.7■■■□□ 2.03
LHX3-201ENST00000371746 RANBP6O60518 1105 aaKnown RBP27.7■■■□□ 2.02
LHX3-201ENST00000371746 ERICH2A1L162 156 aa27.69■■■□□ 2.02
LHX3-201ENST00000371746 UBE2Q2LH0YL09 131 aa27.69■■■□□ 2.02
LHX3-201ENST00000371746 CDKL5O76039 1030 aa27.69■■■□□ 2.02
LHX3-201ENST00000371746 COL23A1Q86Y22 540 aaPredicted RBP27.69■■■□□ 2.02
LHX3-201ENST00000371746 ESR2Q92731 530 aa27.69■■■□□ 2.02
LHX3-201ENST00000371746 UBAC1Q9BSL1 405 aa27.69■■■□□ 2.02
LHX3-201ENST00000371746 CRNKL1Q9BZJ0 848 aaKnown RBP27.69■■■□□ 2.02
LHX3-201ENST00000371746 DCP1AQ9NPI6 582 aaPredicted RBP27.69■■■□□ 2.02
LHX3-201ENST00000371746 BAZ2AQ9UIF9 1905 aaKnown RBP27.69■■■□□ 2.02
LHX3-201ENST00000371746 POLR3DP05423 398 aaPredicted RBP27.69■■■□□ 2.02
LHX3-201ENST00000371746 CPLX2Q6PUV4 134 aaKnown RBP27.69■■■□□ 2.02
LHX3-201ENST00000371746 WDR66Q8TBY9 1149 aa27.69■■■□□ 2.02
LHX3-201ENST00000371746 ANP32BQ92688 251 aaKnown RBP27.69■■■□□ 2.02
LHX3-201ENST00000371746 ALG1Q9BT22 464 aa27.69■■■□□ 2.02
LHX3-201ENST00000371746 DACT1Q9NYF0 836 aa27.69■■■□□ 2.02
LHX3-201ENST00000371746 LDHBP07195 334 aaKnown RBP27.68■■■□□ 2.02
LHX3-201ENST00000371746 SPTY2D1Q68D10 685 aaPredicted RBP27.68■■■□□ 2.02
LHX3-201ENST00000371746 BICD2Q8TD16 824 aa27.68■■■□□ 2.02
LHX3-201ENST00000371746 GGA1Q9UJY5 639 aa27.68■■■□□ 2.02
LHX3-201ENST00000371746 LETM1O95202 739 aaPredicted RBP27.68■■■□□ 2.02
LHX3-201ENST00000371746 HOXA10P31260 410 aaPredicted RBP27.68■■■□□ 2.02
LHX3-201ENST00000371746 DIXDC1Q155Q3 683 aa27.68■■■□□ 2.02
LHX3-201ENST00000371746 BBOX1O75936 387 aa27.67■■■□□ 2.02
LHX3-201ENST00000371746 CAMK4Q16566 473 aa27.67■■■□□ 2.02
LHX3-201ENST00000371746 SYNE3Q6ZMZ3 975 aa27.67■■■□□ 2.02
LHX3-201ENST00000371746 AKT1S1Q96B36 256 aa27.67■■■□□ 2.02
LHX3-201ENST00000371746 TNKSO95271 1327 aa27.67■■■□□ 2.02
LHX3-201ENST00000371746 KIF28PB7ZC32 967 aa27.67■■■□□ 2.02
LHX3-201ENST00000371746 PLSCR1O15162 318 aa27.67■■■□□ 2.02
LHX3-201ENST00000371746 ZNF396Q96N95 335 aaPredicted RBP27.67■■■□□ 2.02
LHX3-201ENST00000371746 IARSP41252 1262 aaKnown RBP27.66■■■□□ 2.02
LHX3-201ENST00000371746 SLC4A8Q2Y0W8 1093 aa27.66■■■□□ 2.02
LHX3-201ENST00000371746 C15orf52Q6ZUT6 534 aaKnown RBP27.66■■■□□ 2.02
LHX3-201ENST00000371746 POLLQ9UGP5 575 aa27.66■■■□□ 2.02
LHX3-201ENST00000371746 RCOR1Q9UKL0 485 aa27.66■■■□□ 2.02
LHX3-201ENST00000371746 GOLGB1Q14789 3259 aaKnown RBP27.66■■■□□ 2.02
LHX3-201ENST00000371746 CYP2D6P10635 497 aa27.66■■■□□ 2.02
LHX3-201ENST00000371746 CD209Q9NNX6 404 aa27.66■■■□□ 2.02
LHX3-201ENST00000371746 KLRG2A4D1S0 409 aaPredicted RBP27.65■■■□□ 2.02
LHX3-201ENST00000371746 NR1I2O75469 434 aa27.65■■■□□ 2.02
LHX3-201ENST00000371746 ATP2B4P23634 1241 aa27.65■■■□□ 2.02
LHX3-201ENST00000371746 ZBTB22O15209 634 aa27.65■■■□□ 2.02
LHX3-201ENST00000371746 CCDC173Q0VFZ6 552 aa27.65■■■□□ 2.02
LHX3-201ENST00000371746 CMTR1Q8N1G2 835 aaKnown RBP27.65■■■□□ 2.02
LHX3-201ENST00000371746 NUP133Q8WUM0 1156 aa27.65■■■□□ 2.02
LHX3-201ENST00000371746 SLC26A6Q9BXS9 759 aa27.65■■■□□ 2.02
LHX3-201ENST00000371746 KIF23Q02241 960 aaPredicted RBP27.64■■■□□ 2.02
LHX3-201ENST00000371746 SEC23AQ15436 765 aa27.64■■■□□ 2.02
LHX3-201ENST00000371746 CCDC82Q8N4S0 544 aa27.64■■■□□ 2.02
LHX3-201ENST00000371746 CRAMP1Q96RY5 1269 aa27.64■■■□□ 2.02
LHX3-201ENST00000371746 NUP62CLQ9H1M0 184 aa27.64■■■□□ 2.02
LHX3-201ENST00000371746 ATP8A2Q9NTI2 1148 aa27.64■■■□□ 2.02
LHX3-201ENST00000371746 RTN1Q16799 776 aa27.63■■■□□ 2.01
LHX3-201ENST00000371746 ZNF654Q8IZM8 581 aa27.63■■■□□ 2.01
LHX3-201ENST00000371746 ENAHQ8N8S7 591 aaPredicted RBP27.63■■■□□ 2.01
LHX3-201ENST00000371746 TBC1D16Q8TBP0 767 aa27.63■■■□□ 2.01
LHX3-201ENST00000371746 DUOX1Q9NRD9 1551 aa27.63■■■□□ 2.01
LHX3-201ENST00000371746 ATL3Q6DD88 541 aa27.63■■■□□ 2.01
LHX3-201ENST00000371746 PPP1R9BQ96SB3 815 aa27.63■■■□□ 2.01
LHX3-201ENST00000371746 MTA3Q9BTC8 594 aa27.63■■■□□ 2.01
LHX3-201ENST00000371746 KRT40Q6A162 431 aa27.62■■■□□ 2.01
LHX3-201ENST00000371746 NLGN1Q8N2Q7 840 aa27.62■■■□□ 2.01
LHX3-201ENST00000371746 TMTC2Q8N394 836 aa27.62■■■□□ 2.01
LHX3-201ENST00000371746 ZSCAN10Q96SZ4 725 aaPredicted RBP27.62■■■□□ 2.01
LHX3-201ENST00000371746 FUCA2Q9BTY2 467 aa27.62■■■□□ 2.01
LHX3-201ENST00000371746 C6orf229H3BNL8 230 aa27.61■■■□□ 2.01
LHX3-201ENST00000371746 FGRP09769 529 aa27.61■■■□□ 2.01
LHX3-201ENST00000371746 SH3RF3Q8TEJ3 882 aaPredicted RBP27.61■■■□□ 2.01
LHX3-201ENST00000371746 MCM9Q9NXL9 1143 aa27.61■■■□□ 2.01
LHX3-201ENST00000371746 PODXL2Q9NZ53 605 aa27.61■■■□□ 2.01
LHX3-201ENST00000371746 NID2Q14112 1375 aa27.61■■■□□ 2.01
LHX3-201ENST00000371746 IFNAR1P17181 557 aa27.61■■■□□ 2.01
LHX3-201ENST00000371746 GUCY1A2P33402 732 aa27.61■■■□□ 2.01
LHX3-201ENST00000371746 SSRP1Q08945 709 aaKnown RBP27.61■■■□□ 2.01
LHX3-201ENST00000371746 MYSM1Q5VVJ2 828 aa27.61■■■□□ 2.01
LHX3-201ENST00000371746 CLIC4Q9Y696 253 aa27.61■■■□□ 2.01
LHX3-201ENST00000371746 MAST2Q6P0Q8 1798 aa27.61■■■□□ 2.01
LHX3-201ENST00000371746 PPEF1O14829 653 aaPredicted RBP27.6■■■□□ 2.01
LHX3-201ENST00000371746 USP17L8P0C7I0 530 aa27.6■■■□□ 2.01
LHX3-201ENST00000371746 ME1P48163 572 aa27.6■■■□□ 2.01
LHX3-201ENST00000371746 BRAPQ7Z569 592 aa27.6■■■□□ 2.01
LHX3-201ENST00000371746 FANCBQ8NB91 859 aa27.6■■■□□ 2.01
LHX3-201ENST00000371746 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.6■■■□□ 2.01
LHX3-201ENST00000371746 MYH15Q9Y2K3 1946 aa27.6■■■□□ 2.01
LHX3-201ENST00000371746 FMNL1O95466 1100 aaPredicted RBP27.6■■■□□ 2.01
LHX3-201ENST00000371746 MSL1Q68DK7 614 aa27.6■■■□□ 2.01
LHX3-201ENST00000371746 TMED8Q6PL24 325 aaPredicted RBP27.6■■■□□ 2.01
LHX3-201ENST00000371746 OLFM4Q6UX06 510 aa27.6■■■□□ 2.01
LHX3-201ENST00000371746 CKAP2LQ8IYA6 745 aa27.6■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms