RNA–Protein interactions for RNA: ENST00000369406.7

HMGCS2-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS2, Length 2,428 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-201ENST00000369406 TMX4Q9H1E5 349 aaPredicted RBP16.65■□□□□ 0.26
HMGCS2-201ENST00000369406 DAGLAQ9Y4D2 1042 aa16.65■□□□□ 0.26
HMGCS2-201ENST00000369406 GPR75-ASB3A0A0A6YYF3 556 aa16.65■□□□□ 0.26
HMGCS2-201ENST00000369406 SH2B2O14492 632 aaPredicted RBP16.65■□□□□ 0.26
HMGCS2-201ENST00000369406 PRDM1O75626 825 aa16.65■□□□□ 0.26
HMGCS2-201ENST00000369406 MCM4P33991 863 aa16.65■□□□□ 0.26
HMGCS2-201ENST00000369406 SCNN1DP51172 638 aa16.65■□□□□ 0.26
HMGCS2-201ENST00000369406 EVCP57679 992 aa16.65■□□□□ 0.26
HMGCS2-201ENST00000369406 PPP4CP60510 307 aa16.65■□□□□ 0.26
HMGCS2-201ENST00000369406 IGDCC4Q8TDY8 1250 aa16.65■□□□□ 0.26
HMGCS2-201ENST00000369406 TBC1D22AQ8WUA7 517 aa16.65■□□□□ 0.26
HMGCS2-201ENST00000369406 SMC3Q9UQE7 1217 aa16.65■□□□□ 0.26
HMGCS2-201ENST00000369406 MFSD6Q6ZSS7 791 aa16.64■□□□□ 0.25
HMGCS2-201ENST00000369406 SYT1P21579 422 aa16.64■□□□□ 0.25
HMGCS2-201ENST00000369406 PTGER2P43116 358 aa16.64■□□□□ 0.25
HMGCS2-201ENST00000369406 GSTO1P78417 241 aa16.64■□□□□ 0.25
HMGCS2-201ENST00000369406 NUCB2P80303 420 aa16.64■□□□□ 0.25
HMGCS2-201ENST00000369406 KIAA2012Q0VF49 1180 aa16.64■□□□□ 0.25
HMGCS2-201ENST00000369406 TGFBRAP1Q8WUH2 860 aa16.64■□□□□ 0.25
HMGCS2-201ENST00000369406 LY9Q9HBG7 655 aa16.64■□□□□ 0.25
HMGCS2-201ENST00000369406 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.64■□□□□ 0.25
HMGCS2-201ENST00000369406 WDR19Q8NEZ3 1342 aa16.64■□□□□ 0.25
HMGCS2-201ENST00000369406 DACT2Q5SW24 774 aa16.63■□□□□ 0.25
HMGCS2-201ENST00000369406 GIMAP6Q6P9H5 292 aa16.63■□□□□ 0.25
HMGCS2-201ENST00000369406 MAPKAPK5Q8IW41 473 aa16.63■□□□□ 0.25
HMGCS2-201ENST00000369406 NAP1L2Q9ULW6 460 aaPredicted RBP16.63■□□□□ 0.25
HMGCS2-201ENST00000369406 KLF18A0A0U1RQI7 1052 aa16.62■□□□□ 0.25
HMGCS2-201ENST00000369406 RXRAP19793 462 aa16.62■□□□□ 0.25
HMGCS2-201ENST00000369406 TRDNQ13061 729 aa16.62■□□□□ 0.25
HMGCS2-201ENST00000369406 ZNF277Q9NRM2 450 aaPredicted RBP16.62■□□□□ 0.25
HMGCS2-201ENST00000369406 ATP8A2Q9NTI2 1148 aa16.62■□□□□ 0.25
HMGCS2-201ENST00000369406 TTF2Q9UNY4 1162 aaKnown RBP16.62■□□□□ 0.25
HMGCS2-201ENST00000369406 BAG4O95429 457 aaKnown RBP16.62■□□□□ 0.25
HMGCS2-201ENST00000369406 FAM163AQ96GL9 167 aaPredicted RBP16.62■□□□□ 0.25
HMGCS2-201ENST00000369406 TOMM22Q9NS69 142 aa16.62■□□□□ 0.25
HMGCS2-201ENST00000369406 MCM9Q9NXL9 1143 aa16.62■□□□□ 0.25
HMGCS2-201ENST00000369406 PPP1R1BQ9UD71 204 aaPredicted RBP16.62■□□□□ 0.25
HMGCS2-201ENST00000369406 SAP30BPQ9UHR5 308 aaKnown RBP16.62■□□□□ 0.25
HMGCS2-201ENST00000369406 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.62■□□□□ 0.25
HMGCS2-201ENST00000369406 FGRP09769 529 aa16.61■□□□□ 0.25
HMGCS2-201ENST00000369406 TMED8Q6PL24 325 aaPredicted RBP16.61■□□□□ 0.25
HMGCS2-201ENST00000369406 PODNQ7Z5L7 613 aa16.61■□□□□ 0.25
HMGCS2-201ENST00000369406 NSUN7Q8NE18 718 aaKnown RBP16.61■□□□□ 0.25
HMGCS2-201ENST00000369406 DYNLL2Q96FJ2 89 aa16.61■□□□□ 0.25
HMGCS2-201ENST00000369406 MYL10Q9BUA6 226 aa16.61■□□□□ 0.25
HMGCS2-201ENST00000369406 ANGEL1Q9UNK9 670 aaKnown RBP16.61■□□□□ 0.25
HMGCS2-201ENST00000369406 SIPA1L1O43166 1804 aa16.61■□□□□ 0.25
HMGCS2-201ENST00000369406 G3V3G9 751 aa16.61■□□□□ 0.25
HMGCS2-201ENST00000369406 PPIP5K2O43314 1243 aa16.61■□□□□ 0.25
HMGCS2-201ENST00000369406 CCDC93Q567U6 631 aa16.61■□□□□ 0.25
HMGCS2-201ENST00000369406 DCAF8Q5TAQ9 597 aa16.61■□□□□ 0.25
HMGCS2-201ENST00000369406 DDX11Q96FC9 970 aa16.61■□□□□ 0.25
HMGCS2-201ENST00000369406 ZNF274Q96GC6 653 aaPredicted RBP16.61■□□□□ 0.25
HMGCS2-201ENST00000369406 MYH8P13535 1937 aa16.6■□□□□ 0.25
HMGCS2-201ENST00000369406 GOLGA8BA8MQT2 603 aa16.6■□□□□ 0.25
HMGCS2-201ENST00000369406 LDHCP07864 332 aa16.6■□□□□ 0.25
HMGCS2-201ENST00000369406 POLD1P28340 1107 aa16.6■□□□□ 0.25
HMGCS2-201ENST00000369406 USP5P45974 858 aa16.6■□□□□ 0.25
HMGCS2-201ENST00000369406 PLCD1P51178 756 aa16.6■□□□□ 0.25
HMGCS2-201ENST00000369406 CLEC17AQ6ZS10 378 aa16.6■□□□□ 0.25
HMGCS2-201ENST00000369406 KIAA0825Q8IV33 1275 aa16.6■□□□□ 0.25
HMGCS2-201ENST00000369406 MTMR6Q9Y217 621 aa16.6■□□□□ 0.25
HMGCS2-201ENST00000369406 MYH15Q9Y2K3 1946 aa16.6■□□□□ 0.25
HMGCS2-201ENST00000369406 FOXD4L6Q3SYB3 417 aaPredicted RBP16.6■□□□□ 0.25
HMGCS2-201ENST00000369406 SBK1Q52WX2 424 aa16.6■□□□□ 0.25
HMGCS2-201ENST00000369406 FOXD4L3Q6VB84 417 aaPredicted RBP16.6■□□□□ 0.25
HMGCS2-201ENST00000369406 TEX11Q8IYF3 940 aa16.6■□□□□ 0.25
HMGCS2-201ENST00000369406 KLHL34Q8N239 644 aa16.6■□□□□ 0.25
HMGCS2-201ENST00000369406 SLC44A5Q8NCS7 719 aa16.6■□□□□ 0.25
HMGCS2-201ENST00000369406 SMARCC2Q8TAQ2 1214 aa16.6■□□□□ 0.25
HMGCS2-201ENST00000369406 FLT1P17948 1338 aa16.59■□□□□ 0.25
HMGCS2-201ENST00000369406 STX6O43752 255 aa16.59■□□□□ 0.25
HMGCS2-201ENST00000369406 NMT2O60551 498 aa16.59■□□□□ 0.25
HMGCS2-201ENST00000369406 BAG3O95817 575 aa16.59■□□□□ 0.25
HMGCS2-201ENST00000369406 TMEM67Q5HYA8 995 aa16.59■□□□□ 0.25
HMGCS2-201ENST00000369406 C12orf60Q5U649 245 aa16.59■□□□□ 0.25
HMGCS2-201ENST00000369406 CC2D2BQ6DHV5 1058 aa16.59■□□□□ 0.25
HMGCS2-201ENST00000369406 KRT23Q9C075 422 aa16.59■□□□□ 0.25
HMGCS2-201ENST00000369406 CNNM2Q9H8M5 875 aa16.59■□□□□ 0.25
HMGCS2-201ENST00000369406 DDX4Q9NQI0 724 aaKnown RBP16.59■□□□□ 0.25
HMGCS2-201ENST00000369406 IGSF3O75054 1194 aa16.59■□□□□ 0.25
HMGCS2-201ENST00000369406 STRIP1Q5VSL9 837 aa16.59■□□□□ 0.25
HMGCS2-201ENST00000369406 ARPP21Q9UBL0 812 aaPredicted RBP16.59■□□□□ 0.25
HMGCS2-201ENST00000369406 PTPDC1A2A3K4 754 aa16.58■□□□□ 0.25
HMGCS2-201ENST00000369406 IFIT3O14879 490 aaKnown RBP16.58■□□□□ 0.25
HMGCS2-201ENST00000369406 FDPSP14324 419 aaKnown RBP16.58■□□□□ 0.25
HMGCS2-201ENST00000369406 TGFB2P61812 414 aa16.58■□□□□ 0.25
HMGCS2-201ENST00000369406 FAM47AQ5JRC9 791 aa16.58■□□□□ 0.25
HMGCS2-201ENST00000369406 APOBEC3HQ6NTF7 200 aaKnown RBP16.58■□□□□ 0.25
HMGCS2-201ENST00000369406 APOA5Q6Q788 366 aa16.58■□□□□ 0.25
HMGCS2-201ENST00000369406 CDC37L1Q7L3B6 337 aa16.58■□□□□ 0.25
HMGCS2-201ENST00000369406 CCDC144CPQ8IYA2 1237 aa16.58■□□□□ 0.25
HMGCS2-201ENST00000369406 PSMD1Q99460 953 aa16.58■□□□□ 0.25
HMGCS2-201ENST00000369406 PIM2Q9P1W9 311 aa16.58■□□□□ 0.25
HMGCS2-201ENST00000369406 MYH6P13533 1939 aa16.58■□□□□ 0.24
HMGCS2-201ENST00000369406 CDC27P30260 824 aa16.58■□□□□ 0.24
HMGCS2-201ENST00000369406 SEC23AQ15436 765 aa16.58■□□□□ 0.24
HMGCS2-201ENST00000369406 NLGN2Q8NFZ4 835 aa16.58■□□□□ 0.24
HMGCS2-201ENST00000369406 RNF41Q9H4P4 317 aaPredicted RBP16.58■□□□□ 0.24
HMGCS2-201ENST00000369406 FAM217BQ9NTX9 383 aaPredicted RBP16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms