RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 PLCH1Q4KWH8 1693 aa15.62■□□□□ 0.09
PRKN-205ENST00000366897 H7C1W4 665 aa15.62■□□□□ 0.09
PRKN-205ENST00000366897 ZNF213O14771 459 aa15.62■□□□□ 0.09
PRKN-205ENST00000366897 GPAA1O43292 621 aa15.62■□□□□ 0.09
PRKN-205ENST00000366897 TFRCP02786 760 aaKnown RBP15.62■□□□□ 0.09
PRKN-205ENST00000366897 APPP05067 770 aa15.62■□□□□ 0.09
PRKN-205ENST00000366897 FMR1Q06787 632 aaKnown RBP eCLIP15.62■□□□□ 0.09
PRKN-205ENST00000366897 CYB5R4Q7L1T6 521 aa15.62■□□□□ 0.09
PRKN-205ENST00000366897 CEP126Q9P2H0 1117 aa15.62■□□□□ 0.09
PRKN-205ENST00000366897 OLFM4Q6UX06 510 aa15.61■□□□□ 0.09
PRKN-205ENST00000366897 TBC1D10CQ8IV04 446 aa15.61■□□□□ 0.09
PRKN-205ENST00000366897 XAGE2Q96GT9 111 aa15.61■□□□□ 0.09
PRKN-205ENST00000366897 BAG1Q99933 345 aaPredicted RBP15.61■□□□□ 0.09
PRKN-205ENST00000366897 CWC25Q9NXE8 425 aaPredicted RBP15.61■□□□□ 0.09
PRKN-205ENST00000366897 CASQ1P31415 396 aa15.61■□□□□ 0.09
PRKN-205ENST00000366897 KCNJ6P48051 423 aa15.61■□□□□ 0.09
PRKN-205ENST00000366897 PPP2R3AQ06190 1150 aa15.61■□□□□ 0.09
PRKN-205ENST00000366897 PTPAQ15257 358 aa15.61■□□□□ 0.09
PRKN-205ENST00000366897 VPS72Q15906 364 aa15.61■□□□□ 0.09
PRKN-205ENST00000366897 CC2D1AQ6P1N0 951 aaPredicted RBP15.61■□□□□ 0.09
PRKN-205ENST00000366897 DHX58Q96C10 678 aa15.61■□□□□ 0.09
PRKN-205ENST00000366897 NBPF3Q9H094 633 aa15.61■□□□□ 0.09
PRKN-205ENST00000366897 EFCAB8A8MWE9 144 aa15.61■□□□□ 0.09
PRKN-205ENST00000366897 PRR29P0C7W0 189 aa15.61■□□□□ 0.09
PRKN-205ENST00000366897 METAP2P50579 478 aaKnown RBP eCLIP15.61■□□□□ 0.09
PRKN-205ENST00000366897 CABP4P57796 275 aa15.61■□□□□ 0.09
PRKN-205ENST00000366897 KCNH3Q9ULD8 1083 aa15.61■□□□□ 0.09
PRKN-205ENST00000366897 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.6■□□□□ 0.09
PRKN-205ENST00000366897 OVOS2A0A0G2JMS6 1433 aa15.6■□□□□ 0.09
PRKN-205ENST00000366897 B4E1Z4 1266 aa15.6■□□□□ 0.09
PRKN-205ENST00000366897 CBFA2T2O43439 604 aa15.6■□□□□ 0.09
PRKN-205ENST00000366897 IFNL2Q8IZJ0 200 aa15.6■□□□□ 0.09
PRKN-205ENST00000366897 CPLX3Q8WVH0 158 aa15.6■□□□□ 0.09
PRKN-205ENST00000366897 PARD6BQ9BYG5 372 aa15.6■□□□□ 0.09
PRKN-205ENST00000366897 HPSEQ9Y251 543 aa15.6■□□□□ 0.09
PRKN-205ENST00000366897 AFDNP55196 1824 aaKnown RBP15.6■□□□□ 0.09
PRKN-205ENST00000366897 NWD2Q9ULI1 1742 aa15.6■□□□□ 0.09
PRKN-205ENST00000366897 SMC1AQ14683 1233 aaKnown RBP15.6■□□□□ 0.09
PRKN-205ENST00000366897 LZTFL1Q9NQ48 299 aa15.6■□□□□ 0.09
PRKN-205ENST00000366897 NFE2L3Q9Y4A8 694 aa15.6■□□□□ 0.09
PRKN-205ENST00000366897 COL14A1Q05707 1796 aaKnown RBP15.59■□□□□ 0.09
PRKN-205ENST00000366897 CCDC158Q5M9N0 1113 aa15.59■□□□□ 0.09
PRKN-205ENST00000366897 MRPL44Q9H9J2 332 aaKnown RBP15.59■□□□□ 0.09
PRKN-205ENST00000366897 PUF60Q9UHX1 559 aaKnown RBP15.59■□□□□ 0.09
PRKN-205ENST00000366897 USP54Q70EL1 1684 aa15.59■□□□□ 0.09
PRKN-205ENST00000366897 ARHGAP6O43182 974 aa15.59■□□□□ 0.09
PRKN-205ENST00000366897 ZSCAN12O43309 604 aa15.59■□□□□ 0.09
PRKN-205ENST00000366897 CCDC102BQ68D86 513 aa15.59■□□□□ 0.09
PRKN-205ENST00000366897 KRBA2Q6ZNG9 492 aa15.59■□□□□ 0.09
PRKN-205ENST00000366897 CMTR1Q8N1G2 835 aaKnown RBP15.59■□□□□ 0.09
PRKN-205ENST00000366897 SYNE4Q8N205 404 aa15.59■□□□□ 0.09
PRKN-205ENST00000366897 TC2NQ8N9U0 490 aa15.59■□□□□ 0.09
PRKN-205ENST00000366897 CCDC12Q8WUD4 166 aaPredicted RBP15.59■□□□□ 0.09
PRKN-205ENST00000366897 MAP3K14Q99558 947 aa15.59■□□□□ 0.09
PRKN-205ENST00000366897 SAMSN1Q9NSI8 373 aaKnown RBP15.59■□□□□ 0.09
PRKN-205ENST00000366897 MEGF6O75095 1541 aa15.59■□□□□ 0.09
PRKN-205ENST00000366897 CPDO75976 1380 aa15.59■□□□□ 0.09
PRKN-205ENST00000366897 CCP110O43303 1012 aa15.58■□□□□ 0.09
PRKN-205ENST00000366897 NFXL1Q6ZNB6 911 aa15.58■□□□□ 0.09
PRKN-205ENST00000366897 KCNJ14Q9UNX9 436 aa15.58■□□□□ 0.09
PRKN-205ENST00000366897 RANBP6O60518 1105 aaKnown RBP15.58■□□□□ 0.08
PRKN-205ENST00000366897 RESP18Q5W5W9 173 aa15.58■□□□□ 0.08
PRKN-205ENST00000366897 SEC31BQ9NQW1 1179 aa15.58■□□□□ 0.08
PRKN-205ENST00000366897 STRN4Q9NRL3 753 aa15.58■□□□□ 0.08
PRKN-205ENST00000366897 SIPA1L3O60292 1781 aaPredicted RBP15.58■□□□□ 0.08
PRKN-205ENST00000366897 SOWAHDA6NJG2 315 aa15.58■□□□□ 0.08
PRKN-205ENST00000366897 COBLO75128 1261 aa15.58■□□□□ 0.08
PRKN-205ENST00000366897 GUCY1A2P33402 732 aa15.58■□□□□ 0.08
PRKN-205ENST00000366897 RAD51AP2Q09MP3 1159 aa15.58■□□□□ 0.08
PRKN-205ENST00000366897 SLC26A6Q9BXS9 759 aa15.58■□□□□ 0.08
PRKN-205ENST00000366897 MAN1B1Q9UKM7 699 aa15.58■□□□□ 0.08
PRKN-205ENST00000366897 ANGEL1Q9UNK9 670 aaKnown RBP15.58■□□□□ 0.08
PRKN-205ENST00000366897 GLI3P10071 1580 aa15.57■□□□□ 0.08
PRKN-205ENST00000366897 BTBD18B2RXH4 712 aa15.57■□□□□ 0.08
PRKN-205ENST00000366897 POLR2DO15514 142 aaKnown RBP15.57■□□□□ 0.08
PRKN-205ENST00000366897 CASP1P29466 404 aa15.57■□□□□ 0.08
PRKN-205ENST00000366897 MAP3K9P80192 1104 aa15.57■□□□□ 0.08
PRKN-205ENST00000366897 TRDNQ13061 729 aa15.57■□□□□ 0.08
PRKN-205ENST00000366897 KLHL10Q6JEL2 608 aa15.57■□□□□ 0.08
PRKN-205ENST00000366897 APOA5Q6Q788 366 aa15.57■□□□□ 0.08
PRKN-205ENST00000366897 USP49Q70CQ1 688 aa15.57■□□□□ 0.08
PRKN-205ENST00000366897 APPBP2Q92624 585 aa15.57■□□□□ 0.08
PRKN-205ENST00000366897 MED15Q96RN5 788 aa15.57■□□□□ 0.08
PRKN-205ENST00000366897 MRFAP1Q9Y605 127 aa15.57■□□□□ 0.08
PRKN-205ENST00000366897 H3BQF6 201 aa15.57■□□□□ 0.08
PRKN-205ENST00000366897 IDH1O75874 414 aaKnown RBP15.57■□□□□ 0.08
PRKN-205ENST00000366897 STX17P56962 302 aa15.57■□□□□ 0.08
PRKN-205ENST00000366897 CCDC57Q2TAC2 916 aa15.57■□□□□ 0.08
PRKN-205ENST00000366897 FAM89AQ96GI7 184 aa15.57■□□□□ 0.08
PRKN-205ENST00000366897 SRRTQ9BXP5 876 aaKnown RBP15.57■□□□□ 0.08
PRKN-205ENST00000366897 SUGCTQ9HAC7 445 aa15.57■□□□□ 0.08
PRKN-205ENST00000366897 SERTAD1Q9UHV2 236 aa15.57■□□□□ 0.08
PRKN-205ENST00000366897 RGPD5Q99666 1765 aa15.56■□□□□ 0.08
PRKN-205ENST00000366897 TAF7LQ5H9L4 462 aa15.56■□□□□ 0.08
PRKN-205ENST00000366897 WWC2Q6AWC2 1192 aa15.56■□□□□ 0.08
PRKN-205ENST00000366897 JMYQ8N9B5 988 aa15.56■□□□□ 0.08
PRKN-205ENST00000366897 KIFC2Q96AC6 838 aa15.56■□□□□ 0.08
PRKN-205ENST00000366897 ARFGAP3Q9NP61 516 aa15.56■□□□□ 0.08
PRKN-205ENST00000366897 GPR108Q9NPR9 543 aa15.56■□□□□ 0.08
PRKN-205ENST00000366897 SLIT3O75094 1523 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms