RNA–Protein interactions for RNA: ENST00000366744.5

MRPL55-216, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MRPL55, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-216ENST00000366744 CYP2E1P05181 493 aaPredicted RBP11.33□□□□□ -0.6
MRPL55-216ENST00000366744 MAP3K9P80192 1104 aa11.33□□□□□ -0.6
MRPL55-216ENST00000366744 NFIAQ12857 509 aa11.33□□□□□ -0.6
MRPL55-216ENST00000366744 AAMPQ13685 434 aa11.33□□□□□ -0.6
MRPL55-216ENST00000366744 VGLL4Q14135 290 aa11.33□□□□□ -0.6
MRPL55-216ENST00000366744 CDAN1Q8IWY9 1227 aa11.33□□□□□ -0.6
MRPL55-216ENST00000366744 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.33□□□□□ -0.63e-6■■■■□ 21.3
MRPL55-216ENST00000366744 OPTNQ96CV9 577 aa11.33□□□□□ -0.6
MRPL55-216ENST00000366744 OTUD5Q96G74 571 aa11.33□□□□□ -0.6
MRPL55-216ENST00000366744 TRIM34Q9BYJ4 488 aa11.33□□□□□ -0.6
MRPL55-216ENST00000366744 TSKSQ9UJT2 592 aa11.33□□□□□ -0.6
MRPL55-216ENST00000366744 DDX60LQ5H9U9 1706 aaKnown RBP11.32□□□□□ -0.6
MRPL55-216ENST00000366744 TRPA1O75762 1119 aa11.32□□□□□ -0.6
MRPL55-216ENST00000366744 INHBEP58166 350 aa11.32□□□□□ -0.6
MRPL55-216ENST00000366744 COL13A1Q5TAT6 717 aaPredicted RBP11.32□□□□□ -0.6
MRPL55-216ENST00000366744 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.32□□□□□ -0.6
MRPL55-216ENST00000366744 CRBNQ96SW2 442 aa11.32□□□□□ -0.6
MRPL55-216ENST00000366744 ZIC5Q96T25 663 aa11.32□□□□□ -0.6
MRPL55-216ENST00000366744 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.32□□□□□ -0.6
MRPL55-216ENST00000366744 AATFQ9NY61 560 aaKnown RBP eCLIP11.32□□□□□ -0.6
MRPL55-216ENST00000366744 FAM198AQ9UFP1 575 aa11.32□□□□□ -0.6
MRPL55-216ENST00000366744 BAZ2AQ9UIF9 1905 aaKnown RBP11.32□□□□□ -0.6
MRPL55-216ENST00000366744 SIPA1L1O43166 1804 aa11.32□□□□□ -0.6
MRPL55-216ENST00000366744 ATRNL1Q5VV63 1379 aa11.31□□□□□ -0.6
MRPL55-216ENST00000366744 PHIPQ8WWQ0 1821 aa11.31□□□□□ -0.6
MRPL55-216ENST00000366744 GOLIM4O00461 696 aa11.31□□□□□ -0.6
MRPL55-216ENST00000366744 CYP7A1P22680 504 aa11.31□□□□□ -0.6
MRPL55-216ENST00000366744 MIGA2Q7L4E1 593 aa11.31□□□□□ -0.6
MRPL55-216ENST00000366744 MAGEB6Q8N7X4 407 aa11.31□□□□□ -0.6
MRPL55-216ENST00000366744 PIH1D3Q9NQM4 214 aaKnown RBP11.31□□□□□ -0.6
MRPL55-216ENST00000366744 PICK1Q9NRD5 415 aa11.31□□□□□ -0.6
MRPL55-216ENST00000366744 RNF186Q9NXI6 227 aa11.31□□□□□ -0.6
MRPL55-216ENST00000366744 SPDYE5A6NIY4 337 aa11.3□□□□□ -0.6
MRPL55-216ENST00000366744 NPM3O75607 178 aaKnown RBP11.3□□□□□ -0.6
MRPL55-216ENST00000366744 HLA-DOAP06340 250 aa11.3□□□□□ -0.6
MRPL55-216ENST00000366744 USP5P45974 858 aa11.3□□□□□ -0.6
MRPL55-216ENST00000366744 GTF2A2P52657 109 aa11.3□□□□□ -0.6
MRPL55-216ENST00000366744 ERO1BQ86YB8 467 aa11.3□□□□□ -0.6
MRPL55-216ENST00000366744 SH3RF3Q8TEJ3 882 aaPredicted RBP11.3□□□□□ -0.6
MRPL55-216ENST00000366744 OSBPL5Q9H0X9 879 aaPredicted RBP11.3□□□□□ -0.6
MRPL55-216ENST00000366744 DHX36Q9H2U1 1008 aaKnown RBP11.3□□□□□ -0.6
MRPL55-216ENST00000366744 PAG1Q9NWQ8 432 aa11.3□□□□□ -0.6
MRPL55-216ENST00000366744 LOC285556D6RIA3 1793 aa11.29□□□□□ -0.6
MRPL55-216ENST00000366744 CETPP11597 493 aa11.29□□□□□ -0.6
MRPL55-216ENST00000366744 ATP5JP18859 108 aa11.29□□□□□ -0.6
MRPL55-216ENST00000366744 TM4SF4P48230 202 aa11.29□□□□□ -0.6
MRPL55-216ENST00000366744 RHBDL3P58872 404 aa11.29□□□□□ -0.6
MRPL55-216ENST00000366744 PPIL2Q13356 520 aa11.29□□□□□ -0.6
MRPL55-216ENST00000366744 SNAPC2Q13487 334 aa11.29□□□□□ -0.6
MRPL55-216ENST00000366744 SLC9C2Q5TAH2 1124 aa11.29□□□□□ -0.6
MRPL55-216ENST00000366744 ZSCAN25Q6NSZ9 544 aa11.29□□□□□ -0.6
MRPL55-216ENST00000366744 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.29□□□□□ -0.6
MRPL55-216ENST00000366744 CRACR2BQ8N4Y2 399 aaPredicted RBP11.29□□□□□ -0.6
MRPL55-216ENST00000366744 ZNF384Q8TF68 577 aa11.29□□□□□ -0.6
MRPL55-216ENST00000366744 ZKSCAN4Q969J2 545 aaPredicted RBP11.29□□□□□ -0.6
MRPL55-216ENST00000366744 DCTPP1Q9H773 170 aa11.29□□□□□ -0.6
MRPL55-216ENST00000366744 ECHDC1Q9NTX5 307 aa11.29□□□□□ -0.6
MRPL55-216ENST00000366744 SNCAIPQ9Y6H5 919 aa11.29□□□□□ -0.6
MRPL55-216ENST00000366744 NDUFB9Q9Y6M9 179 aa11.29□□□□□ -0.6
MRPL55-216ENST00000366744 FLT1P17948 1338 aa11.29□□□□□ -0.6
MRPL55-216ENST00000366744 CCL15-CCL14A0A0B4J2E2 113 aa11.28□□□□□ -0.6
MRPL55-216ENST00000366744 MAGEB6P1A0A0J9YX57 407 aa11.28□□□□□ -0.6
MRPL55-216ENST00000366744 ERC2O15083 957 aa11.28□□□□□ -0.6
MRPL55-216ENST00000366744 SMARCA5O60264 1052 aaPredicted RBP11.28□□□□□ -0.6
MRPL55-216ENST00000366744 PPATQ06203 517 aa11.28□□□□□ -0.6
MRPL55-216ENST00000366744 CCL15Q16663 113 aa11.28□□□□□ -0.6
MRPL55-216ENST00000366744 LRRFIP1Q32MZ4 808 aaKnown RBP11.28□□□□□ -0.6
MRPL55-216ENST00000366744 NOL9Q5SY16 702 aaKnown RBP11.28□□□□□ -0.6
MRPL55-216ENST00000366744 IFNL1Q8IU54 200 aa11.28□□□□□ -0.6
MRPL55-216ENST00000366744 MAPKAPK5Q8IW41 473 aa11.28□□□□□ -0.6
MRPL55-216ENST00000366744 AMOTL1Q8IY63 956 aa11.28□□□□□ -0.6
MRPL55-216ENST00000366744 SCYL3Q8IZE3 742 aa11.28□□□□□ -0.6
MRPL55-216ENST00000366744 MIGA1Q8NAN2 632 aa11.28□□□□□ -0.6
MRPL55-216ENST00000366744 TGFBRAP1Q8WUH2 860 aa11.28□□□□□ -0.6
MRPL55-216ENST00000366744 GCC1Q96CN9 775 aa11.28□□□□□ -0.6
MRPL55-216ENST00000366744 DDRGK1Q96HY6 314 aa11.28□□□□□ -0.6
MRPL55-216ENST00000366744 CRNKL1Q9BZJ0 848 aaKnown RBP11.28□□□□□ -0.6
MRPL55-216ENST00000366744 BOLA2Q9H3K6 86 aa11.28□□□□□ -0.6
MRPL55-216ENST00000366744 ANTXR1Q9H6X2 564 aa11.28□□□□□ -0.6
MRPL55-216ENST00000366744 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.28□□□□□ -0.6
MRPL55-216ENST00000366744 DDX4Q9NQI0 724 aaKnown RBP11.28□□□□□ -0.6
MRPL55-216ENST00000366744 HERC5Q9UII4 1024 aaKnown RBP11.28□□□□□ -0.6
MRPL55-216ENST00000366744 DDTLA6NHG4 134 aaPredicted RBP11.27□□□□□ -0.61
MRPL55-216ENST00000366744 PDE6AP16499 860 aa11.27□□□□□ -0.61
MRPL55-216ENST00000366744 INPP5BP32019 993 aa11.27□□□□□ -0.61
MRPL55-216ENST00000366744 PPP4CP60510 307 aa11.27□□□□□ -0.61
MRPL55-216ENST00000366744 ADGRA1Q86SQ6 560 aa11.27□□□□□ -0.61
MRPL55-216ENST00000366744 HAUS7Q99871 368 aa11.27□□□□□ -0.61
MRPL55-216ENST00000366744 PI4KBQ9UBF8 816 aa11.27□□□□□ -0.61
MRPL55-216ENST00000366744 PCDHB15Q9Y5E8 787 aa11.27□□□□□ -0.61
MRPL55-216ENST00000366744 MGAMO43451 1857 aa11.26□□□□□ -0.61
MRPL55-216ENST00000366744 CTNND1O60716 968 aaKnown RBP11.26□□□□□ -0.61
MRPL55-216ENST00000366744 TBC1D8O95759 1140 aa11.26□□□□□ -0.61
MRPL55-216ENST00000366744 TAF1CQ15572 869 aaPredicted RBP11.26□□□□□ -0.61
MRPL55-216ENST00000366744 ZFPM1Q8IX07 1006 aa11.26□□□□□ -0.61
MRPL55-216ENST00000366744 CNKSR2Q8WXI2 1034 aa11.26□□□□□ -0.61
MRPL55-216ENST00000366744 ZNF112Q9UJU3 913 aa11.26□□□□□ -0.61
MRPL55-216ENST00000366744 TTC41PQ6P2S7 1318 aa11.26□□□□□ -0.61
MRPL55-216ENST00000366744 ZNF532Q9HCE3 1301 aa11.26□□□□□ -0.61
MRPL55-216ENST00000366744 IGF2BP3O00425 579 aaKnown RBP eCLIP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms