RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 SV2BQ7L1I2 683 aa8.05□□□□□ -1.12
RNU4-28P-201ENST00000364739 SLC51AQ86UW1 340 aa8.05□□□□□ -1.12
RNU4-28P-201ENST00000364739 ZDHHC13Q8IUH4 622 aa8.05□□□□□ -1.12
RNU4-28P-201ENST00000364739 ANKRD24Q8TF21 1146 aa8.05□□□□□ -1.12
RNU4-28P-201ENST00000364739 EZH1Q92800 747 aaPredicted RBP8.05□□□□□ -1.12
RNU4-28P-201ENST00000364739 SAMM50Q9Y512 469 aa8.05□□□□□ -1.12
RNU4-28P-201ENST00000364739 SORBS3O60504 671 aa8.04□□□□□ -1.12
RNU4-28P-201ENST00000364739 RNGTTO60942 597 aaKnown RBP8.04□□□□□ -1.12
RNU4-28P-201ENST00000364739 ZC3H12AQ5D1E8 599 aaKnown RBP8.04□□□□□ -1.12
RNU4-28P-201ENST00000364739 TTBK2Q6IQ55 1244 aa8.04□□□□□ -1.12
RNU4-28P-201ENST00000364739 C12orf40Q86WS4 652 aa8.04□□□□□ -1.12
RNU4-28P-201ENST00000364739 DBNDD2Q9BQY9 259 aa8.04□□□□□ -1.12
RNU4-28P-201ENST00000364739 MRS2Q9HD23 443 aa8.04□□□□□ -1.12
RNU4-28P-201ENST00000364739 CACNA2D2Q9NY47 1150 aa8.04□□□□□ -1.12
RNU4-28P-201ENST00000364739 VTI1BQ9UEU0 232 aa8.04□□□□□ -1.12
RNU4-28P-201ENST00000364739 PCDHA4Q9UN74 947 aa8.04□□□□□ -1.12
RNU4-28P-201ENST00000364739 PCDHB5Q9Y5E4 795 aa8.04□□□□□ -1.12
RNU4-28P-201ENST00000364739 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.03□□□□□ -1.12
RNU4-28P-201ENST00000364739 MED26O95402 600 aa8.03□□□□□ -1.12
RNU4-28P-201ENST00000364739 F13BP05160 661 aa8.03□□□□□ -1.12
RNU4-28P-201ENST00000364739 SSTR4P31391 388 aa8.03□□□□□ -1.12
RNU4-28P-201ENST00000364739 CDK8P49336 464 aa8.03□□□□□ -1.12
RNU4-28P-201ENST00000364739 TAF1CQ15572 869 aaPredicted RBP8.03□□□□□ -1.12
RNU4-28P-201ENST00000364739 PPM1JQ5JR12 505 aa8.03□□□□□ -1.12
RNU4-28P-201ENST00000364739 MCTP1Q6DN14 999 aa8.03□□□□□ -1.12
RNU4-28P-201ENST00000364739 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.03□□□□□ -1.12
RNU4-28P-201ENST00000364739 TBC1D32Q96NH3 1257 aa8.03□□□□□ -1.12
RNU4-28P-201ENST00000364739 KRTAP9-9Q9BYP9 154 aa8.03□□□□□ -1.12
RNU4-28P-201ENST00000364739 KRTAP9-4Q9BYQ2 154 aa8.03□□□□□ -1.12
RNU4-28P-201ENST00000364739 PIDD1Q9HB75 910 aa8.03□□□□□ -1.12
RNU4-28P-201ENST00000364739 PRKAG2Q9UGJ0 569 aa8.03□□□□□ -1.12
RNU4-28P-201ENST00000364739 CYP8B1Q9UNU6 501 aa8.03□□□□□ -1.12
RNU4-28P-201ENST00000364739 SYNGAP1Q96PV0 1343 aa8.03□□□□□ -1.12
RNU4-28P-201ENST00000364739 PRR19A6NJB7 356 aa8.02□□□□□ -1.13
RNU4-28P-201ENST00000364739 GSC2O15499 205 aa8.02□□□□□ -1.13
RNU4-28P-201ENST00000364739 TRIM37O94972 964 aa8.02□□□□□ -1.13
RNU4-28P-201ENST00000364739 NEFMP07197 916 aa8.02□□□□□ -1.13
RNU4-28P-201ENST00000364739 INPP5AQ14642 412 aa8.02□□□□□ -1.13
RNU4-28P-201ENST00000364739 LRRC14Q15048 493 aa8.02□□□□□ -1.13
RNU4-28P-201ENST00000364739 YIPF2Q9BWQ6 316 aa8.02□□□□□ -1.13
RNU4-28P-201ENST00000364739 ATXN3LQ9H3M9 355 aa8.02□□□□□ -1.13
RNU4-28P-201ENST00000364739 C1GALT1Q9NS00 363 aa8.02□□□□□ -1.13
RNU4-28P-201ENST00000364739 TLR6Q9Y2C9 796 aa8.02□□□□□ -1.13
RNU4-28P-201ENST00000364739 USP31Q70CQ4 1352 aa8.01□□□□□ -1.13
RNU4-28P-201ENST00000364739 FAM170BA6NMN3 283 aa8.01□□□□□ -1.13
RNU4-28P-201ENST00000364739 SEPT6Q14141 434 aa8.01□□□□□ -1.13
RNU4-28P-201ENST00000364739 MAP7Q14244 749 aa8.01□□□□□ -1.13
RNU4-28P-201ENST00000364739 SMYD4Q8IYR2 804 aaPredicted RBP8.01□□□□□ -1.13
RNU4-28P-201ENST00000364739 GATA6Q92908 595 aa8.01□□□□□ -1.13
RNU4-28P-201ENST00000364739 HOXA10P31260 410 aaPredicted RBP8□□□□□ -1.13
RNU4-28P-201ENST00000364739 LIG3P49916 1009 aa8□□□□□ -1.13
RNU4-28P-201ENST00000364739 CDK5R2Q13319 367 aa8□□□□□ -1.13
RNU4-28P-201ENST00000364739 SEZ6L2Q6UXD5 910 aa8□□□□□ -1.13
RNU4-28P-201ENST00000364739 UBE3DQ7Z6J8 389 aa8□□□□□ -1.13
RNU4-28P-201ENST00000364739 ISL2Q96A47 359 aa8□□□□□ -1.13
RNU4-28P-201ENST00000364739 SSU72Q9NP77 194 aaKnown RBP8□□□□□ -1.13
RNU4-28P-201ENST00000364739 ZNF326Q5BKZ1 582 aaKnown RBP7.99□□□□□ -1.13
RNU4-28P-201ENST00000364739 LRFN4Q6PJG9 635 aa7.99□□□□□ -1.13
RNU4-28P-201ENST00000364739 ZAR1Q86SH2 424 aa7.99□□□□□ -1.13
RNU4-28P-201ENST00000364739 GAL3ST3Q96A11 431 aa7.99□□□□□ -1.13
RNU4-28P-201ENST00000364739 ATG3Q9NT62 314 aa7.99□□□□□ -1.13
RNU4-28P-201ENST00000364739 PCMTD2Q9NV79 361 aa7.99□□□□□ -1.13
RNU4-28P-201ENST00000364739 ZNF16P17020 682 aaPredicted RBP7.98□□□□□ -1.13
RNU4-28P-201ENST00000364739 TFE3P19532 575 aaPredicted RBP7.98□□□□□ -1.13
RNU4-28P-201ENST00000364739 ERVK-24P63145 666 aa7.98□□□□□ -1.13
RNU4-28P-201ENST00000364739 RNF214Q8ND24 703 aa7.98□□□□□ -1.13
RNU4-28P-201ENST00000364739 JARID2Q92833 1246 aaPredicted RBP7.98□□□□□ -1.13
RNU4-28P-201ENST00000364739 PICK1Q9NRD5 415 aa7.98□□□□□ -1.13
RNU4-28P-201ENST00000364739 COL17A1Q9UMD9 1497 aaPredicted RBP7.98□□□□□ -1.13
RNU4-28P-201ENST00000364739 AGMOQ6ZNB7 445 aa7.97□□□□□ -1.13
RNU4-28P-201ENST00000364739 ZNF765Q7L2R6 523 aa7.97□□□□□ -1.13
RNU4-28P-201ENST00000364739 ELMO3Q96BJ8 720 aa7.97□□□□□ -1.13
RNU4-28P-201ENST00000364739 PLPPR2Q96GM1 343 aa7.97□□□□□ -1.13
RNU4-28P-201ENST00000364739 CRELD1Q96HD1 420 aa7.97□□□□□ -1.13
RNU4-28P-201ENST00000364739 OSBPL1AQ9BXW6 950 aa7.97□□□□□ -1.13
RNU4-28P-201ENST00000364739 PRAMEF27A3QJZ7 478 aa7.96□□□□□ -1.14
RNU4-28P-201ENST00000364739 LMNB1P20700 586 aa7.96□□□□□ -1.14
RNU4-28P-201ENST00000364739 NTF4P34130 210 aa7.96□□□□□ -1.14
RNU4-28P-201ENST00000364739 ST13P50502 369 aaKnown RBP7.96□□□□□ -1.14
RNU4-28P-201ENST00000364739 HNRNPUQ00839 825 aaKnown RBP eCLIP7.96□□□□□ -1.14
RNU4-28P-201ENST00000364739 RING1Q06587 406 aa7.96□□□□□ -1.14
RNU4-28P-201ENST00000364739 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.96□□□□□ -1.14
RNU4-28P-201ENST00000364739 PCOLCE2Q9UKZ9 415 aa7.96□□□□□ -1.14
RNU4-28P-201ENST00000364739 MINDY4BA8MYZ0 360 aa7.95□□□□□ -1.14
RNU4-28P-201ENST00000364739 RBAK-RBAKDNI3L0D1 243 aa7.95□□□□□ -1.14
RNU4-28P-201ENST00000364739 PAX4O43316 350 aa7.95□□□□□ -1.14
RNU4-28P-201ENST00000364739 LEFTY1O75610 366 aa7.95□□□□□ -1.14
RNU4-28P-201ENST00000364739 PHC3Q8NDX5 983 aa7.95□□□□□ -1.14
RNU4-28P-201ENST00000364739 NOC4LQ9BVI4 516 aaKnown RBP7.95□□□□□ -1.14
RNU4-28P-201ENST00000364739 LRRC4CQ9HCJ2 640 aa7.95□□□□□ -1.14
RNU4-28P-201ENST00000364739 PIM2Q9P1W9 311 aa7.95□□□□□ -1.14
RNU4-28P-201ENST00000364739 LEMD3Q9Y2U8 911 aa7.95□□□□□ -1.14
RNU4-28P-201ENST00000364739 COBLO75128 1261 aa7.94□□□□□ -1.14
RNU4-28P-201ENST00000364739 FAM87AP0C7U9 286 aa7.94□□□□□ -1.14
RNU4-28P-201ENST00000364739 CD97P48960 835 aa7.94□□□□□ -1.14
RNU4-28P-201ENST00000364739 RPS26P62854 115 aaKnown RBP7.94□□□□□ -1.14
RNU4-28P-201ENST00000364739 MRPL58Q14197 206 aaKnown RBP7.94□□□□□ -1.14
RNU4-28P-201ENST00000364739 WIPI1Q5MNZ9 446 aaPredicted RBP7.94□□□□□ -1.14
RNU4-28P-201ENST00000364739 ZBTB37Q5TC79 503 aa7.94□□□□□ -1.14
RNU4-28P-201ENST00000364739 OGFOD3Q6PK18 319 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms