RNA–Protein interactions for RNA: ENST00000363693.1

RNU6-640P-201, Transcript of RNA, U6 small nuclear 640, pseudogene, humanhuman

BASIC

Gene RNU6-640P, Length 105 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-640P-201ENST00000363693 CTSBP07858 339 aa2.81□□□□□ -1.96
RNU6-640P-201ENST00000363693 IGFBP4P22692 258 aa2.81□□□□□ -1.96
RNU6-640P-201ENST00000363693 HK2P52789 917 aa2.81□□□□□ -1.96
RNU6-640P-201ENST00000363693 ERVFC1P60507 584 aa2.81□□□□□ -1.96
RNU6-640P-201ENST00000363693 POU4F3Q15319 338 aa2.81□□□□□ -1.96
RNU6-640P-201ENST00000363693 NKPD1Q17RQ9 610 aa2.81□□□□□ -1.96
RNU6-640P-201ENST00000363693 WASHC4Q2M389 1173 aa2.81□□□□□ -1.96
RNU6-640P-201ENST00000363693 CDCP2Q5VXM1 449 aa2.81□□□□□ -1.96
RNU6-640P-201ENST00000363693 BHLHA9Q7RTU4 235 aa2.81□□□□□ -1.96
RNU6-640P-201ENST00000363693 SMYD4Q8IYR2 804 aaPredicted RBP2.81□□□□□ -1.96
RNU6-640P-201ENST00000363693 ASAP3Q8TDY4 903 aa2.81□□□□□ -1.96
RNU6-640P-201ENST00000363693 PIK3R5Q8WYR1 880 aa2.81□□□□□ -1.96
RNU6-640P-201ENST00000363693 HEXIM2Q96MH2 286 aaKnown RBP2.81□□□□□ -1.96
RNU6-640P-201ENST00000363693 A6NJR5 290 aa2.8□□□□□ -1.96
RNU6-640P-201ENST00000363693 KRTAP29-1A8MX34 341 aaPredicted RBP2.8□□□□□ -1.96
RNU6-640P-201ENST00000363693 RNGTTO60942 597 aaKnown RBP2.8□□□□□ -1.96
RNU6-640P-201ENST00000363693 ZNF20P17024 532 aa2.8□□□□□ -1.96
RNU6-640P-201ENST00000363693 PDE6BP35913 854 aa2.8□□□□□ -1.96
RNU6-640P-201ENST00000363693 INHBEP58166 350 aa2.8□□□□□ -1.96
RNU6-640P-201ENST00000363693 PDE3AQ14432 1141 aa2.8□□□□□ -1.96
RNU6-640P-201ENST00000363693 CRIP3Q6Q6R5 217 aa2.8□□□□□ -1.96
RNU6-640P-201ENST00000363693 TMEM102Q8N9M5 508 aaPredicted RBP2.8□□□□□ -1.96
RNU6-640P-201ENST00000363693 SH3RF3Q8TEJ3 882 aaPredicted RBP2.8□□□□□ -1.96
RNU6-640P-201ENST00000363693 CORO1BQ9BR76 489 aa2.8□□□□□ -1.96
RNU6-640P-201ENST00000363693 NRSN2Q9GZP1 204 aa2.8□□□□□ -1.96
RNU6-640P-201ENST00000363693 FAM13BQ9NYF5 915 aa2.8□□□□□ -1.96
RNU6-640P-201ENST00000363693 AOC2O75106 756 aa2.79□□□□□ -1.96
RNU6-640P-201ENST00000363693 TRHRP34981 398 aaPredicted RBP2.79□□□□□ -1.96
RNU6-640P-201ENST00000363693 SEC13P55735 322 aa2.79□□□□□ -1.96
RNU6-640P-201ENST00000363693 KLF10Q13118 480 aa2.79□□□□□ -1.96
RNU6-640P-201ENST00000363693 ZFYVE27Q5T4F4 411 aa2.79□□□□□ -1.96
RNU6-640P-201ENST00000363693 FERMT3Q86UX7 667 aa2.79□□□□□ -1.96
RNU6-640P-201ENST00000363693 C1orf127Q8N9H9 656 aa2.79□□□□□ -1.96
RNU6-640P-201ENST00000363693 ATXN3LQ9H3M9 355 aa2.79□□□□□ -1.96
RNU6-640P-201ENST00000363693 USP40Q9NVE5 1235 aa2.79□□□□□ -1.96
RNU6-640P-201ENST00000363693 LRFN2Q9ULH4 789 aa2.79□□□□□ -1.96
RNU6-640P-201ENST00000363693 IGF2BP3O00425 579 aaKnown RBP eCLIP2.78□□□□□ -1.96
RNU6-640P-201ENST00000363693 HPXP02790 462 aa2.78□□□□□ -1.96
RNU6-640P-201ENST00000363693 KCNC1P48547 511 aa2.78□□□□□ -1.96
RNU6-640P-201ENST00000363693 LRCH2Q5VUJ6 765 aa2.78□□□□□ -1.96
RNU6-640P-201ENST00000363693 SPRED1Q7Z699 444 aa2.78□□□□□ -1.96
RNU6-640P-201ENST00000363693 LINC01356Q8N9X3 169 aa2.78□□□□□ -1.96
RNU6-640P-201ENST00000363693 C8orf49Q96NF6 230 aa2.78□□□□□ -1.96
RNU6-640P-201ENST00000363693 GOPCQ9HD26 462 aa2.78□□□□□ -1.96
RNU6-640P-201ENST00000363693 SSU72Q9NP77 194 aaKnown RBP2.78□□□□□ -1.96
RNU6-640P-201ENST00000363693 TMEM59LQ9UK28 342 aa2.78□□□□□ -1.96
RNU6-640P-201ENST00000363693 PPP1R9AQ9ULJ8 1098 aa2.78□□□□□ -1.96
RNU6-640P-201ENST00000363693 DNAJC25-GNG10A0A024R161 153 aa2.77□□□□□ -1.97
RNU6-640P-201ENST00000363693 USP17L3A6NCW0 530 aa2.77□□□□□ -1.97
RNU6-640P-201ENST00000363693 USP17L4A6NCW7 530 aa2.77□□□□□ -1.97
RNU6-640P-201ENST00000363693 FAM155AB1AL88 458 aaPredicted RBP2.77□□□□□ -1.97
RNU6-640P-201ENST00000363693 HCLS1P14317 486 aaPredicted RBP2.77□□□□□ -1.97
RNU6-640P-201ENST00000363693 CES1P23141 567 aa2.77□□□□□ -1.97
RNU6-640P-201ENST00000363693 ABL2P42684 1182 aa2.77□□□□□ -1.97
RNU6-640P-201ENST00000363693 CNKSR3Q6P9H4 555 aa2.77□□□□□ -1.97
RNU6-640P-201ENST00000363693 USP17L2Q6R6M4 530 aa2.77□□□□□ -1.97
RNU6-640P-201ENST00000363693 USP17L1Q7RTZ2 530 aa2.77□□□□□ -1.97
RNU6-640P-201ENST00000363693 NXPE3Q969Y0 559 aa2.77□□□□□ -1.97
RNU6-640P-201ENST00000363693 VWCEQ96DN2 955 aa2.77□□□□□ -1.97
RNU6-640P-201ENST00000363693 INTS4Q96HW7 963 aaKnown RBP2.77□□□□□ -1.97
RNU6-640P-201ENST00000363693 LOXL4Q96JB6 756 aa2.77□□□□□ -1.97
RNU6-640P-201ENST00000363693 HSPA12BQ96MM6 686 aa2.77□□□□□ -1.97
RNU6-640P-201ENST00000363693 WDR18Q9BV38 432 aa2.77□□□□□ -1.97
RNU6-640P-201ENST00000363693 DNAJC25Q9H1X3 360 aa2.77□□□□□ -1.97
RNU6-640P-201ENST00000363693 VPS11Q9H270 941 aa2.77□□□□□ -1.97
RNU6-640P-201ENST00000363693 ZNF552Q9H707 407 aaPredicted RBP2.77□□□□□ -1.97
RNU6-640P-201ENST00000363693 UTP3Q9NQZ2 479 aaKnown RBP eCLIP2.77□□□□□ -1.97
RNU6-640P-201ENST00000363693 SALL4Q9UJQ4 1053 aa2.77□□□□□ -1.97
RNU6-640P-201ENST00000363693 ING1Q9UK53 422 aaPredicted RBP2.77□□□□□ -1.97
RNU6-640P-201ENST00000363693 HS3ST3A1Q9Y663 406 aa2.77□□□□□ -1.97
RNU6-640P-201ENST00000363693 H3BS24 57 aa2.76□□□□□ -1.97
RNU6-640P-201ENST00000363693 TMPRSS2O15393 492 aa2.76□□□□□ -1.97
RNU6-640P-201ENST00000363693 TGFB2P61812 414 aa2.76□□□□□ -1.97
RNU6-640P-201ENST00000363693 RALGPS1Q5JS13 557 aa2.76□□□□□ -1.97
RNU6-640P-201ENST00000363693 AMER1Q5JTC6 1135 aaPredicted RBP2.76□□□□□ -1.97
RNU6-640P-201ENST00000363693 CDKAL1Q5VV42 579 aa2.76□□□□□ -1.97
RNU6-640P-201ENST00000363693 ETFBKMTQ8IXQ9 262 aa2.76□□□□□ -1.97
RNU6-640P-201ENST00000363693 FANCD2OSQ96PS1 177 aa2.76□□□□□ -1.97
RNU6-640P-201ENST00000363693 OSMRQ99650 979 aa2.76□□□□□ -1.97
RNU6-640P-201ENST00000363693 FOXQ1Q9C009 403 aa2.76□□□□□ -1.97
RNU6-640P-201ENST00000363693 PCOLCE2Q9UKZ9 415 aa2.76□□□□□ -1.97
RNU6-640P-201ENST00000363693 FOXO3O43524 673 aa2.75□□□□□ -1.97
RNU6-640P-201ENST00000363693 PPFIA2O75334 1257 aa2.75□□□□□ -1.97
RNU6-640P-201ENST00000363693 ECEL1O95672 775 aa2.75□□□□□ -1.97
RNU6-640P-201ENST00000363693 EPHB3P54753 998 aa2.75□□□□□ -1.97
RNU6-640P-201ENST00000363693 TTLL4Q14679 1199 aa2.75□□□□□ -1.97
RNU6-640P-201ENST00000363693 PLEKHM2Q8IWE5 1019 aa2.75□□□□□ -1.97
RNU6-640P-201ENST00000363693 C1QTNF3Q9BXJ4 246 aa2.75□□□□□ -1.97
RNU6-640P-201ENST00000363693 KRTAP3-1Q9BYR8 98 aa2.75□□□□□ -1.97
RNU6-640P-201ENST00000363693 C19orf44Q9H6X5 657 aa2.75□□□□□ -1.97
RNU6-640P-201ENST00000363693 CWC22Q9HCG8 908 aaKnown RBP2.75□□□□□ -1.97
RNU6-640P-201ENST00000363693 SIRT5Q9NXA8 310 aa2.75□□□□□ -1.97
RNU6-640P-201ENST00000363693 TMEM63CQ9P1W3 806 aa2.75□□□□□ -1.97
RNU6-640P-201ENST00000363693 MKRN1Q9UHC7 482 aaKnown RBP2.75□□□□□ -1.97
RNU6-640P-201ENST00000363693 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP2.75□□□□□ -1.97
RNU6-640P-201ENST00000363693 ITGB3P05106 788 aa2.74□□□□□ -1.97
RNU6-640P-201ENST00000363693 SRSF3P84103 164 aaKnown RBP2.74□□□□□ -1.97
RNU6-640P-201ENST00000363693 ID3Q02535 119 aa2.74□□□□□ -1.97
RNU6-640P-201ENST00000363693 ZNF438Q7Z4V0 828 aa2.74□□□□□ -1.97
RNU6-640P-201ENST00000363693 PHF6Q8IWS0 365 aaKnown RBP eCLIP2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 710.4 ms