RNA–Protein interactions for RNA: ENST00000361917.5

COL11A2-202, Transcript of collagen type XI alpha 2 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL11A2, Length 6,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-202ENST00000361917 HDXQ7Z353 690 aa16.64■□□□□ 0.25
COL11A2-202ENST00000361917 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.64■□□□□ 0.25
COL11A2-202ENST00000361917 CALUO43852 315 aaPredicted RBP16.64■□□□□ 0.25
COL11A2-202ENST00000361917 GAS8O95995 478 aa16.64■□□□□ 0.25
COL11A2-202ENST00000361917 HPDP32754 393 aaPredicted RBP16.64■□□□□ 0.25
COL11A2-202ENST00000361917 CNNM4Q6P4Q7 775 aa16.64■□□□□ 0.25
COL11A2-202ENST00000361917 HIBADHP31937 336 aaKnown RBP16.64■□□□□ 0.25
COL11A2-202ENST00000361917 IRX5P78411 483 aaPredicted RBP16.64■□□□□ 0.25
COL11A2-202ENST00000361917 CTDSPL2Q05D32 466 aa16.64■□□□□ 0.25
COL11A2-202ENST00000361917 UTP14CQ5TAP6 766 aaKnown RBP16.64■□□□□ 0.25
COL11A2-202ENST00000361917 CNBD1Q8NA66 436 aa16.64■□□□□ 0.25
COL11A2-202ENST00000361917 XAGE2Q96GT9 111 aa16.64■□□□□ 0.25
COL11A2-202ENST00000361917 NAP1L3Q99457 506 aaPredicted RBP16.64■□□□□ 0.25
COL11A2-202ENST00000361917 NCKAP5LQ9HCH0 1330 aa16.64■□□□□ 0.25
COL11A2-202ENST00000361917 ANO1Q5XXA6 986 aa16.64■□□□□ 0.25
COL11A2-202ENST00000361917 SH2D4AQ9H788 454 aa16.64■□□□□ 0.25
COL11A2-202ENST00000361917 DUOX2Q9NRD8 1548 aa16.63■□□□□ 0.25
COL11A2-202ENST00000361917 GCP02774 474 aa16.63■□□□□ 0.25
COL11A2-202ENST00000361917 MYCLP12524 364 aaPredicted RBP16.63■□□□□ 0.25
COL11A2-202ENST00000361917 PUM3Q15397 648 aaKnown RBP16.63■□□□□ 0.25
COL11A2-202ENST00000361917 OTUD7AQ8TE49 926 aaPredicted RBP16.63■□□□□ 0.25
COL11A2-202ENST00000361917 PRDM1O75626 825 aa16.63■□□□□ 0.25
COL11A2-202ENST00000361917 ALDH3A1P30838 453 aa16.63■□□□□ 0.25
COL11A2-202ENST00000361917 SMTNP53814 917 aa16.63■□□□□ 0.25
COL11A2-202ENST00000361917 EVCP57679 992 aa16.63■□□□□ 0.25
COL11A2-202ENST00000361917 BIN2Q9UBW5 565 aaPredicted RBP16.63■□□□□ 0.25
COL11A2-202ENST00000361917 KCNH3Q9ULD8 1083 aa16.63■□□□□ 0.25
COL11A2-202ENST00000361917 CRCPO75575 148 aa16.63■□□□□ 0.25
COL11A2-202ENST00000361917 PICK1Q9NRD5 415 aa16.63■□□□□ 0.25
COL11A2-202ENST00000361917 SYNRGQ9UMZ2 1314 aa16.63■□□□□ 0.25
COL11A2-202ENST00000361917 POLR2DO15514 142 aaKnown RBP16.63■□□□□ 0.25
COL11A2-202ENST00000361917 VIMP08670 466 aaKnown RBP16.63■□□□□ 0.25
COL11A2-202ENST00000361917 ERCC5P28715 1186 aaPredicted RBP16.63■□□□□ 0.25
COL11A2-202ENST00000361917 GEN1Q17RS7 908 aa16.63■□□□□ 0.25
COL11A2-202ENST00000361917 FAM204AQ9H8W3 233 aa16.63■□□□□ 0.25
COL11A2-202ENST00000361917 AATFQ9NY61 560 aaKnown RBP eCLIP16.63■□□□□ 0.25
COL11A2-202ENST00000361917 PRAG1Q86YV5 1406 aa16.63■□□□□ 0.25
COL11A2-202ENST00000361917 ERCC3P19447 782 aa16.63■□□□□ 0.25
COL11A2-202ENST00000361917 LONRF3Q496Y0 759 aa16.63■□□□□ 0.25
COL11A2-202ENST00000361917 RILPL1Q5EBL4 403 aa16.63■□□□□ 0.25
COL11A2-202ENST00000361917 CCDC117Q8IWD4 279 aaPredicted RBP16.63■□□□□ 0.25
COL11A2-202ENST00000361917 GPATCH8Q9UKJ3 1502 aaKnown RBP16.63■□□□□ 0.25
COL11A2-202ENST00000361917 PARD3Q8TEW0 1356 aa16.63■□□□□ 0.25
COL11A2-202ENST00000361917 ZWINTO95229 277 aa16.62■□□□□ 0.25
COL11A2-202ENST00000361917 TMOD4Q9NZQ9 345 aa16.62■□□□□ 0.25
COL11A2-202ENST00000361917 TBC1D7Q9P0N9 293 aa16.62■□□□□ 0.25
COL11A2-202ENST00000361917 TUBB4BP68371 445 aa16.62■□□□□ 0.25
COL11A2-202ENST00000361917 OTUD7BQ6GQQ9 843 aa16.62■□□□□ 0.25
COL11A2-202ENST00000361917 MYL10Q9BUA6 226 aa16.62■□□□□ 0.25
COL11A2-202ENST00000361917 BTG4Q9NY30 223 aa16.62■□□□□ 0.25
COL11A2-202ENST00000361917 NKIRAS1Q9NYS0 192 aa16.62■□□□□ 0.25
COL11A2-202ENST00000361917 STRN3Q13033 797 aa16.62■□□□□ 0.25
COL11A2-202ENST00000361917 CYP26C1Q6V0L0 522 aa16.62■□□□□ 0.25
COL11A2-202ENST00000361917 DBNDD2Q9BQY9 259 aa16.62■□□□□ 0.25
COL11A2-202ENST00000361917 EYA2O00167 538 aa16.62■□□□□ 0.25
COL11A2-202ENST00000361917 TAF5LO75529 589 aa16.62■□□□□ 0.25
COL11A2-202ENST00000361917 TRPC3Q13507 836 aa16.62■□□□□ 0.25
COL11A2-202ENST00000361917 ATL3Q6DD88 541 aa16.62■□□□□ 0.25
COL11A2-202ENST00000361917 NAPGQ99747 312 aaPredicted RBP16.62■□□□□ 0.25
COL11A2-202ENST00000361917 TMEM87BQ96K49 555 aa16.62■□□□□ 0.25
COL11A2-202ENST00000361917 FAM227BQ96M60 508 aa16.62■□□□□ 0.25
COL11A2-202ENST00000361917 ARHGEF10LQ9HCE6 1279 aa16.62■□□□□ 0.25
COL11A2-202ENST00000361917 PPARDQ03181 441 aa16.61■□□□□ 0.25
COL11A2-202ENST00000361917 INTS8Q75QN2 995 aaKnown RBP16.61■□□□□ 0.25
COL11A2-202ENST00000361917 CSGALNACT2Q8N6G5 542 aa16.61■□□□□ 0.25
COL11A2-202ENST00000361917 PLBD2Q8NHP8 589 aa16.61■□□□□ 0.25
COL11A2-202ENST00000361917 SNX14Q9Y5W7 946 aa16.61■□□□□ 0.25
COL11A2-202ENST00000361917 A0A1W2PP64 1363 aa16.61■□□□□ 0.25
COL11A2-202ENST00000361917 ARFGAP2Q8N6H7 521 aa16.61■□□□□ 0.25
COL11A2-202ENST00000361917 GPR161Q8N6U8 529 aaKnown RBP16.61■□□□□ 0.25
COL11A2-202ENST00000361917 CCT6BQ92526 530 aa16.61■□□□□ 0.25
COL11A2-202ENST00000361917 IFT74Q96LB3 600 aa16.61■□□□□ 0.25
COL11A2-202ENST00000361917 DTNBO60941 627 aa16.61■□□□□ 0.25
COL11A2-202ENST00000361917 VWA3BQ502W6 1294 aa16.61■□□□□ 0.25
COL11A2-202ENST00000361917 FAM170AA1A519 330 aa16.61■□□□□ 0.25
COL11A2-202ENST00000361917 USH1GQ495M9 461 aa16.61■□□□□ 0.25
COL11A2-202ENST00000361917 HAUS3Q68CZ6 603 aa16.61■□□□□ 0.25
COL11A2-202ENST00000361917 FMNL3Q8IVF7 1028 aa16.61■□□□□ 0.25
COL11A2-202ENST00000361917 METTL22Q9BUU2 404 aaPredicted RBP16.61■□□□□ 0.25
COL11A2-202ENST00000361917 DDX21Q9NR30 783 aaKnown RBP eCLIP16.61■□□□□ 0.25
COL11A2-202ENST00000361917 GINS2Q9Y248 185 aa16.61■□□□□ 0.25
COL11A2-202ENST00000361917 NDUFB9Q9Y6M9 179 aa16.61■□□□□ 0.25
COL11A2-202ENST00000361917 SYCP2Q9BX26 1530 aa16.61■□□□□ 0.25
COL11A2-202ENST00000361917 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.6■□□□□ 0.25
COL11A2-202ENST00000361917 U2AF2P26368 475 aaKnown RBP eCLIP16.6■□□□□ 0.25
COL11A2-202ENST00000361917 BEND3Q5T5X7 828 aa16.6■□□□□ 0.25
COL11A2-202ENST00000361917 PPANQ9NQ55 473 aaKnown RBP16.6■□□□□ 0.25
COL11A2-202ENST00000361917 ZFYVE9O95405 1425 aa16.6■□□□□ 0.25
COL11A2-202ENST00000361917 GPAA1O43292 621 aa16.6■□□□□ 0.25
COL11A2-202ENST00000361917 DAPK3O43293 454 aa16.6■□□□□ 0.25
COL11A2-202ENST00000361917 TTC31Q49AM3 519 aaPredicted RBP16.6■□□□□ 0.25
COL11A2-202ENST00000361917 TTC38Q5R3I4 469 aa16.6■□□□□ 0.25
COL11A2-202ENST00000361917 C8orf74Q6P047 294 aa16.6■□□□□ 0.25
COL11A2-202ENST00000361917 CCDC94Q9BW85 323 aaPredicted RBP16.6■□□□□ 0.25
COL11A2-202ENST00000361917 TRIM31Q9BZY9 425 aa16.6■□□□□ 0.25
COL11A2-202ENST00000361917 ZNF408Q9H9D4 720 aa16.6■□□□□ 0.25
COL11A2-202ENST00000361917 RRAGDQ9NQL2 400 aaPredicted RBP16.6■□□□□ 0.25
COL11A2-202ENST00000361917 A2MP01023 1474 aa16.6■□□□□ 0.25
COL11A2-202ENST00000361917 NOL3O60936 208 aaKnown RBP16.6■□□□□ 0.25
COL11A2-202ENST00000361917 DYMQ7RTS9 669 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms