RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 PPFIA4O75335 1185 aa14.69□□□□□ -0.06
SRGAP3-201ENST00000360413 BAG2O95816 211 aa14.69□□□□□ -0.06
SRGAP3-201ENST00000360413 LIN9Q5TKA1 542 aa14.69□□□□□ -0.06
SRGAP3-201ENST00000360413 SMC5Q8IY18 1101 aa14.69□□□□□ -0.06
SRGAP3-201ENST00000360413 MGARPQ8TDB4 240 aa14.69□□□□□ -0.06
SRGAP3-201ENST00000360413 ECHDC1Q9NTX5 307 aa14.69□□□□□ -0.06
SRGAP3-201ENST00000360413 ATAD2BQ9ULI0 1458 aa14.69□□□□□ -0.06
SRGAP3-201ENST00000360413 KLF18A0A0U1RQI7 1052 aa14.68□□□□□ -0.06
SRGAP3-201ENST00000360413 GNGT1P63211 74 aa14.68□□□□□ -0.06
SRGAP3-201ENST00000360413 RTEL1Q9NZ71 1219 aa14.68□□□□□ -0.06
SRGAP3-201ENST00000360413 TPCN1Q9ULQ1 816 aa14.68□□□□□ -0.06
SRGAP3-201ENST00000360413 IGSF22Q8N9C0 903 aa14.68□□□□□ -0.06
SRGAP3-201ENST00000360413 RILPQ96NA2 401 aa14.68□□□□□ -0.06
SRGAP3-201ENST00000360413 NUCKS1Q9H1E3 243 aaKnown RBP14.68□□□□□ -0.06
SRGAP3-201ENST00000360413 GRIN2BQ13224 1484 aa14.68□□□□□ -0.06
SRGAP3-201ENST00000360413 SDSP20132 328 aa14.68□□□□□ -0.06
SRGAP3-201ENST00000360413 TRIM14Q14142 442 aa14.68□□□□□ -0.06
SRGAP3-201ENST00000360413 ZNF277Q9NRM2 450 aaPredicted RBP14.68□□□□□ -0.06
SRGAP3-201ENST00000360413 MTMR3Q13615 1198 aa14.68□□□□□ -0.06
SRGAP3-201ENST00000360413 KLHDC4Q8TBB5 520 aa14.68□□□□□ -0.06
SRGAP3-201ENST00000360413 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.68□□□□□ -0.06
SRGAP3-201ENST00000360413 MYL5Q02045 173 aa14.68□□□□□ -0.06
SRGAP3-201ENST00000360413 HSP90AA5PQ58FG0 334 aa14.68□□□□□ -0.06
SRGAP3-201ENST00000360413 BRF1Q92994 677 aa14.68□□□□□ -0.06
SRGAP3-201ENST00000360413 RRP36Q96EU6 259 aaKnown RBP14.68□□□□□ -0.06
SRGAP3-201ENST00000360413 CFAP70Q5T0N1 1121 aa14.68□□□□□ -0.06
SRGAP3-201ENST00000360413 PDCD7Q8N8D1 485 aaKnown RBP14.68□□□□□ -0.06
SRGAP3-201ENST00000360413 TRIML1Q8N9V2 468 aa14.67□□□□□ -0.06
SRGAP3-201ENST00000360413 IMPACTQ9P2X3 320 aa14.67□□□□□ -0.06
SRGAP3-201ENST00000360413 CAPS2Q9BXY5 557 aa14.67□□□□□ -0.06
SRGAP3-201ENST00000360413 TRIM31Q9BZY9 425 aa14.67□□□□□ -0.06
SRGAP3-201ENST00000360413 RTN1Q16799 776 aa14.67□□□□□ -0.06
SRGAP3-201ENST00000360413 Q6ZUG5 572 aa14.67□□□□□ -0.06
SRGAP3-201ENST00000360413 LRRC2Q9BYS8 371 aa14.67□□□□□ -0.06
SRGAP3-201ENST00000360413 PIK3R4Q99570 1358 aa14.67□□□□□ -0.06
SRGAP3-201ENST00000360413 CUL7Q14999 1698 aa14.67□□□□□ -0.06
SRGAP3-201ENST00000360413 ZBTB43O43298 467 aa14.67□□□□□ -0.06
SRGAP3-201ENST00000360413 LEO1Q8WVC0 666 aaPredicted RBP14.67□□□□□ -0.06
SRGAP3-201ENST00000360413 CABP1Q9NZU7 370 aa14.67□□□□□ -0.06
SRGAP3-201ENST00000360413 RNF40O75150 1001 aa14.67□□□□□ -0.06
SRGAP3-201ENST00000360413 BRD2P25440 801 aaKnown RBP14.67□□□□□ -0.06
SRGAP3-201ENST00000360413 PPP1R21Q6ZMI0 780 aa14.67□□□□□ -0.06
SRGAP3-201ENST00000360413 N4BP2L2Q92802 583 aaPredicted RBP14.67□□□□□ -0.06
SRGAP3-201ENST00000360413 MRPL46Q9H2W6 279 aaKnown RBP14.67□□□□□ -0.06
SRGAP3-201ENST00000360413 EXOC7Q9UPT5 735 aa14.67□□□□□ -0.06
SRGAP3-201ENST00000360413 F6X3S4 739 aa14.66□□□□□ -0.06
SRGAP3-201ENST00000360413 RRP15Q9Y3B9 282 aaKnown RBP14.66□□□□□ -0.06
SRGAP3-201ENST00000360413 EPB41P11171 864 aaKnown RBP14.66□□□□□ -0.06
SRGAP3-201ENST00000360413 NPHP3Q7Z494 1330 aa14.66□□□□□ -0.06
SRGAP3-201ENST00000360413 ARHGAP42A6NI28 874 aa14.66□□□□□ -0.06
SRGAP3-201ENST00000360413 C8orf34Q49A92 452 aa14.66□□□□□ -0.06
SRGAP3-201ENST00000360413 KRT79Q5XKE5 535 aa14.66□□□□□ -0.06
SRGAP3-201ENST00000360413 KLHL14Q9P2G3 628 aa14.66□□□□□ -0.06
SRGAP3-201ENST00000360413 FGD5Q6ZNL6 1462 aa14.66□□□□□ -0.06
SRGAP3-201ENST00000360413 INPP1P49441 399 aa14.66□□□□□ -0.06
SRGAP3-201ENST00000360413 THUMPD2Q9BTF0 503 aaKnown RBP14.66□□□□□ -0.06
SRGAP3-201ENST00000360413 EXOC5O00471 708 aa14.66□□□□□ -0.06
SRGAP3-201ENST00000360413 RRS1Q15050 365 aaKnown RBP14.66□□□□□ -0.06
SRGAP3-201ENST00000360413 BRD3Q15059 726 aa14.66□□□□□ -0.06
SRGAP3-201ENST00000360413 TEKT1Q969V4 418 aa14.66□□□□□ -0.06
SRGAP3-201ENST00000360413 IQCDQ96DY2 449 aa14.66□□□□□ -0.06
SRGAP3-201ENST00000360413 EFCAB13Q8IY85 973 aa14.66□□□□□ -0.06
SRGAP3-201ENST00000360413 ZC3H15Q8WU90 426 aaKnown RBP14.66□□□□□ -0.06
SRGAP3-201ENST00000360413 ATICP31939 592 aa14.65□□□□□ -0.06
SRGAP3-201ENST00000360413 ZNF75DP51815 510 aa14.65□□□□□ -0.06
SRGAP3-201ENST00000360413 GABPAQ06546 454 aa14.65□□□□□ -0.06
SRGAP3-201ENST00000360413 BCAS4Q8TDM0 211 aa14.65□□□□□ -0.06
SRGAP3-201ENST00000360413 NACA2Q9H009 215 aa14.65□□□□□ -0.06
SRGAP3-201ENST00000360413 KRT71Q3SY84 523 aa14.65□□□□□ -0.06
SRGAP3-201ENST00000360413 SND1Q7KZF4 910 aaKnown RBP eCLIP14.65□□□□□ -0.06
SRGAP3-201ENST00000360413 NSD3Q9BZ95 1437 aa14.65□□□□□ -0.06
SRGAP3-201ENST00000360413 CTNND2Q9UQB3 1225 aa14.65□□□□□ -0.06
SRGAP3-201ENST00000360413 CD2APQ9Y5K6 639 aa14.65□□□□□ -0.06
SRGAP3-201ENST00000360413 RAD50Q92878 1312 aa14.65□□□□□ -0.06
SRGAP3-201ENST00000360413 P4HA1P13674 534 aa14.65□□□□□ -0.06
SRGAP3-201ENST00000360413 GOLGA8KD6RF30 607 aa14.65□□□□□ -0.06
SRGAP3-201ENST00000360413 KRT3P12035 628 aa14.65□□□□□ -0.06
SRGAP3-201ENST00000360413 RAPGEF1Q13905 1077 aa14.65□□□□□ -0.06
SRGAP3-201ENST00000360413 MYD88Q99836 296 aa14.65□□□□□ -0.06
SRGAP3-201ENST00000360413 PPP2R5EQ16537 467 aa14.64□□□□□ -0.07
SRGAP3-201ENST00000360413 GDAP1L1Q96MZ0 367 aa14.64□□□□□ -0.07
SRGAP3-201ENST00000360413 JPH2Q9BR39 696 aaPredicted RBP14.64□□□□□ -0.07
SRGAP3-201ENST00000360413 EFCC1Q9HA90 598 aa14.64□□□□□ -0.07
SRGAP3-201ENST00000360413 SEPT8Q92599 483 aa14.64□□□□□ -0.07
SRGAP3-201ENST00000360413 DAPK3O43293 454 aa14.64□□□□□ -0.07
SRGAP3-201ENST00000360413 SPOPO43791 374 aa14.64□□□□□ -0.07
SRGAP3-201ENST00000360413 ATP1A2P50993 1020 aa14.64□□□□□ -0.07
SRGAP3-201ENST00000360413 RASA3Q14644 834 aa14.64□□□□□ -0.07
SRGAP3-201ENST00000360413 FNBP1Q96RU3 617 aa14.64□□□□□ -0.07
SRGAP3-201ENST00000360413 NAPAP54920 295 aa14.64□□□□□ -0.07
SRGAP3-201ENST00000360413 HSPA8P11142 646 aaKnown RBP14.64□□□□□ -0.07
SRGAP3-201ENST00000360413 SECISBP2LQ93073 1101 aaKnown RBP14.64□□□□□ -0.07
SRGAP3-201ENST00000360413 ESYT1Q9BSJ8 1104 aa14.64□□□□□ -0.07
SRGAP3-201ENST00000360413 KRT15P19012 456 aa14.64□□□□□ -0.07
SRGAP3-201ENST00000360413 NBPF5PQ86XG9 351 aaPredicted RBP14.64□□□□□ -0.07
SRGAP3-201ENST00000360413 YWHAEP62258 255 aaKnown RBP14.64□□□□□ -0.07
SRGAP3-201ENST00000360413 PLS1Q14651 629 aa14.64□□□□□ -0.07
SRGAP3-201ENST00000360413 CFAP221Q4G0U5 840 aa14.64□□□□□ -0.07
SRGAP3-201ENST00000360413 TSC1Q92574 1164 aa14.64□□□□□ -0.07
SRGAP3-201ENST00000360413 TROVE2P10155 538 aaKnown RBP eCLIP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 129.8 ms