RNA–Protein interactions for RNA: ENST00000359889.9

FAM3A-202, Transcript of family with sequence similarity 3 member A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene FAM3A, Length 1,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-202ENST00000359889 USP17L12C9JPN9 530 aa24.59■■□□□ 1.53
FAM3A-202ENST00000359889 USP17L21D6R901 530 aa24.59■■□□□ 1.53
FAM3A-202ENST00000359889 PLCG2P16885 1265 aa24.59■■□□□ 1.53
FAM3A-202ENST00000359889 USP5P45974 858 aa24.59■■□□□ 1.53
FAM3A-202ENST00000359889 SBK1Q52WX2 424 aa24.59■■□□□ 1.53
FAM3A-202ENST00000359889 CTR9Q6PD62 1173 aa24.59■■□□□ 1.53
FAM3A-202ENST00000359889 SGMS1Q86VZ5 419 aa24.59■■□□□ 1.53
FAM3A-202ENST00000359889 CCDC125Q86Z20 511 aa24.59■■□□□ 1.53
FAM3A-202ENST00000359889 IGDCC4Q8TDY8 1250 aa24.59■■□□□ 1.53
FAM3A-202ENST00000359889 UBAC1Q9BSL1 405 aa24.59■■□□□ 1.53
FAM3A-202ENST00000359889 NCOA5Q9HCD5 579 aaKnown RBP24.59■■□□□ 1.53
FAM3A-202ENST00000359889 CDKL5O76039 1030 aa24.58■■□□□ 1.53
FAM3A-202ENST00000359889 CC2D2BQ6DHV5 1058 aa24.58■■□□□ 1.53
FAM3A-202ENST00000359889 INCENPQ9NQS7 918 aa24.58■■□□□ 1.53
FAM3A-202ENST00000359889 QSER1Q2KHR3 1735 aa24.58■■□□□ 1.53
FAM3A-202ENST00000359889 NT5C2P49902 561 aa24.58■■□□□ 1.52
FAM3A-202ENST00000359889 GTF2IP78347 998 aa24.58■■□□□ 1.52
FAM3A-202ENST00000359889 SLC12A7Q9Y666 1083 aa24.58■■□□□ 1.52
FAM3A-202ENST00000359889 ZBTB43O43298 467 aa24.57■■□□□ 1.52
FAM3A-202ENST00000359889 CTDNEP1O95476 244 aa24.57■■□□□ 1.52
FAM3A-202ENST00000359889 MBD3O95983 291 aa24.57■■□□□ 1.52
FAM3A-202ENST00000359889 METAP2P50579 478 aaKnown RBP eCLIP24.57■■□□□ 1.525e-7■■□□□ 13.5
FAM3A-202ENST00000359889 WTAPQ15007 396 aa24.57■■□□□ 1.52
FAM3A-202ENST00000359889 DIXDC1Q155Q3 683 aa24.57■■□□□ 1.52
FAM3A-202ENST00000359889 FOXD4L6Q3SYB3 417 aaPredicted RBP24.57■■□□□ 1.52
FAM3A-202ENST00000359889 FOXD4L3Q6VB84 417 aaPredicted RBP24.57■■□□□ 1.52
FAM3A-202ENST00000359889 GZF1Q9H116 711 aaPredicted RBP24.57■■□□□ 1.52
FAM3A-202ENST00000359889 LY9Q9HBG7 655 aa24.57■■□□□ 1.52
FAM3A-202ENST00000359889 HPS5Q9UPZ3 1129 aa24.57■■□□□ 1.52
FAM3A-202ENST00000359889 DTNBO60941 627 aa24.56■■□□□ 1.52
FAM3A-202ENST00000359889 APOA5Q6Q788 366 aa24.56■■□□□ 1.52
FAM3A-202ENST00000359889 STK11IPQ8N1F8 1099 aa24.56■■□□□ 1.52
FAM3A-202ENST00000359889 FAM163AQ96GL9 167 aaPredicted RBP24.56■■□□□ 1.52
FAM3A-202ENST00000359889 MCM9Q9NXL9 1143 aa24.56■■□□□ 1.52
FAM3A-202ENST00000359889 PDE4BQ07343 736 aa24.55■■□□□ 1.52
FAM3A-202ENST00000359889 CDC37L1Q7L3B6 337 aa24.55■■□□□ 1.52
FAM3A-202ENST00000359889 FBXW7Q969H0 707 aa24.55■■□□□ 1.52
FAM3A-202ENST00000359889 LTBP1Q14766 1721 aa24.55■■□□□ 1.52
FAM3A-202ENST00000359889 FGRP09769 529 aa24.55■■□□□ 1.52
FAM3A-202ENST00000359889 CHRNA5P30532 468 aa24.55■■□□□ 1.52
FAM3A-202ENST00000359889 GRIK5Q16478 980 aa24.55■■□□□ 1.52
FAM3A-202ENST00000359889 OLFM4Q6UX06 510 aa24.55■■□□□ 1.52
FAM3A-202ENST00000359889 IQCA1Q86XH1 822 aa24.55■■□□□ 1.52
FAM3A-202ENST00000359889 ZSCAN16Q9H4T2 348 aaPredicted RBP24.55■■□□□ 1.52
FAM3A-202ENST00000359889 TACC3Q9Y6A5 838 aa24.55■■□□□ 1.52
FAM3A-202ENST00000359889 GPR75-ASB3A0A0A6YYF3 556 aa24.54■■□□□ 1.52
FAM3A-202ENST00000359889 BTDP43251 543 aa24.54■■□□□ 1.52
FAM3A-202ENST00000359889 PODNQ7Z5L7 613 aa24.54■■□□□ 1.52
FAM3A-202ENST00000359889 SH3RF3Q8TEJ3 882 aaPredicted RBP24.54■■□□□ 1.52
FAM3A-202ENST00000359889 RTFDC1Q9BY42 306 aaPredicted RBP24.54■■□□□ 1.52
FAM3A-202ENST00000359889 CCDC88AQ3V6T2 1871 aa24.54■■□□□ 1.52
FAM3A-202ENST00000359889 COL11A2P13942 1736 aaPredicted RBP24.54■■□□□ 1.52
FAM3A-202ENST00000359889 ORC4O43929 436 aa24.53■■□□□ 1.52
FAM3A-202ENST00000359889 RCAN1P53805 252 aa24.53■■□□□ 1.52
FAM3A-202ENST00000359889 GRIPAP1Q4V328 841 aa24.53■■□□□ 1.52
FAM3A-202ENST00000359889 TMEM87AQ8NBN3 555 aa24.53■■□□□ 1.52
FAM3A-202ENST00000359889 SUPT20HQ8NEM7 779 aa24.53■■□□□ 1.52
FAM3A-202ENST00000359889 CHAMP1Q96JM3 812 aa24.53■■□□□ 1.52
FAM3A-202ENST00000359889 CYP2D7A0A087X1C5 515 aa24.52■■□□□ 1.52
FAM3A-202ENST00000359889 GOLGA8AA7E2F4 631 aa24.52■■□□□ 1.52
FAM3A-202ENST00000359889 RANBP6O60518 1105 aaKnown RBP24.52■■□□□ 1.52
FAM3A-202ENST00000359889 DOK7Q18PE1 504 aa24.52■■□□□ 1.52
FAM3A-202ENST00000359889 MICU3Q86XE3 530 aa24.52■■□□□ 1.52
FAM3A-202ENST00000359889 KRT85P78386 507 aa24.52■■□□□ 1.52
FAM3A-202ENST00000359889 NKX2-3Q8TAU0 364 aa24.52■■□□□ 1.52
FAM3A-202ENST00000359889 CCDC196A0A1B0GTZ2 297 aa24.51■■□□□ 1.51
FAM3A-202ENST00000359889 USP48Q86UV5 1035 aa24.51■■□□□ 1.51
FAM3A-202ENST00000359889 FERMT3Q86UX7 667 aa24.51■■□□□ 1.51
FAM3A-202ENST00000359889 ZSCAN10Q96SZ4 725 aaPredicted RBP24.51■■□□□ 1.51
FAM3A-202ENST00000359889 ORC3Q9UBD5 711 aaPredicted RBP24.51■■□□□ 1.51
FAM3A-202ENST00000359889 CNPY2Q9Y2B0 182 aa24.51■■□□□ 1.51
FAM3A-202ENST00000359889 GAKO14976 1311 aa24.51■■□□□ 1.51
FAM3A-202ENST00000359889 RAB11FIP4Q86YS3 637 aa24.5■■□□□ 1.51
FAM3A-202ENST00000359889 TEX11Q8IYF3 940 aa24.5■■□□□ 1.51
FAM3A-202ENST00000359889 RGS22Q8NE09 1264 aa24.5■■□□□ 1.51
FAM3A-202ENST00000359889 TGFBRAP1Q8WUH2 860 aa24.5■■□□□ 1.51
FAM3A-202ENST00000359889 ZKSCAN3Q9BRR0 538 aa24.5■■□□□ 1.51
FAM3A-202ENST00000359889 ZNF287Q9HBT7 754 aa24.5■■□□□ 1.51
FAM3A-202ENST00000359889 KIAA1551Q9HCM1 1747 aa24.5■■□□□ 1.51
FAM3A-202ENST00000359889 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.5■■□□□ 1.51
FAM3A-202ENST00000359889 DNM1Q05193 864 aaKnown RBP24.49■■□□□ 1.51
FAM3A-202ENST00000359889 PPP2R5BQ15173 497 aa24.49■■□□□ 1.51
FAM3A-202ENST00000359889 C12orf60Q5U649 245 aa24.49■■□□□ 1.51
FAM3A-202ENST00000359889 ZNF219Q9P2Y4 722 aaPredicted RBP24.49■■□□□ 1.51
FAM3A-202ENST00000359889 MKRN1Q9UHC7 482 aaKnown RBP24.49■■□□□ 1.51
FAM3A-202ENST00000359889 C10orf71Q711Q0 1435 aa24.49■■□□□ 1.51
FAM3A-202ENST00000359889 TNKSO95271 1327 aa24.49■■□□□ 1.51
FAM3A-202ENST00000359889 POLR3DP05423 398 aaPredicted RBP24.48■■□□□ 1.51
FAM3A-202ENST00000359889 C8orf76Q96K31 380 aa24.48■■□□□ 1.51
FAM3A-202ENST00000359889 SENP2Q9HC62 589 aa24.48■■□□□ 1.51
FAM3A-202ENST00000359889 FIBPO43427 364 aa24.47■■□□□ 1.51
FAM3A-202ENST00000359889 PRDM1O75626 825 aa24.47■■□□□ 1.51
FAM3A-202ENST00000359889 USP17L8P0C7I0 530 aa24.47■■□□□ 1.51
FAM3A-202ENST00000359889 IFIT1BQ5T764 474 aaKnown RBP24.47■■□□□ 1.51
FAM3A-202ENST00000359889 TTLL6Q8N841 843 aa24.47■■□□□ 1.51
FAM3A-202ENST00000359889 C7orf43Q8WVR3 580 aa24.47■■□□□ 1.51
FAM3A-202ENST00000359889 SYAP1Q96A49 352 aaPredicted RBP24.47■■□□□ 1.51
FAM3A-202ENST00000359889 SCAND2PQ9GZW5 306 aaPredicted RBP24.47■■□□□ 1.51
FAM3A-202ENST00000359889 GDPD2Q9HCC8 539 aa24.47■■□□□ 1.51
FAM3A-202ENST00000359889 TTF2Q9UNY4 1162 aaKnown RBP24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms