RNA–Protein interactions for RNA: ENST00000359551.6

SHARPIN-201, Transcript of SHANK associated RH domain interactor, humanhuman

TSL 1 (best)

Gene SHARPIN, Length 1,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-201ENST00000359551 USP17L21D6R901 530 aa29.5■■■□□ 2.31
SHARPIN-201ENST00000359551 USP17L8P0C7I0 530 aa29.5■■■□□ 2.31
SHARPIN-201ENST00000359551 FLT1P17948 1338 aa29.5■■■□□ 2.31
SHARPIN-201ENST00000359551 CFAP100Q494V2 611 aa29.5■■■□□ 2.31
SHARPIN-201ENST00000359551 STAG1Q8WVM7 1258 aa29.5■■■□□ 2.31
SHARPIN-201ENST00000359551 ALDH8A1Q9H2A2 487 aaPredicted RBP29.5■■■□□ 2.31
SHARPIN-201ENST00000359551 USP40Q9NVE5 1235 aa29.5■■■□□ 2.31
SHARPIN-201ENST00000359551 WDHD1O75717 1129 aaPredicted RBP29.49■■■□□ 2.31
SHARPIN-201ENST00000359551 MCM2P49736 904 aa29.49■■■□□ 2.31
SHARPIN-201ENST00000359551 OGFOD1Q8N543 542 aa29.49■■■□□ 2.31
SHARPIN-201ENST00000359551 PCDHAC2Q9Y5I4 1007 aa29.49■■■□□ 2.31
SHARPIN-201ENST00000359551 CTDSPL2Q05D32 466 aa29.48■■■□□ 2.31
SHARPIN-201ENST00000359551 AKNAD1Q5T1N1 836 aa29.48■■■□□ 2.31
SHARPIN-201ENST00000359551 MTMR14Q8NCE2 650 aa29.48■■■□□ 2.31
SHARPIN-201ENST00000359551 NCOA7Q8NI08 942 aa29.48■■■□□ 2.31
SHARPIN-201ENST00000359551 MCM9Q9NXL9 1143 aa29.48■■■□□ 2.31
SHARPIN-201ENST00000359551 ZNF541Q9H0D2 1346 aa29.47■■■□□ 2.31
SHARPIN-201ENST00000359551 MINDY4BA8MYZ0 360 aa29.47■■■□□ 2.31
SHARPIN-201ENST00000359551 RBM5P52756 815 aaKnown RBP eCLIP29.47■■■□□ 2.31
SHARPIN-201ENST00000359551 DHX32Q7L7V1 743 aaKnown RBP29.47■■■□□ 2.31
SHARPIN-201ENST00000359551 MAPKAPK5Q8IW41 473 aa29.47■■■□□ 2.31
SHARPIN-201ENST00000359551 PDRG1Q9NUG6 133 aa29.47■■■□□ 2.31
SHARPIN-201ENST00000359551 TACC3Q9Y6A5 838 aa29.47■■■□□ 2.31
SHARPIN-201ENST00000359551 K7ELQ4 463 aaPredicted RBP29.47■■■□□ 2.31
SHARPIN-201ENST00000359551 EXOSC10Q01780 885 aaKnown RBP29.47■■■□□ 2.31
SHARPIN-201ENST00000359551 MB21D2Q8IYB1 491 aaPredicted RBP29.47■■■□□ 2.31
SHARPIN-201ENST00000359551 DPF2Q92785 391 aa29.47■■■□□ 2.31
SHARPIN-201ENST00000359551 FGRP09769 529 aa29.46■■■□□ 2.31
SHARPIN-201ENST00000359551 C12orf60Q5U649 245 aa29.46■■■□□ 2.31
SHARPIN-201ENST00000359551 RNF41Q9H4P4 317 aaPredicted RBP29.46■■■□□ 2.31
SHARPIN-201ENST00000359551 ROBO3Q96MS0 1386 aa29.45■■■□□ 2.31
SHARPIN-201ENST00000359551 CYP2D7A0A087X1C5 515 aa29.45■■■□□ 2.31
SHARPIN-201ENST00000359551 SPDYE2BA6NHP3 402 aa29.45■■■□□ 2.31
SHARPIN-201ENST00000359551 NPM3O75607 178 aaKnown RBP29.45■■■□□ 2.31
SHARPIN-201ENST00000359551 SPDYE6P0CI01 402 aa29.45■■■□□ 2.31
SHARPIN-201ENST00000359551 PCP11498 1178 aaKnown RBP29.45■■■□□ 2.31
SHARPIN-201ENST00000359551 ZNF280AP59817 542 aaPredicted RBP29.45■■■□□ 2.31
SHARPIN-201ENST00000359551 TRDNQ13061 729 aa29.45■■■□□ 2.31
SHARPIN-201ENST00000359551 PRMT6Q96LA8 375 aaPredicted RBP29.45■■■□□ 2.31
SHARPIN-201ENST00000359551 IDI2Q9BXS1 227 aa29.45■■■□□ 2.31
SHARPIN-201ENST00000359551 CNNM2Q9H8M5 875 aa29.45■■■□□ 2.31
SHARPIN-201ENST00000359551 NEDD4P46934 1319 aa29.45■■■□□ 2.3
SHARPIN-201ENST00000359551 WDR19Q8NEZ3 1342 aa29.45■■■□□ 2.3
SHARPIN-201ENST00000359551 AK2P54819 239 aa29.44■■■□□ 2.3
SHARPIN-201ENST00000359551 MFSD6Q6ZSS7 791 aa29.44■■■□□ 2.3
SHARPIN-201ENST00000359551 RALYLQ86SE5 291 aaKnown RBP29.44■■■□□ 2.3
SHARPIN-201ENST00000359551 ZBED3Q96IU2 234 aaPredicted RBP29.44■■■□□ 2.3
SHARPIN-201ENST00000359551 DDX4Q9NQI0 724 aaKnown RBP29.44■■■□□ 2.3
SHARPIN-201ENST00000359551 SMIM22K7EJ46 135 aa29.44■■■□□ 2.3
SHARPIN-201ENST00000359551 CYP2D6P10635 497 aa29.44■■■□□ 2.3
SHARPIN-201ENST00000359551 DLGAP5Q15398 846 aa29.43■■■□□ 2.3
SHARPIN-201ENST00000359551 AMOTL1Q8IY63 956 aa29.43■■■□□ 2.3
SHARPIN-201ENST00000359551 FBXL16Q8N461 479 aa29.43■■■□□ 2.3
SHARPIN-201ENST00000359551 KRT23Q9C075 422 aa29.43■■■□□ 2.3
SHARPIN-201ENST00000359551 GMPSP49915 693 aaPredicted RBP29.42■■■□□ 2.3
SHARPIN-201ENST00000359551 MCM5P33992 734 aa29.41■■■□□ 2.3
SHARPIN-201ENST00000359551 SLC4A3P48751 1232 aa29.41■■■□□ 2.3
SHARPIN-201ENST00000359551 EVX2Q03828 476 aa29.41■■■□□ 2.3
SHARPIN-201ENST00000359551 GPR162Q16538 588 aa29.41■■■□□ 2.3
SHARPIN-201ENST00000359551 GPC2Q8N158 579 aa29.41■■■□□ 2.3
SHARPIN-201ENST00000359551 TCEANC2Q96MN5 208 aa29.41■■■□□ 2.3
SHARPIN-201ENST00000359551 AGXT2Q9BYV1 514 aa29.41■■■□□ 2.3
SHARPIN-201ENST00000359551 TDRD3Q9H7E2 651 aaKnown RBP29.41■■■□□ 2.3
SHARPIN-201ENST00000359551 INCENPQ9NQS7 918 aa29.41■■■□□ 2.3
SHARPIN-201ENST00000359551 RNF181Q9P0P0 153 aa29.41■■■□□ 2.3
SHARPIN-201ENST00000359551 DDX52Q9Y2R4 599 aaKnown RBP eCLIP29.41■■■□□ 2.3
SHARPIN-201ENST00000359551 GJA3Q9Y6H8 435 aa29.41■■■□□ 2.3
SHARPIN-201ENST00000359551 SLC3A2P08195 630 aaKnown RBP29.4■■■□□ 2.3
SHARPIN-201ENST00000359551 NFIAQ12857 509 aa29.4■■■□□ 2.3
SHARPIN-201ENST00000359551 ANKRD1Q15327 319 aa29.4■■■□□ 2.3
SHARPIN-201ENST00000359551 OSBPL5Q9H0X9 879 aaPredicted RBP29.4■■■□□ 2.3
SHARPIN-201ENST00000359551 DAXXQ9UER7 740 aaPredicted RBP29.4■■■□□ 2.3
SHARPIN-201ENST00000359551 SAP30BPQ9UHR5 308 aaKnown RBP29.4■■■□□ 2.3
SHARPIN-201ENST00000359551 B4E1Z4 1266 aa29.4■■■□□ 2.3
SHARPIN-201ENST00000359551 GRIN3BO60391 1043 aa29.4■■■□□ 2.3
SHARPIN-201ENST00000359551 POLR3DP05423 398 aaPredicted RBP29.4■■■□□ 2.3
SHARPIN-201ENST00000359551 ANTXR2P58335 489 aa29.4■■■□□ 2.3
SHARPIN-201ENST00000359551 PICALMQ13492 652 aa29.4■■■□□ 2.3
SHARPIN-201ENST00000359551 TOB2Q14106 344 aaPredicted RBP29.4■■■□□ 2.3
SHARPIN-201ENST00000359551 NKX2-3Q8TAU0 364 aa29.4■■■□□ 2.3
SHARPIN-201ENST00000359551 MYOZ2Q9NPC6 264 aa29.4■■■□□ 2.3
SHARPIN-201ENST00000359551 COL2A1P02458 1487 aaPredicted RBP29.39■■■□□ 2.3
SHARPIN-201ENST00000359551 ORC4O43929 436 aa29.39■■■□□ 2.3
SHARPIN-201ENST00000359551 FAM198AQ9UFP1 575 aa29.39■■■□□ 2.3
SHARPIN-201ENST00000359551 SIPA1L1O43166 1804 aa29.39■■■□□ 2.29
SHARPIN-201ENST00000359551 NT5C2P49902 561 aa29.38■■■□□ 2.29
SHARPIN-201ENST00000359551 PLCD1P51178 756 aa29.38■■■□□ 2.29
SHARPIN-201ENST00000359551 C9orf131Q5VYM1 1079 aa29.38■■■□□ 2.29
SHARPIN-201ENST00000359551 LIMCH1Q9UPQ0 1083 aa29.38■■■□□ 2.29
SHARPIN-201ENST00000359551 SHTN1A0MZ66 631 aa29.37■■■□□ 2.29
SHARPIN-201ENST00000359551 PRC1O43663 620 aa29.37■■■□□ 2.29
SHARPIN-201ENST00000359551 SPDYE2Q495Y8 402 aa29.37■■■□□ 2.29
SHARPIN-201ENST00000359551 Q6ZUG5 572 aa29.37■■■□□ 2.29
SHARPIN-201ENST00000359551 CYB5R4Q7L1T6 521 aa29.37■■■□□ 2.29
SHARPIN-201ENST00000359551 TMX3Q96JJ7 454 aa29.37■■■□□ 2.29
SHARPIN-201ENST00000359551 MYH8P13535 1937 aa29.37■■■□□ 2.29
SHARPIN-201ENST00000359551 ENTPD3O75355 529 aa29.37■■■□□ 2.29
SHARPIN-201ENST00000359551 MICALL2Q8IY33 904 aa29.37■■■□□ 2.29
SHARPIN-201ENST00000359551 CNOT7Q9UIV1 285 aaKnown RBP29.37■■■□□ 2.29
SHARPIN-201ENST00000359551 KDM4AO75164 1064 aa29.36■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms