RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 NEK1Q96PY6 1258 aa16.43■□□□□ 0.22
PDLIM5-203ENST00000359265 RIOK1Q9BRS2 568 aaKnown RBP16.43■□□□□ 0.22
PDLIM5-203ENST00000359265 ZNF277Q9NRM2 450 aaPredicted RBP16.43■□□□□ 0.22
PDLIM5-203ENST00000359265 THSD7BQ9C0I4 1608 aa16.43■□□□□ 0.22
PDLIM5-203ENST00000359265 GSG1L2A8MUP6 293 aa16.42■□□□□ 0.22
PDLIM5-203ENST00000359265 TDO2P48775 406 aa16.42■□□□□ 0.22
PDLIM5-203ENST00000359265 FKBP1AP62942 108 aaKnown RBP16.42■□□□□ 0.22
PDLIM5-203ENST00000359265 FMR1Q06787 632 aaKnown RBP eCLIP16.42■□□□□ 0.22
PDLIM5-203ENST00000359265 EAPPQ56P03 285 aaPredicted RBP16.42■□□□□ 0.22
PDLIM5-203ENST00000359265 MAP1SQ66K74 1059 aaPredicted RBP16.42■□□□□ 0.22
PDLIM5-203ENST00000359265 CERS3Q8IU89 383 aa16.42■□□□□ 0.22
PDLIM5-203ENST00000359265 JDP2Q8WYK2 163 aa16.42■□□□□ 0.22
PDLIM5-203ENST00000359265 CAPNS2Q96L46 248 aa16.42■□□□□ 0.22
PDLIM5-203ENST00000359265 CRNKL1Q9BZJ0 848 aaKnown RBP16.42■□□□□ 0.22
PDLIM5-203ENST00000359265 EPB41L4AQ9HCS5 686 aaPredicted RBP16.42■□□□□ 0.22
PDLIM5-203ENST00000359265 ABT1Q9ULW3 272 aaKnown RBP16.42■□□□□ 0.22
PDLIM5-203ENST00000359265 TAF6LQ9Y6J9 622 aa16.42■□□□□ 0.22
PDLIM5-203ENST00000359265 MYH1P12882 1939 aa16.42■□□□□ 0.22
PDLIM5-203ENST00000359265 SCN4AP35499 1836 aa16.42■□□□□ 0.22
PDLIM5-203ENST00000359265 MROH7-TTC4A0A0A0MT08 1334 aa16.42■□□□□ 0.22
PDLIM5-203ENST00000359265 ADAMTSL1Q8N6G6 1762 aa16.41■□□□□ 0.22
PDLIM5-203ENST00000359265 USP17L3A6NCW0 530 aa16.41■□□□□ 0.22
PDLIM5-203ENST00000359265 USP17L4A6NCW7 530 aa16.41■□□□□ 0.22
PDLIM5-203ENST00000359265 E7EWF7 191 aa16.41■□□□□ 0.22
PDLIM5-203ENST00000359265 CPA1P15085 419 aa16.41■□□□□ 0.22
PDLIM5-203ENST00000359265 AK2P54819 239 aa16.41■□□□□ 0.22
PDLIM5-203ENST00000359265 SOX10P56693 466 aa16.41■□□□□ 0.22
PDLIM5-203ENST00000359265 HAND2P61296 217 aa16.41■□□□□ 0.22
PDLIM5-203ENST00000359265 DYNLL1P63167 89 aaKnown RBP16.41■□□□□ 0.22
PDLIM5-203ENST00000359265 DGKZQ13574 1117 aa16.41■□□□□ 0.22
PDLIM5-203ENST00000359265 ANKRD1Q15327 319 aa16.41■□□□□ 0.22
PDLIM5-203ENST00000359265 STRIP1Q5VSL9 837 aa16.41■□□□□ 0.22
PDLIM5-203ENST00000359265 CYP4F22Q6NT55 531 aa16.41■□□□□ 0.22
PDLIM5-203ENST00000359265 STOX1Q6ZVD7 989 aa16.41■□□□□ 0.22
PDLIM5-203ENST00000359265 USP17L1Q7RTZ2 530 aa16.41■□□□□ 0.22
PDLIM5-203ENST00000359265 BEGAINQ9BUH8 593 aa16.41■□□□□ 0.22
PDLIM5-203ENST00000359265 DDX60LQ5H9U9 1706 aaKnown RBP16.41■□□□□ 0.22
PDLIM5-203ENST00000359265 PRKAB2O43741 272 aa16.4■□□□□ 0.22
PDLIM5-203ENST00000359265 BAG3O95817 575 aa16.4■□□□□ 0.22
PDLIM5-203ENST00000359265 GRIK5Q16478 980 aa16.4■□□□□ 0.22
PDLIM5-203ENST00000359265 GIMAP6Q6P9H5 292 aa16.4■□□□□ 0.22
PDLIM5-203ENST00000359265 NOL8Q76FK4 1167 aaKnown RBP16.4■□□□□ 0.22
PDLIM5-203ENST00000359265 L3MBTL3Q96JM7 780 aaPredicted RBP16.4■□□□□ 0.22
PDLIM5-203ENST00000359265 ALDH8A1Q9H2A2 487 aaPredicted RBP16.4■□□□□ 0.22
PDLIM5-203ENST00000359265 AATFQ9NY61 560 aaKnown RBP eCLIP16.4■□□□□ 0.22
PDLIM5-203ENST00000359265 CLEC11AQ9Y240 323 aa16.4■□□□□ 0.22
PDLIM5-203ENST00000359265 IQCA1LA6NCM1 817 aa16.39■□□□□ 0.21
PDLIM5-203ENST00000359265 GRM1Q13255 1194 aa16.39■□□□□ 0.21
PDLIM5-203ENST00000359265 DIXDC1Q155Q3 683 aa16.39■□□□□ 0.21
PDLIM5-203ENST00000359265 RALYLQ86SE5 291 aaKnown RBP16.39■□□□□ 0.21
PDLIM5-203ENST00000359265 SPRYD3Q8NCJ5 442 aa16.39■□□□□ 0.21
PDLIM5-203ENST00000359265 NCOA7Q8NI08 942 aa16.39■□□□□ 0.21
PDLIM5-203ENST00000359265 TMX3Q96JJ7 454 aa16.39■□□□□ 0.21
PDLIM5-203ENST00000359265 SLKQ9H2G2 1235 aaPredicted RBP16.39■□□□□ 0.21
PDLIM5-203ENST00000359265 ZNRF3Q9ULT6 936 aa16.39■□□□□ 0.21
PDLIM5-203ENST00000359265 LIMCH1Q9UPQ0 1083 aa16.39■□□□□ 0.21
PDLIM5-203ENST00000359265 MYO3BQ8WXR4 1341 aa16.39■□□□□ 0.21
PDLIM5-203ENST00000359265 AOC2O75106 756 aa16.38■□□□□ 0.21
PDLIM5-203ENST00000359265 PLCG2P16885 1265 aa16.38■□□□□ 0.21
PDLIM5-203ENST00000359265 PPP4CP60510 307 aa16.38■□□□□ 0.21
PDLIM5-203ENST00000359265 TRDNQ13061 729 aa16.38■□□□□ 0.21
PDLIM5-203ENST00000359265 DHX32Q7L7V1 743 aaKnown RBP16.38■□□□□ 0.21
PDLIM5-203ENST00000359265 SDR42E1Q8WUS8 393 aa16.38■□□□□ 0.21
PDLIM5-203ENST00000359265 ZSCAN31Q96LW9 406 aaPredicted RBP16.38■□□□□ 0.21
PDLIM5-203ENST00000359265 ATP8A2Q9NTI2 1148 aa16.38■□□□□ 0.21
PDLIM5-203ENST00000359265 GAKO14976 1311 aa16.38■□□□□ 0.21
PDLIM5-203ENST00000359265 COL4A5P29400 1685 aa16.37■□□□□ 0.21
PDLIM5-203ENST00000359265 MYH8P13535 1937 aa16.37■□□□□ 0.21
PDLIM5-203ENST00000359265 FAM163AQ96GL9 167 aaPredicted RBP16.37■□□□□ 0.21
PDLIM5-203ENST00000359265 SH2B1Q9NRF2 756 aaPredicted RBP16.37■□□□□ 0.21
PDLIM5-203ENST00000359265 GPR75-ASB3A0A0A6YYF3 556 aa16.36■□□□□ 0.21
PDLIM5-203ENST00000359265 YDJCA8MPS7 323 aa16.36■□□□□ 0.21
PDLIM5-203ENST00000359265 BTDP43251 543 aa16.36■□□□□ 0.21
PDLIM5-203ENST00000359265 FGD1P98174 961 aa16.36■□□□□ 0.21
PDLIM5-203ENST00000359265 CUL4AQ13619 759 aa16.36■□□□□ 0.21
PDLIM5-203ENST00000359265 DACT2Q5SW24 774 aa16.36■□□□□ 0.21
PDLIM5-203ENST00000359265 TBC1D10CQ8IV04 446 aa16.36■□□□□ 0.21
PDLIM5-203ENST00000359265 CERS5Q8N5B7 392 aa16.36■□□□□ 0.21
PDLIM5-203ENST00000359265 NBPF3Q9H094 633 aa16.36■□□□□ 0.21
PDLIM5-203ENST00000359265 RNF41Q9H4P4 317 aaPredicted RBP16.36■□□□□ 0.21
PDLIM5-203ENST00000359265 TTF2Q9UNY4 1162 aaKnown RBP16.36■□□□□ 0.21
PDLIM5-203ENST00000359265 WDR19Q8NEZ3 1342 aa16.36■□□□□ 0.21
PDLIM5-203ENST00000359265 MCM5P33992 734 aa16.35■□□□□ 0.21
PDLIM5-203ENST00000359265 EPHX2P34913 555 aa16.35■□□□□ 0.21
PDLIM5-203ENST00000359265 PPARAQ07869 468 aa16.35■□□□□ 0.21
PDLIM5-203ENST00000359265 AKNAD1Q5T1N1 836 aa16.35■□□□□ 0.21
PDLIM5-203ENST00000359265 PAXIP1Q6ZW49 1069 aaPredicted RBP16.35■□□□□ 0.21
PDLIM5-203ENST00000359265 MB21D2Q8IYB1 491 aaPredicted RBP16.35■□□□□ 0.21
PDLIM5-203ENST00000359265 STAG1Q8WVM7 1258 aa16.35■□□□□ 0.21
PDLIM5-203ENST00000359265 TCEANC2Q96MN5 208 aa16.35■□□□□ 0.21
PDLIM5-203ENST00000359265 CNNM2Q9H8M5 875 aa16.35■□□□□ 0.21
PDLIM5-203ENST00000359265 FOXD4L1Q9NU39 408 aa16.35■□□□□ 0.21
PDLIM5-203ENST00000359265 ARPP21Q9UBL0 812 aaPredicted RBP16.35■□□□□ 0.21
PDLIM5-203ENST00000359265 ANAPC4Q9UJX5 808 aa16.35■□□□□ 0.21
PDLIM5-203ENST00000359265 CIZ1Q9ULV3 898 aaPredicted RBP16.35■□□□□ 0.21
PDLIM5-203ENST00000359265 F8W031 263 aaPredicted RBP16.34■□□□□ 0.21
PDLIM5-203ENST00000359265 USP5P45974 858 aa16.34■□□□□ 0.21
PDLIM5-203ENST00000359265 EIF6P56537 245 aaKnown RBP16.34■□□□□ 0.21
PDLIM5-203ENST00000359265 EXOSC10Q01780 885 aaKnown RBP16.34■□□□□ 0.21
PDLIM5-203ENST00000359265 TOB2Q14106 344 aaPredicted RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms