RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 FAF1Q9UNN5 650 aaPredicted RBP14.32□□□□□ -0.12
SMC4-202ENST00000357388 CFAP221Q4G0U5 840 aa14.32□□□□□ -0.12
SMC4-202ENST00000357388 TBC1D31Q96DN5 1066 aa14.32□□□□□ -0.12
SMC4-202ENST00000357388 RRP36Q96EU6 259 aaKnown RBP14.32□□□□□ -0.12
SMC4-202ENST00000357388 ANKRD2Q9GZV1 360 aa14.32□□□□□ -0.12
SMC4-202ENST00000357388 MED4Q9NPJ6 270 aa14.32□□□□□ -0.12
SMC4-202ENST00000357388 ALDH1L1O75891 902 aa14.32□□□□□ -0.12
SMC4-202ENST00000357388 ERCC3P19447 782 aa14.32□□□□□ -0.12
SMC4-202ENST00000357388 SNCBQ16143 134 aa14.31□□□□□ -0.12
SMC4-202ENST00000357388 PPP2R5EQ16537 467 aa14.31□□□□□ -0.12
SMC4-202ENST00000357388 SPOPO43791 374 aa14.31□□□□□ -0.12
SMC4-202ENST00000357388 PLCD1P51178 756 aa14.31□□□□□ -0.12
SMC4-202ENST00000357388 PICALMQ13492 652 aa14.31□□□□□ -0.12
SMC4-202ENST00000357388 NCAPGQ9BPX3 1015 aa14.31□□□□□ -0.12
SMC4-202ENST00000357388 RAB17Q9H0T7 212 aa14.31□□□□□ -0.12
SMC4-202ENST00000357388 RBSNQ9H1K0 784 aa14.31□□□□□ -0.12
SMC4-202ENST00000357388 PFDN4Q9NQP4 134 aa14.31□□□□□ -0.12
SMC4-202ENST00000357388 DDX21Q9NR30 783 aaKnown RBP eCLIP14.31□□□□□ -0.121e-26■■■■■ 198.7
SMC4-202ENST00000357388 KLHL14Q9P2G3 628 aa14.31□□□□□ -0.12
SMC4-202ENST00000357388 ADGRL1O94910 1474 aa14.31□□□□□ -0.12
SMC4-202ENST00000357388 F8W031 263 aaPredicted RBP14.31□□□□□ -0.12
SMC4-202ENST00000357388 CCDC65Q8IXS2 484 aa14.31□□□□□ -0.12
SMC4-202ENST00000357388 CCDC51Q96ER9 411 aa14.31□□□□□ -0.12
SMC4-202ENST00000357388 ATP8B1O43520 1251 aa14.31□□□□□ -0.12
SMC4-202ENST00000357388 EPB41P11171 864 aaKnown RBP14.31□□□□□ -0.12
SMC4-202ENST00000357388 UAP1Q16222 522 aaPredicted RBP14.31□□□□□ -0.12
SMC4-202ENST00000357388 LIN9Q5TKA1 542 aa14.31□□□□□ -0.12
SMC4-202ENST00000357388 NOC4LQ9BVI4 516 aaKnown RBP14.31□□□□□ -0.12
SMC4-202ENST00000357388 NIP7Q9Y221 180 aaKnown RBP eCLIP14.31□□□□□ -0.121e-7■■■■■ 83.2
SMC4-202ENST00000357388 RIPOR2Q9Y4F9 1068 aa14.31□□□□□ -0.12
SMC4-202ENST00000357388 STK10O94804 968 aaKnown RBP14.31□□□□□ -0.12
SMC4-202ENST00000357388 MLKLQ8NB16 471 aa14.31□□□□□ -0.12
SMC4-202ENST00000357388 TTC16Q8NEE8 873 aa14.31□□□□□ -0.12
SMC4-202ENST00000357388 NUCKS1Q9H1E3 243 aaKnown RBP14.31□□□□□ -0.12
SMC4-202ENST00000357388 RTCBQ9Y3I0 505 aaKnown RBP14.31□□□□□ -0.12
SMC4-202ENST00000357388 RALGAPBQ86X10 1494 aa14.3□□□□□ -0.12
SMC4-202ENST00000357388 TNFAIP3P21580 790 aa14.3□□□□□ -0.12
SMC4-202ENST00000357388 ASIC2Q16515 512 aa14.3□□□□□ -0.12
SMC4-202ENST00000357388 DTHD1Q6ZMT9 781 aa14.3□□□□□ -0.12
SMC4-202ENST00000357388 HOMER3Q9NSC5 361 aa14.3□□□□□ -0.12
SMC4-202ENST00000357388 GNA11P29992 359 aa14.3□□□□□ -0.12
SMC4-202ENST00000357388 STX17P56962 302 aa14.3□□□□□ -0.12
SMC4-202ENST00000357388 RUFY3Q7L099 469 aa14.3□□□□□ -0.12
SMC4-202ENST00000357388 MAGEB6P1A0A0J9YX57 407 aa14.3□□□□□ -0.12
SMC4-202ENST00000357388 WHAMMQ8TF30 809 aa14.3□□□□□ -0.12
SMC4-202ENST00000357388 FANCCQ00597 558 aa14.29□□□□□ -0.12
SMC4-202ENST00000357388 TBC1D8BQ0IIM8 1120 aa14.29□□□□□ -0.12
SMC4-202ENST00000357388 GEN1Q17RS7 908 aa14.29□□□□□ -0.12
SMC4-202ENST00000357388 SLC4A8Q2Y0W8 1093 aa14.29□□□□□ -0.12
SMC4-202ENST00000357388 DENND2CQ68D51 928 aa14.29□□□□□ -0.12
SMC4-202ENST00000357388 CNNM4Q6P4Q7 775 aa14.29□□□□□ -0.12
SMC4-202ENST00000357388 ZRANB1Q9UGI0 708 aa14.29□□□□□ -0.12
SMC4-202ENST00000357388 STK24Q9Y6E0 443 aa14.29□□□□□ -0.12
SMC4-202ENST00000357388 GIPC1O14908 333 aa14.29□□□□□ -0.12
SMC4-202ENST00000357388 AK2P54819 239 aa14.29□□□□□ -0.12
SMC4-202ENST00000357388 SLC8A3P57103 927 aa14.29□□□□□ -0.12
SMC4-202ENST00000357388 NCOA1Q15788 1441 aa14.29□□□□□ -0.12
SMC4-202ENST00000357388 GSDMBQ8TAX9 411 aa14.29□□□□□ -0.12
SMC4-202ENST00000357388 FAM71BQ8TC56 605 aa14.29□□□□□ -0.12
SMC4-202ENST00000357388 STAG1Q8WVM7 1258 aa14.29□□□□□ -0.12
SMC4-202ENST00000357388 TFCP2L1Q9NZI6 479 aa14.29□□□□□ -0.12
SMC4-202ENST00000357388 PTPDC1A2A3K4 754 aa14.29□□□□□ -0.12
SMC4-202ENST00000357388 EVI5O60447 810 aa14.29□□□□□ -0.12
SMC4-202ENST00000357388 SLC9C1Q4G0N8 1177 aa14.29□□□□□ -0.12
SMC4-202ENST00000357388 SND1Q7KZF4 910 aaKnown RBP eCLIP14.29□□□□□ -0.126e-9■■■■■ 32.8
SMC4-202ENST00000357388 EIF2AQ9BY44 585 aaKnown RBP14.29□□□□□ -0.12
SMC4-202ENST00000357388 FRMD4BQ9Y2L6 1034 aa14.29□□□□□ -0.12
SMC4-202ENST00000357388 FAM135AQ9P2D6 1515 aa14.29□□□□□ -0.12
SMC4-202ENST00000357388 PFDN1O60925 122 aa14.29□□□□□ -0.12
SMC4-202ENST00000357388 COG7P83436 770 aa14.29□□□□□ -0.12
SMC4-202ENST00000357388 AGTPBP1Q9UPW5 1226 aa14.29□□□□□ -0.12
SMC4-202ENST00000357388 SUPT6HQ7KZ85 1726 aaKnown RBP14.28□□□□□ -0.12
SMC4-202ENST00000357388 CHRNA2Q15822 529 aa14.28□□□□□ -0.12
SMC4-202ENST00000357388 TRIM35Q9UPQ4 493 aa14.28□□□□□ -0.12
SMC4-202ENST00000357388 NOD1Q9Y239 953 aa14.28□□□□□ -0.12
SMC4-202ENST00000357388 SV2BQ7L1I2 683 aa14.28□□□□□ -0.12
SMC4-202ENST00000357388 HOOK2Q96ED9 719 aa14.28□□□□□ -0.12
SMC4-202ENST00000357388 ZNF500O60304 480 aaPredicted RBP14.28□□□□□ -0.12
SMC4-202ENST00000357388 OPHN1O60890 802 aa14.28□□□□□ -0.12
SMC4-202ENST00000357388 GNGT1P63211 74 aa14.28□□□□□ -0.12
SMC4-202ENST00000357388 TTC6Q86TZ1 520 aa14.28□□□□□ -0.12
SMC4-202ENST00000357388 LLPHQ9BRT6 129 aaKnown RBP14.28□□□□□ -0.12
SMC4-202ENST00000357388 PRPF31Q8WWY3 499 aaKnown RBP14.28□□□□□ -0.12
SMC4-202ENST00000357388 KIAA0586Q9BVV6 1533 aa14.28□□□□□ -0.12
SMC4-202ENST00000357388 NLRP12P59046 1061 aa14.28□□□□□ -0.12
SMC4-202ENST00000357388 ATP8B2P98198 1209 aa14.28□□□□□ -0.12
SMC4-202ENST00000357388 EFCAB13Q8IY85 973 aa14.28□□□□□ -0.12
SMC4-202ENST00000357388 PPP1R9AQ9ULJ8 1098 aa14.28□□□□□ -0.12
SMC4-202ENST00000357388 VGLL3A8MV65 326 aa14.27□□□□□ -0.12
SMC4-202ENST00000357388 BACH1O14867 736 aa14.27□□□□□ -0.12
SMC4-202ENST00000357388 RFX1P22670 979 aa14.27□□□□□ -0.12
SMC4-202ENST00000357388 RAPGEF1Q13905 1077 aa14.27□□□□□ -0.12
SMC4-202ENST00000357388 DHX32Q7L7V1 743 aaKnown RBP14.27□□□□□ -0.12
SMC4-202ENST00000357388 STX2P32856 288 aa14.27□□□□□ -0.12
SMC4-202ENST00000357388 BEGAINQ9BUH8 593 aa14.27□□□□□ -0.12
SMC4-202ENST00000357388 BCL2L12Q9HB09 334 aa14.27□□□□□ -0.12
SMC4-202ENST00000357388 CTNND2Q9UQB3 1225 aa14.27□□□□□ -0.12
SMC4-202ENST00000357388 ACEP12821 1306 aa14.27□□□□□ -0.13
SMC4-202ENST00000357388 ANKRD36BQ8N2N9 1353 aa14.27□□□□□ -0.13
SMC4-202ENST00000357388 PSMD6Q15008 389 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms