RNA–Protein interactions for RNA: ENST00000356948.10

PTBP1-203, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTBP1, Length 3,598 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-203ENST00000356948 SUSD4Q5VX71 490 aa17.63■□□□□ 0.41
PTBP1-203ENST00000356948 METTL16Q86W50 562 aaKnown RBP17.63■□□□□ 0.41
PTBP1-203ENST00000356948 SDR42E1Q8WUS8 393 aa17.63■□□□□ 0.41
PTBP1-203ENST00000356948 GTPBP4Q9BZE4 634 aaKnown RBP17.63■□□□□ 0.41
PTBP1-203ENST00000356948 SHANK3Q9BYB0 1731 aa17.63■□□□□ 0.41
PTBP1-203ENST00000356948 ZMYM6O95789 1325 aa17.63■□□□□ 0.41
PTBP1-203ENST00000356948 TRIM28Q13263 835 aaKnown RBP17.63■□□□□ 0.41
PTBP1-203ENST00000356948 CERS3Q8IU89 383 aa17.63■□□□□ 0.41
PTBP1-203ENST00000356948 IFNL3Q8IZI9 196 aa17.63■□□□□ 0.41
PTBP1-203ENST00000356948 SHISA4Q96DD7 197 aa17.63■□□□□ 0.41
PTBP1-203ENST00000356948 GOLGA8AA7E2F4 631 aa17.62■□□□□ 0.41
PTBP1-203ENST00000356948 ZBTB43O43298 467 aa17.62■□□□□ 0.41
PTBP1-203ENST00000356948 PRR29P0C7W0 189 aa17.62■□□□□ 0.41
PTBP1-203ENST00000356948 TOB1P50616 345 aaPredicted RBP17.62■□□□□ 0.41
PTBP1-203ENST00000356948 ZRSR1Q15695 479 aaKnown RBP17.62■□□□□ 0.41
PTBP1-203ENST00000356948 DZIP3Q86Y13 1208 aaKnown RBP17.62■□□□□ 0.41
PTBP1-203ENST00000356948 TRMT44Q8IYL2 757 aaKnown RBP17.62■□□□□ 0.41
PTBP1-203ENST00000356948 IFIT3O14879 490 aaKnown RBP17.62■□□□□ 0.41
PTBP1-203ENST00000356948 YEATS4O95619 227 aa17.62■□□□□ 0.41
PTBP1-203ENST00000356948 ELF2Q15723 593 aa17.62■□□□□ 0.41
PTBP1-203ENST00000356948 SLC4A8Q2Y0W8 1093 aa17.62■□□□□ 0.41
PTBP1-203ENST00000356948 NOM1Q5C9Z4 860 aaKnown RBP17.62■□□□□ 0.41
PTBP1-203ENST00000356948 SYT10Q6XYQ8 523 aa17.62■□□□□ 0.41
PTBP1-203ENST00000356948 FAM177A1Q8N128 213 aaPredicted RBP17.62■□□□□ 0.41
PTBP1-203ENST00000356948 FBXL16Q8N461 479 aa17.62■□□□□ 0.41
PTBP1-203ENST00000356948 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.62■□□□□ 0.415e-9■□□□□ 10.2
PTBP1-203ENST00000356948 AEBP2Q6ZN18 517 aaPredicted RBP17.61■□□□□ 0.41
PTBP1-203ENST00000356948 SLC51AQ86UW1 340 aa17.61■□□□□ 0.41
PTBP1-203ENST00000356948 PLA2G12BQ9BX93 195 aa17.61■□□□□ 0.41
PTBP1-203ENST00000356948 FANCLQ9NW38 375 aa17.61■□□□□ 0.41
PTBP1-203ENST00000356948 DHX16O60231 1041 aaKnown RBP17.61■□□□□ 0.41
PTBP1-203ENST00000356948 KIF20AO95235 890 aa17.61■□□□□ 0.41
PTBP1-203ENST00000356948 CMA1P23946 247 aa17.61■□□□□ 0.41
PTBP1-203ENST00000356948 FANCCQ00597 558 aa17.61■□□□□ 0.41
PTBP1-203ENST00000356948 SPATA5Q8NB90 893 aa17.61■□□□□ 0.41
PTBP1-203ENST00000356948 ST7Q9NRC1 585 aa17.61■□□□□ 0.41
PTBP1-203ENST00000356948 BAZ2BQ9UIF8 2168 aaKnown RBP17.61■□□□□ 0.41
PTBP1-203ENST00000356948 SOS2Q07890 1332 aaPredicted RBP17.61■□□□□ 0.41
PTBP1-203ENST00000356948 IARSP41252 1262 aaKnown RBP17.61■□□□□ 0.41
PTBP1-203ENST00000356948 NLRP12P59046 1061 aa17.61■□□□□ 0.41
PTBP1-203ENST00000356948 NUP133Q8WUM0 1156 aa17.61■□□□□ 0.41
PTBP1-203ENST00000356948 PCDHA5Q9Y5H7 936 aa17.61■□□□□ 0.41
PTBP1-203ENST00000356948 GSG1L2A8MUP6 293 aa17.6■□□□□ 0.41
PTBP1-203ENST00000356948 WNT7AO00755 349 aa17.6■□□□□ 0.41
PTBP1-203ENST00000356948 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.6■□□□□ 0.41
PTBP1-203ENST00000356948 COL4A1P02462 1669 aa17.6■□□□□ 0.41
PTBP1-203ENST00000356948 PRDM1O75626 825 aa17.6■□□□□ 0.41
PTBP1-203ENST00000356948 NAPBQ9H115 298 aa17.6■□□□□ 0.41
PTBP1-203ENST00000356948 KMT5BQ4FZB7 885 aa17.6■□□□□ 0.41
PTBP1-203ENST00000356948 EARS2Q5JPH6 523 aaKnown RBP17.6■□□□□ 0.41
PTBP1-203ENST00000356948 BRAPQ7Z569 592 aa17.6■□□□□ 0.41
PTBP1-203ENST00000356948 PPP1R13BQ96KQ4 1090 aa17.6■□□□□ 0.41
PTBP1-203ENST00000356948 EPC1Q9H2F5 836 aa17.6■□□□□ 0.41
PTBP1-203ENST00000356948 PCDHB6Q9Y5E3 794 aa17.6■□□□□ 0.41
PTBP1-203ENST00000356948 ATL3Q6DD88 541 aa17.59■□□□□ 0.41
PTBP1-203ENST00000356948 NAT10Q9H0A0 1025 aaKnown RBP17.59■□□□□ 0.41
PTBP1-203ENST00000356948 INTS13Q9NVM9 706 aa17.59■□□□□ 0.41
PTBP1-203ENST00000356948 C4AP0C0L4 1744 aa17.59■□□□□ 0.41
PTBP1-203ENST00000356948 C4BP0C0L5 1744 aa17.59■□□□□ 0.41
PTBP1-203ENST00000356948 CAVIN2O95810 425 aa17.59■□□□□ 0.41
PTBP1-203ENST00000356948 CCDC24Q8N4L8 307 aa17.59■□□□□ 0.41
PTBP1-203ENST00000356948 MINDY4BA8MYZ0 360 aa17.58■□□□□ 0.41
PTBP1-203ENST00000356948 HPSEQ9Y251 543 aa17.58■□□□□ 0.41
PTBP1-203ENST00000356948 SLC12A7Q9Y666 1083 aa17.58■□□□□ 0.41
PTBP1-203ENST00000356948 FMR1Q06787 632 aaKnown RBP eCLIP17.58■□□□□ 0.42e-7■■□□□ 12.6
PTBP1-203ENST00000356948 PAXIP1Q6ZW49 1069 aaPredicted RBP17.58■□□□□ 0.4
PTBP1-203ENST00000356948 KLHL34Q8N239 644 aa17.58■□□□□ 0.4
PTBP1-203ENST00000356948 ABCF2Q9UG63 623 aa17.58■□□□□ 0.4
PTBP1-203ENST00000356948 JAG2Q9Y219 1238 aa17.58■□□□□ 0.4
PTBP1-203ENST00000356948 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.58■□□□□ 0.4
PTBP1-203ENST00000356948 ADAMTS3O15072 1205 aa17.58■□□□□ 0.4
PTBP1-203ENST00000356948 UBE3CQ15386 1083 aa17.58■□□□□ 0.4
PTBP1-203ENST00000356948 MED15Q96RN5 788 aa17.58■□□□□ 0.4
PTBP1-203ENST00000356948 SLC4A4Q9Y6R1 1079 aa17.58■□□□□ 0.4
PTBP1-203ENST00000356948 EP400Q96L91 3159 aa17.57■□□□□ 0.4
PTBP1-203ENST00000356948 PARP4Q9UKK3 1724 aaKnown RBP17.57■□□□□ 0.4
PTBP1-203ENST00000356948 PDE8AO60658 829 aa17.57■□□□□ 0.4
PTBP1-203ENST00000356948 FGFR2P21802 821 aa17.57■□□□□ 0.4
PTBP1-203ENST00000356948 ERCC6LQ2NKX8 1250 aa17.57■□□□□ 0.4
PTBP1-203ENST00000356948 CFAP100Q494V2 611 aa17.57■□□□□ 0.4
PTBP1-203ENST00000356948 C3orf67Q6ZVT6 689 aa17.57■□□□□ 0.4
PTBP1-203ENST00000356948 SERPINC1P01008 464 aa17.57■□□□□ 0.4
PTBP1-203ENST00000356948 LRRFIP1Q32MZ4 808 aaKnown RBP17.57■□□□□ 0.4
PTBP1-203ENST00000356948 ZFP91Q96JP5 570 aaPredicted RBP17.57■□□□□ 0.4
PTBP1-203ENST00000356948 KCNH3Q9ULD8 1083 aa17.57■□□□□ 0.4
PTBP1-203ENST00000356948 TDO2P48775 406 aa17.56■□□□□ 0.4
PTBP1-203ENST00000356948 FBXO38Q6PIJ6 1188 aa17.56■□□□□ 0.4
PTBP1-203ENST00000356948 DIS3L2Q8IYB7 885 aaKnown RBP17.56■□□□□ 0.4
PTBP1-203ENST00000356948 STAMQ92783 540 aa17.56■□□□□ 0.4
PTBP1-203ENST00000356948 OSBPL5Q9H0X9 879 aaPredicted RBP17.56■□□□□ 0.4
PTBP1-203ENST00000356948 PAPPAQ13219 1627 aa17.56■□□□□ 0.4
PTBP1-203ENST00000356948 POLR2DO15514 142 aaKnown RBP17.56■□□□□ 0.4
PTBP1-203ENST00000356948 ARID4AP29374 1257 aaPredicted RBP17.56■□□□□ 0.4
PTBP1-203ENST00000356948 GYG1P46976 350 aa17.56■□□□□ 0.4
PTBP1-203ENST00000356948 UBASH3AP57075 661 aa17.56■□□□□ 0.4
PTBP1-203ENST00000356948 PUM3Q15397 648 aaKnown RBP17.56■□□□□ 0.4
PTBP1-203ENST00000356948 UTP14CQ5TAP6 766 aaKnown RBP17.56■□□□□ 0.4
PTBP1-203ENST00000356948 CNNM3Q8NE01 707 aa17.56■□□□□ 0.4
PTBP1-203ENST00000356948 UTP14AQ9BVJ6 771 aaKnown RBP17.56■□□□□ 0.4
PTBP1-203ENST00000356948 PAXBP1Q9Y5B6 917 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms