RNA–Protein interactions for RNA: ENST00000356005.8

FN1-204, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-204ENST00000356005 USP40Q9NVE5 1235 aa12.67□□□□□ -0.38
FN1-204ENST00000356005 FAM135BQ49AJ0 1406 aa12.67□□□□□ -0.38
FN1-204ENST00000356005 PALM3A6NDB9 673 aaPredicted RBP12.67□□□□□ -0.38
FN1-204ENST00000356005 CCT6AP40227 531 aaKnown RBP12.67□□□□□ -0.38
FN1-204ENST00000356005 GTF2IP78347 998 aa12.67□□□□□ -0.38
FN1-204ENST00000356005 RUFY3Q7L099 469 aa12.67□□□□□ -0.38
FN1-204ENST00000356005 FCHSD1Q86WN1 690 aa12.67□□□□□ -0.38
FN1-204ENST00000356005 LLPHQ9BRT6 129 aaKnown RBP12.67□□□□□ -0.38
FN1-204ENST00000356005 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.67□□□□□ -0.38
FN1-204ENST00000356005 PPEF1O14829 653 aaPredicted RBP12.67□□□□□ -0.38
FN1-204ENST00000356005 IQCGQ9H095 443 aaKnown RBP12.67□□□□□ -0.38
FN1-204ENST00000356005 INSRP06213 1382 aa12.66□□□□□ -0.38
FN1-204ENST00000356005 BBOX1O75936 387 aa12.66□□□□□ -0.38
FN1-204ENST00000356005 CCDC184Q52MB2 194 aa12.66□□□□□ -0.38
FN1-204ENST00000356005 ELMSAN1Q6PJG2 1045 aa12.66□□□□□ -0.38
FN1-204ENST00000356005 CCDC125Q86Z20 511 aa12.66□□□□□ -0.38
FN1-204ENST00000356005 KIFC2Q96AC6 838 aa12.66□□□□□ -0.38
FN1-204ENST00000356005 DCTPP1Q9H773 170 aa12.66□□□□□ -0.38
FN1-204ENST00000356005 ZNF165P49910 485 aa12.66□□□□□ -0.38
FN1-204ENST00000356005 RAB11FIP4Q86YS3 637 aa12.66□□□□□ -0.38
FN1-204ENST00000356005 RAB3IL1Q8TBN0 382 aa12.66□□□□□ -0.38
FN1-204ENST00000356005 CSRNP2Q9H175 543 aa12.66□□□□□ -0.38
FN1-204ENST00000356005 KIF24Q5T7B8 1368 aa12.66□□□□□ -0.38
FN1-204ENST00000356005 BIN1O00499 593 aa12.66□□□□□ -0.38
FN1-204ENST00000356005 SPTLC2O15270 562 aa12.66□□□□□ -0.38
FN1-204ENST00000356005 IL13P35225 146 aa12.66□□□□□ -0.38
FN1-204ENST00000356005 ARL1P40616 181 aaPredicted RBP12.66□□□□□ -0.38
FN1-204ENST00000356005 TSGA10Q9BZW7 698 aa12.66□□□□□ -0.38
FN1-204ENST00000356005 EEF2P13639 858 aaKnown RBP12.66□□□□□ -0.38
FN1-204ENST00000356005 MAP3K4Q9Y6R4 1608 aa12.66□□□□□ -0.38
FN1-204ENST00000356005 XDHP47989 1333 aa12.66□□□□□ -0.38
FN1-204ENST00000356005 TUBB4BP68371 445 aa12.66□□□□□ -0.38
FN1-204ENST00000356005 RTKN2Q8IZC4 609 aa12.66□□□□□ -0.38
FN1-204ENST00000356005 CPXCR1Q8N123 301 aa12.66□□□□□ -0.38
FN1-204ENST00000356005 NSMCE1Q8WV22 266 aa12.66□□□□□ -0.38
FN1-204ENST00000356005 MRPL11Q9Y3B7 192 aaKnown RBP12.66□□□□□ -0.38
FN1-204ENST00000356005 STK10O94804 968 aaKnown RBP12.66□□□□□ -0.38
FN1-204ENST00000356005 DDX17Q92841 729 aaKnown RBP12.66□□□□□ -0.38
FN1-204ENST00000356005 SWAP70Q9UH65 585 aa12.66□□□□□ -0.38
FN1-204ENST00000356005 PNMA3Q9UL41 463 aa12.66□□□□□ -0.38
FN1-204ENST00000356005 YWHAEP62258 255 aaKnown RBP12.65□□□□□ -0.38
FN1-204ENST00000356005 ZYXQ15942 572 aaKnown RBP12.65□□□□□ -0.38
FN1-204ENST00000356005 KRT26Q7Z3Y9 468 aa12.65□□□□□ -0.38
FN1-204ENST00000356005 PHKG2P15735 406 aa12.65□□□□□ -0.38
FN1-204ENST00000356005 RILPL1Q5EBL4 403 aa12.65□□□□□ -0.38
FN1-204ENST00000356005 GSTA5Q7RTV2 222 aa12.65□□□□□ -0.38
FN1-204ENST00000356005 ABT1Q9ULW3 272 aaKnown RBP12.65□□□□□ -0.38
FN1-204ENST00000356005 PZPP20742 1482 aa12.65□□□□□ -0.38
FN1-204ENST00000356005 GPAA1O43292 621 aa12.65□□□□□ -0.38
FN1-204ENST00000356005 IL6STP40189 918 aaPredicted RBP12.65□□□□□ -0.38
FN1-204ENST00000356005 KRT83P78385 493 aa12.65□□□□□ -0.38
FN1-204ENST00000356005 VWA3BQ502W6 1294 aa12.65□□□□□ -0.38
FN1-204ENST00000356005 TMC6Q7Z403 805 aa12.65□□□□□ -0.38
FN1-204ENST00000356005 CPLX3Q8WVH0 158 aa12.65□□□□□ -0.38
FN1-204ENST00000356005 BIRC3Q13489 604 aa12.65□□□□□ -0.38
FN1-204ENST00000356005 STMN4Q9H169 189 aaPredicted RBP12.65□□□□□ -0.38
FN1-204ENST00000356005 H0YCG3 227 aa12.65□□□□□ -0.38
FN1-204ENST00000356005 LETM2Q2VYF4 491 aa12.65□□□□□ -0.38
FN1-204ENST00000356005 TMCO3Q6UWJ1 677 aa12.65□□□□□ -0.38
FN1-204ENST00000356005 ADCY7P51828 1080 aa12.65□□□□□ -0.39
FN1-204ENST00000356005 PRKG1Q13976 671 aa12.65□□□□□ -0.39
FN1-204ENST00000356005 RSPH3Q86UC2 560 aa12.65□□□□□ -0.39
FN1-204ENST00000356005 LRRC2Q9BYS8 371 aa12.65□□□□□ -0.39
FN1-204ENST00000356005 DNM3Q9UQ16 869 aa12.65□□□□□ -0.39
FN1-204ENST00000356005 KRT25Q7Z3Z0 450 aa12.64□□□□□ -0.39
FN1-204ENST00000356005 RNF34Q969K3 372 aa12.64□□□□□ -0.39
FN1-204ENST00000356005 WDR17Q8IZU2 1322 aa12.64□□□□□ -0.39
FN1-204ENST00000356005 CNGA1P29973 690 aa12.64□□□□□ -0.39
FN1-204ENST00000356005 CCDC77Q9BR77 488 aa12.64□□□□□ -0.39
FN1-204ENST00000356005 MAP3K15Q6ZN16 1313 aa12.64□□□□□ -0.39
FN1-204ENST00000356005 DNA2P51530 1060 aa12.64□□□□□ -0.39
FN1-204ENST00000356005 CALCRLQ16602 461 aa12.64□□□□□ -0.39
FN1-204ENST00000356005 CERKLQ49MI3 558 aaPredicted RBP12.64□□□□□ -0.39
FN1-204ENST00000356005 EXOC8Q8IYI6 725 aa12.64□□□□□ -0.39
FN1-204ENST00000356005 TGFBRAP1Q8WUH2 860 aa12.64□□□□□ -0.39
FN1-204ENST00000356005 FAM193BQ96PV7 902 aaPredicted RBP12.64□□□□□ -0.39
FN1-204ENST00000356005 KDM3AQ9Y4C1 1321 aa12.64□□□□□ -0.39
FN1-204ENST00000356005 IREB2P48200 963 aaKnown RBP12.64□□□□□ -0.39
FN1-204ENST00000356005 FAM47CQ5HY64 1035 aa12.64□□□□□ -0.39
FN1-204ENST00000356005 GINS2Q9Y248 185 aa12.64□□□□□ -0.39
FN1-204ENST00000356005 ERVK-7P63135 1459 aa12.64□□□□□ -0.39
FN1-204ENST00000356005 ARAP3Q8WWN8 1544 aa12.64□□□□□ -0.39
FN1-204ENST00000356005 SHTN1A0MZ66 631 aa12.64□□□□□ -0.39
FN1-204ENST00000356005 BCCIPQ9P287 314 aaKnown RBP eCLIP12.64□□□□□ -0.39
FN1-204ENST00000356005 KIAA0232Q92628 1395 aa12.64□□□□□ -0.39
FN1-204ENST00000356005 MYOM2P54296 1465 aa12.64□□□□□ -0.39
FN1-204ENST00000356005 CCDC93Q567U6 631 aa12.64□□□□□ -0.39
FN1-204ENST00000356005 MAP2P11137 1827 aaKnown RBP12.64□□□□□ -0.39
FN1-204ENST00000356005 A0A1W2PRG0 241 aa12.63□□□□□ -0.39
FN1-204ENST00000356005 NDC80O14777 642 aa12.63□□□□□ -0.39
FN1-204ENST00000356005 USP14P54578 494 aa12.63□□□□□ -0.39
FN1-204ENST00000356005 SEMA3EO15041 775 aa12.63□□□□□ -0.39
FN1-204ENST00000356005 KRT5P13647 590 aa12.63□□□□□ -0.39
FN1-204ENST00000356005 C20orf194Q5TEA3 1177 aa12.63□□□□□ -0.39
FN1-204ENST00000356005 DPP9Q86TI2 863 aa12.63□□□□□ -0.39
FN1-204ENST00000356005 SBNO2Q9Y2G9 1366 aa12.63□□□□□ -0.39
FN1-204ENST00000356005 TIMM10P62072 90 aa12.63□□□□□ -0.39
FN1-204ENST00000356005 DHX58Q96C10 678 aa12.63□□□□□ -0.39
FN1-204ENST00000356005 ARMT1Q9H993 441 aa12.63□□□□□ -0.39
FN1-204ENST00000356005 MLXIPQ9HAP2 919 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms