RNA–Protein interactions for RNA: ENST00000354757.4

PCDHB11-201, Transcript of protocadherin beta 11, humanhuman

APPRIS P1 BASIC

Gene PCDHB11, Length 4,198 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-201ENST00000354757 ZBTB7AO95365 584 aa14.15□□□□□ -0.14
PCDHB11-201ENST00000354757 CYP2E1P05181 493 aaPredicted RBP14.15□□□□□ -0.14
PCDHB11-201ENST00000354757 LETM2Q2VYF4 491 aa14.15□□□□□ -0.14
PCDHB11-201ENST00000354757 FCHSD1Q86WN1 690 aa14.15□□□□□ -0.14
PCDHB11-201ENST00000354757 LINC00116Q8NCU8 138 aa14.15□□□□□ -0.14
PCDHB11-201ENST00000354757 TM6SF1Q9BZW5 370 aa14.15□□□□□ -0.14
PCDHB11-201ENST00000354757 RAD17O75943 681 aa14.15□□□□□ -0.14
PCDHB11-201ENST00000354757 ADCY5O95622 1261 aa14.15□□□□□ -0.14
PCDHB11-201ENST00000354757 CLEC4GQ6UXB4 293 aa14.15□□□□□ -0.14
PCDHB11-201ENST00000354757 CLIP2Q9UDT6 1046 aa14.15□□□□□ -0.14
PCDHB11-201ENST00000354757 MINPP1Q9UNW1 487 aa14.15□□□□□ -0.14
PCDHB11-201ENST00000354757 XDHP47989 1333 aa14.15□□□□□ -0.14
PCDHB11-201ENST00000354757 VWA3AA6NCI4 1184 aa14.15□□□□□ -0.14
PCDHB11-201ENST00000354757 PPEF1O14829 653 aaPredicted RBP14.15□□□□□ -0.14
PCDHB11-201ENST00000354757 PARP1P09874 1014 aaKnown RBP14.15□□□□□ -0.14
PCDHB11-201ENST00000354757 ADD2P35612 726 aa14.15□□□□□ -0.14
PCDHB11-201ENST00000354757 KRT40Q6A162 431 aa14.15□□□□□ -0.14
PCDHB11-201ENST00000354757 PIK3AP1Q6ZUJ8 805 aa14.15□□□□□ -0.14
PCDHB11-201ENST00000354757 ZNF654Q8IZM8 581 aa14.15□□□□□ -0.14
PCDHB11-201ENST00000354757 GPR108Q9NPR9 543 aa14.15□□□□□ -0.14
PCDHB11-201ENST00000354757 PKD2L1Q9P0L9 805 aa14.15□□□□□ -0.14
PCDHB11-201ENST00000354757 RTL9Q8NET4 1388 aa14.14□□□□□ -0.15
PCDHB11-201ENST00000354757 TCP10L2B9ZVM9 353 aa14.14□□□□□ -0.15
PCDHB11-201ENST00000354757 ATP2B4P23634 1241 aa14.14□□□□□ -0.15
PCDHB11-201ENST00000354757 SP4Q02446 784 aa14.14□□□□□ -0.15
PCDHB11-201ENST00000354757 VPS72Q15906 364 aa14.14□□□□□ -0.15
PCDHB11-201ENST00000354757 CACNB3P54284 484 aa14.14□□□□□ -0.15
PCDHB11-201ENST00000354757 UBE3CQ15386 1083 aa14.14□□□□□ -0.15
PCDHB11-201ENST00000354757 JAKMIP3Q5VZ66 844 aa14.14□□□□□ -0.15
PCDHB11-201ENST00000354757 GTF3C6Q969F1 213 aa14.14□□□□□ -0.15
PCDHB11-201ENST00000354757 SMARCE1Q969G3 411 aa14.14□□□□□ -0.15
PCDHB11-201ENST00000354757 TEKT1Q969V4 418 aa14.14□□□□□ -0.15
PCDHB11-201ENST00000354757 RRP36Q96EU6 259 aaKnown RBP14.14□□□□□ -0.15
PCDHB11-201ENST00000354757 ARHGAP23Q9P227 1491 aa14.14□□□□□ -0.15
PCDHB11-201ENST00000354757 SPDYE4A6NLX3 237 aa14.14□□□□□ -0.15
PCDHB11-201ENST00000354757 LMOD1P29536 600 aaPredicted RBP14.14□□□□□ -0.15
PCDHB11-201ENST00000354757 LRRC47Q8N1G4 583 aaKnown RBP14.14□□□□□ -0.15
PCDHB11-201ENST00000354757 RAB34Q9BZG1 259 aa14.14□□□□□ -0.15
PCDHB11-201ENST00000354757 CALM1P0DP23 149 aa14.13□□□□□ -0.15
PCDHB11-201ENST00000354757 CALM2P0DP24 149 aa14.13□□□□□ -0.15
PCDHB11-201ENST00000354757 CALM3P0DP25 149 aa14.13□□□□□ -0.15
PCDHB11-201ENST00000354757 TNNT3P45378 269 aaPredicted RBP14.13□□□□□ -0.15
PCDHB11-201ENST00000354757 STX17P56962 302 aa14.13□□□□□ -0.15
PCDHB11-201ENST00000354757 LRSAM1Q6UWE0 723 aa14.13□□□□□ -0.15
PCDHB11-201ENST00000354757 CPXCR1Q8N123 301 aa14.13□□□□□ -0.15
PCDHB11-201ENST00000354757 STAMQ92783 540 aa14.13□□□□□ -0.15
PCDHB11-201ENST00000354757 IGSF3O75054 1194 aa14.13□□□□□ -0.15
PCDHB11-201ENST00000354757 RBM6P78332 1123 aaKnown RBP14.13□□□□□ -0.15
PCDHB11-201ENST00000354757 DLGAP5Q15398 846 aa14.13□□□□□ -0.15
PCDHB11-201ENST00000354757 FNBP4Q8N3X1 1017 aaPredicted RBP14.13□□□□□ -0.15
PCDHB11-201ENST00000354757 CCDC148Q8NFR7 591 aa14.13□□□□□ -0.15
PCDHB11-201ENST00000354757 SPATA31A5Q5VU36 1347 aa14.13□□□□□ -0.15
PCDHB11-201ENST00000354757 SPATA31A7Q8IWB4 1347 aa14.13□□□□□ -0.15
PCDHB11-201ENST00000354757 C21orf2O43822 256 aa14.13□□□□□ -0.15
PCDHB11-201ENST00000354757 USP17L8P0C7I0 530 aa14.13□□□□□ -0.15
PCDHB11-201ENST00000354757 KRT2P35908 639 aa14.13□□□□□ -0.15
PCDHB11-201ENST00000354757 ATG9AQ7Z3C6 839 aa14.13□□□□□ -0.15
PCDHB11-201ENST00000354757 NIM1KQ8IY84 436 aa14.13□□□□□ -0.15
PCDHB11-201ENST00000354757 TRMT1Q9NXH9 659 aaKnown RBP14.13□□□□□ -0.15
PCDHB11-201ENST00000354757 SMTNL1A8MU46 457 aa14.12□□□□□ -0.15
PCDHB11-201ENST00000354757 SCRN1Q12765 414 aa14.12□□□□□ -0.15
PCDHB11-201ENST00000354757 ZFYVE27Q5T4F4 411 aa14.12□□□□□ -0.15
PCDHB11-201ENST00000354757 FLAD1Q8NFF5 587 aa14.12□□□□□ -0.15
PCDHB11-201ENST00000354757 SMARCC2Q8TAQ2 1214 aa14.12□□□□□ -0.15
PCDHB11-201ENST00000354757 TBC1D22AQ8WUA7 517 aa14.12□□□□□ -0.15
PCDHB11-201ENST00000354757 CCDC178Q5BJE1 867 aa14.12□□□□□ -0.15
PCDHB11-201ENST00000354757 DYNLL2Q96FJ2 89 aa14.12□□□□□ -0.15
PCDHB11-201ENST00000354757 IL25Q9H293 177 aa14.12□□□□□ -0.15
PCDHB11-201ENST00000354757 GJB4Q9NTQ9 266 aa14.12□□□□□ -0.15
PCDHB11-201ENST00000354757 SLIT1O75093 1534 aa14.12□□□□□ -0.15
PCDHB11-201ENST00000354757 SLC1A4P43007 532 aa14.12□□□□□ -0.15
PCDHB11-201ENST00000354757 MNS1Q8NEH6 495 aa14.12□□□□□ -0.15
PCDHB11-201ENST00000354757 KAZALD1Q96I82 304 aa14.12□□□□□ -0.15
PCDHB11-201ENST00000354757 USH1GQ495M9 461 aa14.12□□□□□ -0.15
PCDHB11-201ENST00000354757 CALML4Q96GE6 196 aa14.12□□□□□ -0.15
PCDHB11-201ENST00000354757 DEF6Q9H4E7 631 aa14.12□□□□□ -0.15
PCDHB11-201ENST00000354757 C6orf50Q9HD87 102 aa14.12□□□□□ -0.15
PCDHB11-201ENST00000354757 BSDC1Q9NW68 430 aaPredicted RBP14.12□□□□□ -0.15
PCDHB11-201ENST00000354757 COL3A1P02461 1466 aaPredicted RBP14.12□□□□□ -0.15
PCDHB11-201ENST00000354757 OVOS2A0A0G2JMS6 1433 aa14.11□□□□□ -0.15
PCDHB11-201ENST00000354757 CTAGE5O15320 804 aa14.11□□□□□ -0.15
PCDHB11-201ENST00000354757 BRD1O95696 1058 aa14.11□□□□□ -0.15
PCDHB11-201ENST00000354757 STX1AQ16623 288 aa14.11□□□□□ -0.15
PCDHB11-201ENST00000354757 LUZP1Q86V48 1076 aa14.11□□□□□ -0.15
PCDHB11-201ENST00000354757 AOPEPQ8N6M6 819 aa14.11□□□□□ -0.15
PCDHB11-201ENST00000354757 PDIA3P30101 505 aaKnown RBP14.11□□□□□ -0.15
PCDHB11-201ENST00000354757 STAT6P42226 847 aa14.11□□□□□ -0.15
PCDHB11-201ENST00000354757 GRAPQ13588 217 aa14.11□□□□□ -0.15
PCDHB11-201ENST00000354757 CT47A1Q5JQC4 288 aaPredicted RBP14.11□□□□□ -0.15
PCDHB11-201ENST00000354757 GRAPLQ8TC17 118 aaPredicted RBP14.11□□□□□ -0.15
PCDHB11-201ENST00000354757 AIFM3Q96NN9 605 aa14.11□□□□□ -0.15
PCDHB11-201ENST00000354757 TMX1Q9H3N1 280 aa14.11□□□□□ -0.15
PCDHB11-201ENST00000354757 FRMPD2Q68DX3 1309 aaPredicted RBP14.11□□□□□ -0.15
PCDHB11-201ENST00000354757 POLR1AO95602 1720 aaPredicted RBP14.11□□□□□ -0.15
PCDHB11-201ENST00000354757 DEXIO95424 95 aa14.11□□□□□ -0.15
PCDHB11-201ENST00000354757 MECOMQ03112 1051 aa14.11□□□□□ -0.15
PCDHB11-201ENST00000354757 NECTIN1Q15223 517 aa14.11□□□□□ -0.15
PCDHB11-201ENST00000354757 NOM1Q5C9Z4 860 aaKnown RBP14.11□□□□□ -0.15
PCDHB11-201ENST00000354757 FTOQ9C0B1 505 aaKnown RBP eCLIP14.11□□□□□ -0.15
PCDHB11-201ENST00000354757 MATR3P43243 847 aaKnown RBP eCLIP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms