RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 FERMT3Q86UX7 667 aa8.11□□□□□ -1.11
TRIM55-203ENST00000350034 SP8Q8IXZ3 490 aa8.11□□□□□ -1.11
TRIM55-203ENST00000350034 DNAJC5GQ8N7S2 189 aa8.11□□□□□ -1.11
TRIM55-203ENST00000350034 SDR42E1Q8WUS8 393 aa8.11□□□□□ -1.11
TRIM55-203ENST00000350034 SYAP1Q96A49 352 aaPredicted RBP8.11□□□□□ -1.11
TRIM55-203ENST00000350034 SENP2Q9HC62 589 aa8.11□□□□□ -1.11
TRIM55-203ENST00000350034 CD209Q9NNX6 404 aa8.11□□□□□ -1.11
TRIM55-203ENST00000350034 MKRN1Q9UHC7 482 aaKnown RBP8.11□□□□□ -1.11
TRIM55-203ENST00000350034 GGA1Q9UJY5 639 aa8.11□□□□□ -1.11
TRIM55-203ENST00000350034 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.11□□□□□ -1.11
TRIM55-203ENST00000350034 LRRC37AA6NMS7 1700 aa8.1□□□□□ -1.11
TRIM55-203ENST00000350034 H3BQV1 296 aa8.1□□□□□ -1.11
TRIM55-203ENST00000350034 IFIT3O14879 490 aaKnown RBP8.1□□□□□ -1.11
TRIM55-203ENST00000350034 ORC4O43929 436 aa8.1□□□□□ -1.11
TRIM55-203ENST00000350034 UFL1O94874 794 aa8.1□□□□□ -1.11
TRIM55-203ENST00000350034 SRGNP10124 158 aa8.1□□□□□ -1.11
TRIM55-203ENST00000350034 NT5C2P49902 561 aa8.1□□□□□ -1.11
TRIM55-203ENST00000350034 SEC23AQ15436 765 aa8.1□□□□□ -1.11
TRIM55-203ENST00000350034 NTRK3Q16288 839 aa8.1□□□□□ -1.11
TRIM55-203ENST00000350034 TMEM67Q5HYA8 995 aa8.1□□□□□ -1.11
TRIM55-203ENST00000350034 FAM173BQ6P4H8 233 aa8.1□□□□□ -1.11
TRIM55-203ENST00000350034 CTR9Q6PD62 1173 aa8.1□□□□□ -1.11
TRIM55-203ENST00000350034 LRSAM1Q6UWE0 723 aa8.1□□□□□ -1.11
TRIM55-203ENST00000350034 TMTC2Q8N394 836 aa8.1□□□□□ -1.11
TRIM55-203ENST00000350034 TBC1D16Q8TBP0 767 aa8.1□□□□□ -1.11
TRIM55-203ENST00000350034 LEO1Q8WVC0 666 aaPredicted RBP8.1□□□□□ -1.11
TRIM55-203ENST00000350034 CRNKL1Q9BZJ0 848 aaKnown RBP8.1□□□□□ -1.11
TRIM55-203ENST00000350034 SCAND2PQ9GZW5 306 aaPredicted RBP8.1□□□□□ -1.11
TRIM55-203ENST00000350034 SPON1Q9HCB6 807 aa8.1□□□□□ -1.11
TRIM55-203ENST00000350034 DCP1AQ9NPI6 582 aaPredicted RBP8.1□□□□□ -1.11
TRIM55-203ENST00000350034 ATP8A2Q9NTI2 1148 aa8.1□□□□□ -1.11
TRIM55-203ENST00000350034 ORC3Q9UBD5 711 aaPredicted RBP8.1□□□□□ -1.11
TRIM55-203ENST00000350034 POLLQ9UGP5 575 aa8.1□□□□□ -1.11
TRIM55-203ENST00000350034 ATP6V0A2Q9Y487 856 aa8.1□□□□□ -1.11
TRIM55-203ENST00000350034 MAST2Q6P0Q8 1798 aa8.1□□□□□ -1.11
TRIM55-203ENST00000350034 DUOX1Q9NRD9 1551 aa8.1□□□□□ -1.11
TRIM55-203ENST00000350034 LTBP1Q14766 1721 aa8.09□□□□□ -1.11
TRIM55-203ENST00000350034 FAM205AQ6ZU69 1335 aa8.09□□□□□ -1.11
TRIM55-203ENST00000350034 STK36Q9NRP7 1315 aa8.09□□□□□ -1.11
TRIM55-203ENST00000350034 SMIM22K7EJ46 135 aa8.09□□□□□ -1.11
TRIM55-203ENST00000350034 ZBTB43O43298 467 aa8.09□□□□□ -1.11
TRIM55-203ENST00000350034 CDKL5O76039 1030 aa8.09□□□□□ -1.11
TRIM55-203ENST00000350034 LDHBP07195 334 aaKnown RBP8.09□□□□□ -1.11
TRIM55-203ENST00000350034 NPR1P16066 1061 aa8.09□□□□□ -1.11
TRIM55-203ENST00000350034 CDC27P30260 824 aa8.09□□□□□ -1.11
TRIM55-203ENST00000350034 METAP2P50579 478 aaKnown RBP eCLIP8.09□□□□□ -1.11
TRIM55-203ENST00000350034 APLP1P51693 650 aa8.09□□□□□ -1.11
TRIM55-203ENST00000350034 GSTO1P78417 241 aa8.09□□□□□ -1.11
TRIM55-203ENST00000350034 GRIK5Q16478 980 aa8.09□□□□□ -1.11
TRIM55-203ENST00000350034 CCDC183Q5T5S1 534 aa8.09□□□□□ -1.11
TRIM55-203ENST00000350034 FBXO18Q8NFZ0 1043 aa8.09□□□□□ -1.11
TRIM55-203ENST00000350034 ESR2Q92731 530 aa8.09□□□□□ -1.11
TRIM55-203ENST00000350034 FAM163AQ96GL9 167 aaPredicted RBP8.09□□□□□ -1.11
TRIM55-203ENST00000350034 PANK2Q9BZ23 570 aa8.09□□□□□ -1.11
TRIM55-203ENST00000350034 RCOR1Q9UKL0 485 aa8.09□□□□□ -1.11
TRIM55-203ENST00000350034 NAP1L2Q9ULW6 460 aaPredicted RBP8.09□□□□□ -1.11
TRIM55-203ENST00000350034 RGPD3A6NKT7 1758 aaPredicted RBP8.09□□□□□ -1.11
TRIM55-203ENST00000350034 RGPD4Q7Z3J3 1758 aa8.09□□□□□ -1.11
TRIM55-203ENST00000350034 SYCE3A1L190 88 aa8.08□□□□□ -1.12
TRIM55-203ENST00000350034 GOLGA8AA7E2F4 631 aa8.08□□□□□ -1.12
TRIM55-203ENST00000350034 MINDY4BA8MYZ0 360 aa8.08□□□□□ -1.12
TRIM55-203ENST00000350034 USP17L12C9JPN9 530 aa8.08□□□□□ -1.12
TRIM55-203ENST00000350034 USP17L21D6R901 530 aa8.08□□□□□ -1.12
TRIM55-203ENST00000350034 CPLX1O14810 134 aa8.08□□□□□ -1.12
TRIM55-203ENST00000350034 PPEF1O14829 653 aaPredicted RBP8.08□□□□□ -1.12
TRIM55-203ENST00000350034 RANBP6O60518 1105 aaKnown RBP8.08□□□□□ -1.12
TRIM55-203ENST00000350034 LETM1O95202 739 aaPredicted RBP8.08□□□□□ -1.12
TRIM55-203ENST00000350034 LDHCP07864 332 aa8.08□□□□□ -1.12
TRIM55-203ENST00000350034 MMP10P09238 476 aa8.08□□□□□ -1.12
TRIM55-203ENST00000350034 IFNAR1P17181 557 aa8.08□□□□□ -1.12
TRIM55-203ENST00000350034 WTAPQ15007 396 aa8.08□□□□□ -1.12
TRIM55-203ENST00000350034 SART3Q15020 963 aaKnown RBP8.08□□□□□ -1.12
TRIM55-203ENST00000350034 PPP2R5BQ15173 497 aa8.08□□□□□ -1.12
TRIM55-203ENST00000350034 CPLX2Q6PUV4 134 aaKnown RBP8.08□□□□□ -1.12
TRIM55-203ENST00000350034 DZIP1Q86YF9 867 aaKnown RBP8.08□□□□□ -1.12
TRIM55-203ENST00000350034 RAB11FIP4Q86YS3 637 aa8.08□□□□□ -1.12
TRIM55-203ENST00000350034 CERS3Q8IU89 383 aa8.08□□□□□ -1.12
TRIM55-203ENST00000350034 PGBD1Q96JS3 809 aa8.08□□□□□ -1.12
TRIM55-203ENST00000350034 C8orf76Q96K31 380 aa8.08□□□□□ -1.12
TRIM55-203ENST00000350034 SPATA32Q96LK8 384 aa8.08□□□□□ -1.12
TRIM55-203ENST00000350034 GPR101Q96P66 508 aaPredicted RBP8.08□□□□□ -1.12
TRIM55-203ENST00000350034 CAMKK2Q96RR4 588 aa8.08□□□□□ -1.12
TRIM55-203ENST00000350034 RTFDC1Q9BY42 306 aaPredicted RBP8.08□□□□□ -1.12
TRIM55-203ENST00000350034 RBSNQ9H1K0 784 aa8.08□□□□□ -1.12
TRIM55-203ENST00000350034 AATFQ9NY61 560 aaKnown RBP eCLIP8.08□□□□□ -1.12
TRIM55-203ENST00000350034 TFIP11Q9UBB9 837 aaKnown RBP8.08□□□□□ -1.12
TRIM55-203ENST00000350034 ARPP21Q9UBL0 812 aaPredicted RBP8.08□□□□□ -1.12
TRIM55-203ENST00000350034 CFAP45Q9UL16 551 aa8.08□□□□□ -1.12
TRIM55-203ENST00000350034 SLC12A7Q9Y666 1083 aa8.08□□□□□ -1.12
TRIM55-203ENST00000350034 TNS1Q9HBL0 1735 aaKnown RBP8.08□□□□□ -1.12
TRIM55-203ENST00000350034 KIAA1551Q9HCM1 1747 aa8.08□□□□□ -1.12
TRIM55-203ENST00000350034 ROBO3Q96MS0 1386 aa8.08□□□□□ -1.12
TRIM55-203ENST00000350034 MROH7-TTC4A0A0A0MT08 1334 aa8.07□□□□□ -1.12
TRIM55-203ENST00000350034 GAKO14976 1311 aa8.07□□□□□ -1.12
TRIM55-203ENST00000350034 ANKRD31Q8N7Z5 1873 aa8.07□□□□□ -1.12
TRIM55-203ENST00000350034 CYP2D7A0A087X1C5 515 aa8.07□□□□□ -1.12
TRIM55-203ENST00000350034 GPR75-ASB3A0A0A6YYF3 556 aa8.07□□□□□ -1.12
TRIM55-203ENST00000350034 CCDC69A6NI79 296 aa8.07□□□□□ -1.12
TRIM55-203ENST00000350034 FMNL1O95466 1100 aaPredicted RBP8.07□□□□□ -1.12
TRIM55-203ENST00000350034 ALDH1B1P30837 517 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms