RNA–Protein interactions for RNA: ENST00000349038.8

PTBP1-201, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTBP1, Length 3,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-201ENST00000349038 PSMB7Q99436 277 aa17.28■□□□□ 0.36
PTBP1-201ENST00000349038 HDAC6Q9UBN7 1215 aa17.28■□□□□ 0.36
PTBP1-201ENST00000349038 EBAG9O00559 213 aa17.28■□□□□ 0.36
PTBP1-201ENST00000349038 CCDC172P0C7W6 258 aa17.28■□□□□ 0.36
PTBP1-201ENST00000349038 SCP2P22307 547 aa17.28■□□□□ 0.36
PTBP1-201ENST00000349038 CASP1P29466 404 aa17.28■□□□□ 0.36
PTBP1-201ENST00000349038 CCT6AP40227 531 aaKnown RBP17.28■□□□□ 0.36
PTBP1-201ENST00000349038 ATP1A2P50993 1020 aa17.28■□□□□ 0.36
PTBP1-201ENST00000349038 PSME1Q06323 249 aa17.28■□□□□ 0.36
PTBP1-201ENST00000349038 KCTD19Q17RG1 926 aaPredicted RBP17.28■□□□□ 0.36
PTBP1-201ENST00000349038 STAMQ92783 540 aa17.28■□□□□ 0.36
PTBP1-201ENST00000349038 KCNG1Q9UIX4 513 aa17.28■□□□□ 0.36
PTBP1-201ENST00000349038 MYO1FO00160 1098 aa17.27■□□□□ 0.36
PTBP1-201ENST00000349038 ATP8B1O43520 1251 aa17.27■□□□□ 0.36
PTBP1-201ENST00000349038 BRD3Q15059 726 aa17.27■□□□□ 0.36
PTBP1-201ENST00000349038 BRMS1Q9HCU9 246 aa17.27■□□□□ 0.36
PTBP1-201ENST00000349038 NFAT5O94916 1531 aa17.27■□□□□ 0.36
PTBP1-201ENST00000349038 NCAPD2Q15021 1401 aa17.27■□□□□ 0.35
PTBP1-201ENST00000349038 GOLGA8BA8MQT2 603 aa17.27■□□□□ 0.35
PTBP1-201ENST00000349038 TEX33O43247 280 aa17.27■□□□□ 0.35
PTBP1-201ENST00000349038 ATP6V1AP38606 617 aa17.27■□□□□ 0.35
PTBP1-201ENST00000349038 PSEN1P49768 467 aa17.27■□□□□ 0.35
PTBP1-201ENST00000349038 SETQ01105 290 aaPredicted RBP17.27■□□□□ 0.35
PTBP1-201ENST00000349038 MPRIPQ6WCQ1 1025 aa17.27■□□□□ 0.35
PTBP1-201ENST00000349038 EEF2KMTQ96G04 330 aa17.27■□□□□ 0.35
PTBP1-201ENST00000349038 CEP83Q9Y592 693 aa17.27■□□□□ 0.35
PTBP1-201ENST00000349038 CTAGE9A4FU28 777 aa17.26■□□□□ 0.35
PTBP1-201ENST00000349038 CDC25AP30304 524 aa17.26■□□□□ 0.35
PTBP1-201ENST00000349038 KCTD16Q68DU8 428 aa17.26■□□□□ 0.35
PTBP1-201ENST00000349038 ZNF530Q6P9A1 599 aaPredicted RBP17.26■□□□□ 0.35
PTBP1-201ENST00000349038 EID1Q9Y6B2 187 aa17.26■□□□□ 0.35
PTBP1-201ENST00000349038 OVOS2A0A0G2JMS6 1433 aa17.26■□□□□ 0.35
PTBP1-201ENST00000349038 ACTN3Q08043 901 aaPredicted RBP17.26■□□□□ 0.35
PTBP1-201ENST00000349038 SMYD4Q8IYR2 804 aaPredicted RBP17.26■□□□□ 0.35
PTBP1-201ENST00000349038 SLF1Q9BQI6 1058 aa17.26■□□□□ 0.35
PTBP1-201ENST00000349038 TRIM10Q9UDY6 481 aa17.26■□□□□ 0.35
PTBP1-201ENST00000349038 FAM169AQ9Y6X4 670 aa17.26■□□□□ 0.35
PTBP1-201ENST00000349038 RNMTO43148 476 aaKnown RBP17.26■□□□□ 0.35
PTBP1-201ENST00000349038 AFMP43652 599 aa17.26■□□□□ 0.35
PTBP1-201ENST00000349038 WASHC4Q2M389 1173 aa17.26■□□□□ 0.35
PTBP1-201ENST00000349038 MAP9Q49MG5 647 aa17.26■□□□□ 0.35
PTBP1-201ENST00000349038 NAA16Q6N069 864 aaPredicted RBP17.26■□□□□ 0.35
PTBP1-201ENST00000349038 LLPHQ9BRT6 129 aaKnown RBP17.26■□□□□ 0.35
PTBP1-201ENST00000349038 UBXN6Q9BZV1 441 aa17.26■□□□□ 0.35
PTBP1-201ENST00000349038 CD248Q9HCU0 757 aa17.26■□□□□ 0.35
PTBP1-201ENST00000349038 RFX7Q2KHR2 1363 aa17.25■□□□□ 0.35
PTBP1-201ENST00000349038 KLF18A0A0U1RQI7 1052 aa17.25■□□□□ 0.35
PTBP1-201ENST00000349038 EXOC5O00471 708 aa17.25■□□□□ 0.35
PTBP1-201ENST00000349038 GBP6Q6ZN66 633 aa17.25■□□□□ 0.35
PTBP1-201ENST00000349038 CNPY4Q8N129 248 aa17.25■□□□□ 0.35
PTBP1-201ENST00000349038 ACBD3Q9H3P7 528 aa17.25■□□□□ 0.35
PTBP1-201ENST00000349038 L1RE1Q9UN81 338 aa17.25■□□□□ 0.35
PTBP1-201ENST00000349038 KIF28PB7ZC32 967 aa17.25■□□□□ 0.35
PTBP1-201ENST00000349038 HNRNPH1P31943 449 aaKnown RBP17.25■□□□□ 0.35
PTBP1-201ENST00000349038 INPP5BP32019 993 aa17.25■□□□□ 0.35
PTBP1-201ENST00000349038 RDXP35241 583 aaKnown RBP17.25■□□□□ 0.35
PTBP1-201ENST00000349038 HOOK1Q9UJC3 728 aaKnown RBP17.25■□□□□ 0.35
PTBP1-201ENST00000349038 MYSM1Q5VVJ2 828 aa17.24■□□□□ 0.35
PTBP1-201ENST00000349038 SPECC1LQ69YQ0 1117 aa17.24■□□□□ 0.35
PTBP1-201ENST00000349038 RAD9BQ6WBX8 426 aa17.24■□□□□ 0.35
PTBP1-201ENST00000349038 DHX32Q7L7V1 743 aaKnown RBP17.24■□□□□ 0.35
PTBP1-201ENST00000349038 PHKBQ93100 1093 aa17.24■□□□□ 0.35
PTBP1-201ENST00000349038 DBNDD2Q9BQY9 259 aa17.24■□□□□ 0.35
PTBP1-201ENST00000349038 INTS13Q9NVM9 706 aa17.24■□□□□ 0.35
PTBP1-201ENST00000349038 U3KPZ7 1027 aaPredicted RBP17.24■□□□□ 0.35
PTBP1-201ENST00000349038 MROH7-TTC4A0A0A0MT08 1334 aa17.24■□□□□ 0.35
PTBP1-201ENST00000349038 PXDNQ92626 1479 aa17.24■□□□□ 0.35
PTBP1-201ENST00000349038 MYH15Q9Y2K3 1946 aa17.24■□□□□ 0.35
PTBP1-201ENST00000349038 PFKFB2O60825 505 aa17.24■□□□□ 0.35
PTBP1-201ENST00000349038 PPFIA4O75335 1185 aa17.24■□□□□ 0.35
PTBP1-201ENST00000349038 ATP5JP18859 108 aa17.24■□□□□ 0.35
PTBP1-201ENST00000349038 TC2NQ8N9U0 490 aa17.24■□□□□ 0.35
PTBP1-201ENST00000349038 KIFC2Q96AC6 838 aa17.24■□□□□ 0.35
PTBP1-201ENST00000349038 CDC23Q9UJX2 597 aa17.24■□□□□ 0.35
PTBP1-201ENST00000349038 ZNF609O15014 1411 aa17.24■□□□□ 0.35
PTBP1-201ENST00000349038 GGCXP38435 758 aa17.24■□□□□ 0.35
PTBP1-201ENST00000349038 EFCAB13Q8IY85 973 aa17.24■□□□□ 0.35
PTBP1-201ENST00000349038 CCDC85AQ96PX6 553 aaPredicted RBP17.24■□□□□ 0.35
PTBP1-201ENST00000349038 KAT14Q9H8E8 782 aa17.24■□□□□ 0.35
PTBP1-201ENST00000349038 MKRN1Q9UHC7 482 aaKnown RBP17.24■□□□□ 0.35
PTBP1-201ENST00000349038 UBE2Q2LH0YL09 131 aa17.23■□□□□ 0.35
PTBP1-201ENST00000349038 MAP2K7O14733 419 aa17.23■□□□□ 0.35
PTBP1-201ENST00000349038 IGKV5-2P06315 115 aa17.23■□□□□ 0.35
PTBP1-201ENST00000349038 FKBP4Q02790 459 aaKnown RBP eCLIP17.23■□□□□ 0.352e-6■■■□□ 19
PTBP1-201ENST00000349038 ANO1Q5XXA6 986 aa17.23■□□□□ 0.35
PTBP1-201ENST00000349038 RIC3Q7Z5B4 369 aa17.23■□□□□ 0.35
PTBP1-201ENST00000349038 CLGNO14967 610 aa17.23■□□□□ 0.35
PTBP1-201ENST00000349038 PDIA3P30101 505 aaKnown RBP17.23■□□□□ 0.35
PTBP1-201ENST00000349038 FMR1Q06787 632 aaKnown RBP eCLIP17.23■□□□□ 0.352e-7■■□□□ 12.6
PTBP1-201ENST00000349038 RBL2Q08999 1139 aa17.23■□□□□ 0.35
PTBP1-201ENST00000349038 CEP112Q8N8E3 955 aa17.23■□□□□ 0.35
PTBP1-201ENST00000349038 KCNG4Q8TDN1 519 aa17.23■□□□□ 0.35
PTBP1-201ENST00000349038 MYL10Q9BUA6 226 aa17.23■□□□□ 0.35
PTBP1-201ENST00000349038 HSD3B7Q9H2F3 369 aa17.23■□□□□ 0.35
PTBP1-201ENST00000349038 MAPK8IP1Q9UQF2 711 aa17.23■□□□□ 0.35
PTBP1-201ENST00000349038 GNGT1P63211 74 aa17.22■□□□□ 0.35
PTBP1-201ENST00000349038 A0A087WUV0 522 aaPredicted RBP17.22■□□□□ 0.35
PTBP1-201ENST00000349038 NEBLO76041 1014 aa17.22■□□□□ 0.35
PTBP1-201ENST00000349038 DDX58O95786 925 aaKnown RBP17.22■□□□□ 0.35
PTBP1-201ENST00000349038 TFCP2Q12800 502 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 196.7 ms