RNA–Protein interactions for RNA: ENST00000348721.3

CISH-201, Transcript of cytokine inducible SH2 containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CISH, Length 2,043 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CISH-201ENST00000348721 ZNF396Q96N95 335 aaPredicted RBP18.76■□□□□ 0.59
CISH-201ENST00000348721 FUCA2Q9BTY2 467 aa18.76■□□□□ 0.59
CISH-201ENST00000348721 CHD4Q14839 1912 aa18.76■□□□□ 0.59
CISH-201ENST00000348721 ZBTB43O43298 467 aa18.76■□□□□ 0.59
CISH-201ENST00000348721 IGSF3O75054 1194 aa18.76■□□□□ 0.59
CISH-201ENST00000348721 CDKL5O76039 1030 aa18.76■□□□□ 0.59
CISH-201ENST00000348721 GUCY1B3Q02153 619 aa18.76■□□□□ 0.59
CISH-201ENST00000348721 MECOMQ03112 1051 aa18.76■□□□□ 0.59
CISH-201ENST00000348721 DMTNQ08495 405 aa18.76■□□□□ 0.59
CISH-201ENST00000348721 FAM217BQ9NTX9 383 aaPredicted RBP18.76■□□□□ 0.59
CISH-201ENST00000348721 TRIM37O94972 964 aa18.75■□□□□ 0.59
CISH-201ENST00000348721 CDC27P30260 824 aa18.75■□□□□ 0.59
CISH-201ENST00000348721 DYNLL1P63167 89 aaKnown RBP18.75■□□□□ 0.59
CISH-201ENST00000348721 NTRK3Q16288 839 aa18.75■□□□□ 0.59
CISH-201ENST00000348721 SERPINB2P05120 415 aa18.74■□□□□ 0.59
CISH-201ENST00000348721 HMGB2P26583 209 aaKnown RBP18.74■□□□□ 0.59
CISH-201ENST00000348721 NFXL1Q6ZNB6 911 aa18.74■□□□□ 0.59
CISH-201ENST00000348721 C15orf52Q6ZUT6 534 aaKnown RBP18.74■□□□□ 0.59
CISH-201ENST00000348721 TMTC2Q8N394 836 aa18.74■□□□□ 0.59
CISH-201ENST00000348721 NID2Q14112 1375 aa18.74■□□□□ 0.59
CISH-201ENST00000348721 DNTTIP2Q5QJE6 756 aaKnown RBP18.74■□□□□ 0.59
CISH-201ENST00000348721 CPLX2Q6PUV4 134 aaKnown RBP18.74■□□□□ 0.59
CISH-201ENST00000348721 PIBF1Q8WXW3 757 aa18.74■□□□□ 0.59
CISH-201ENST00000348721 USP28Q96RU2 1077 aa18.74■□□□□ 0.59
CISH-201ENST00000348721 ANKIB1Q9P2G1 1089 aa18.74■□□□□ 0.59
CISH-201ENST00000348721 SLC12A7Q9Y666 1083 aa18.74■□□□□ 0.59
CISH-201ENST00000348721 MYH15Q9Y2K3 1946 aa18.74■□□□□ 0.59
CISH-201ENST00000348721 XDHP47989 1333 aa18.73■□□□□ 0.59
CISH-201ENST00000348721 FGRP09769 529 aa18.73■□□□□ 0.59
CISH-201ENST00000348721 SART3Q15020 963 aaKnown RBP18.73■□□□□ 0.59
CISH-201ENST00000348721 OTUD7BQ6GQQ9 843 aa18.73■□□□□ 0.59
CISH-201ENST00000348721 MICU3Q86XE3 530 aa18.73■□□□□ 0.59
CISH-201ENST00000348721 PROM2Q8N271 834 aa18.73■□□□□ 0.59
CISH-201ENST00000348721 RNF214Q8ND24 703 aa18.73■□□□□ 0.59
CISH-201ENST00000348721 GTPBP4Q9BZE4 634 aaKnown RBP18.73■□□□□ 0.59
CISH-201ENST00000348721 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.73■□□□□ 0.593e-6■■□□□ 12.1
CISH-201ENST00000348721 BRWD3Q6RI45 1802 aa18.73■□□□□ 0.59
CISH-201ENST00000348721 CCDC69A6NI79 296 aa18.73■□□□□ 0.59
CISH-201ENST00000348721 MINDY4BA8MYZ0 360 aa18.73■□□□□ 0.59
CISH-201ENST00000348721 RCAN1P53805 252 aa18.73■□□□□ 0.59
CISH-201ENST00000348721 RRP12Q5JTH9 1297 aaKnown RBP18.73■□□□□ 0.59
CISH-201ENST00000348721 TDRD7Q8NHU6 1098 aaKnown RBP18.73■□□□□ 0.59
CISH-201ENST00000348721 DDX19AQ9NUU7 478 aaKnown RBP18.73■□□□□ 0.59
CISH-201ENST00000348721 DACT1Q9NYF0 836 aa18.73■□□□□ 0.59
CISH-201ENST00000348721 GOLGA8AA7E2F4 631 aa18.72■□□□□ 0.59
CISH-201ENST00000348721 PCP11498 1178 aaKnown RBP18.72■□□□□ 0.59
CISH-201ENST00000348721 RXRAP19793 462 aa18.72■□□□□ 0.59
CISH-201ENST00000348721 PRDX5P30044 214 aa18.72■□□□□ 0.59
CISH-201ENST00000348721 ST5P78524 1137 aa18.72■□□□□ 0.59
CISH-201ENST00000348721 CHAF1AQ13111 956 aaPredicted RBP18.72■□□□□ 0.59
CISH-201ENST00000348721 SPTY2D1Q68D10 685 aaPredicted RBP18.72■□□□□ 0.59
CISH-201ENST00000348721 BRAPQ7Z569 592 aa18.72■□□□□ 0.59
CISH-201ENST00000348721 RPGRQ92834 1020 aaKnown RBP18.72■□□□□ 0.59
CISH-201ENST00000348721 NUP62CLQ9H1M0 184 aa18.72■□□□□ 0.59
CISH-201ENST00000348721 PODXL2Q9NZ53 605 aa18.72■□□□□ 0.59
CISH-201ENST00000348721 RTEL1Q9NZ71 1219 aa18.72■□□□□ 0.59
CISH-201ENST00000348721 WTAPQ15007 396 aa18.71■□□□□ 0.59
CISH-201ENST00000348721 CTR9Q6PD62 1173 aa18.71■□□□□ 0.59
CISH-201ENST00000348721 SYNE3Q6ZMZ3 975 aa18.71■□□□□ 0.59
CISH-201ENST00000348721 ESR2Q92731 530 aa18.71■□□□□ 0.59
CISH-201ENST00000348721 TOMM22Q9NS69 142 aa18.71■□□□□ 0.59
CISH-201ENST00000348721 MYH13Q9UKX3 1938 aa18.71■□□□□ 0.59
CISH-201ENST00000348721 HOXA10P31260 410 aaPredicted RBP18.71■□□□□ 0.59
CISH-201ENST00000348721 CEBPZQ03701 1054 aaKnown RBP18.71■□□□□ 0.59
CISH-201ENST00000348721 TXNRD1Q16881 649 aa18.71■□□□□ 0.59
CISH-201ENST00000348721 RBM43Q6ZSC3 357 aaKnown RBP18.71■□□□□ 0.59
CISH-201ENST00000348721 WDR66Q8TBY9 1149 aa18.71■□□□□ 0.59
CISH-201ENST00000348721 MYL10Q9BUA6 226 aa18.71■□□□□ 0.59
CISH-201ENST00000348721 FTOQ9C0B1 505 aaKnown RBP eCLIP18.71■□□□□ 0.593e-6■■■□□ 16.5
CISH-201ENST00000348721 ERICH2A1L162 156 aa18.7■□□□□ 0.58
CISH-201ENST00000348721 KLRG2A4D1S0 409 aaPredicted RBP18.7■□□□□ 0.58
CISH-201ENST00000348721 RANBP6O60518 1105 aaKnown RBP18.7■□□□□ 0.58
CISH-201ENST00000348721 IFNAR1P17181 557 aa18.7■□□□□ 0.58
CISH-201ENST00000348721 IARSP41252 1262 aaKnown RBP18.7■□□□□ 0.58
CISH-201ENST00000348721 SEC23AQ15436 765 aa18.7■□□□□ 0.58
CISH-201ENST00000348721 SLC51AQ86UW1 340 aa18.7■□□□□ 0.58
CISH-201ENST00000348721 BICD2Q8TD16 824 aa18.7■□□□□ 0.58
CISH-201ENST00000348721 RBM17Q96I25 401 aaKnown RBP18.7■□□□□ 0.58
CISH-201ENST00000348721 ALG1Q9BT22 464 aa18.7■□□□□ 0.58
CISH-201ENST00000348721 CLSTN2Q9H4D0 955 aa18.7■□□□□ 0.58
CISH-201ENST00000348721 GJB4Q9NTQ9 266 aa18.7■□□□□ 0.58
CISH-201ENST00000348721 STK36Q9NRP7 1315 aa18.7■□□□□ 0.58
CISH-201ENST00000348721 SMIM22K7EJ46 135 aa18.69■□□□□ 0.58
CISH-201ENST00000348721 POLRMTO00411 1230 aaKnown RBP18.69■□□□□ 0.58
CISH-201ENST00000348721 BBOX1O75936 387 aa18.69■□□□□ 0.58
CISH-201ENST00000348721 KIF23Q02241 960 aaPredicted RBP18.69■□□□□ 0.58
CISH-201ENST00000348721 DDR1Q08345 913 aa18.69■□□□□ 0.58
CISH-201ENST00000348721 MAP3K11Q16584 847 aa18.69■□□□□ 0.58
CISH-201ENST00000348721 ZKSCAN3Q9BRR0 538 aa18.69■□□□□ 0.58
CISH-201ENST00000348721 CRNKL1Q9BZJ0 848 aaKnown RBP18.69■□□□□ 0.58
CISH-201ENST00000348721 ATP8A2Q9NTI2 1148 aa18.69■□□□□ 0.58
CISH-201ENST00000348721 NR1I2O75469 434 aa18.69■□□□□ 0.58
CISH-201ENST00000348721 GPSM2P81274 684 aa18.69■□□□□ 0.58
CISH-201ENST00000348721 NOLC1Q14978 699 aaKnown RBP eCLIP18.69■□□□□ 0.58
CISH-201ENST00000348721 CCDC144CPQ8IYA2 1237 aa18.69■□□□□ 0.58
CISH-201ENST00000348721 PHKBQ93100 1093 aa18.69■□□□□ 0.58
CISH-201ENST00000348721 AIFM3Q96NN9 605 aa18.69■□□□□ 0.58
CISH-201ENST00000348721 DCP1AQ9NPI6 582 aaPredicted RBP18.69■□□□□ 0.58
CISH-201ENST00000348721 POLR3EQ9NVU0 708 aa18.69■□□□□ 0.58
CISH-201ENST00000348721 AATFQ9NY61 560 aaKnown RBP eCLIP18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms