RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 PCDH11YQ9BZA8 1340 aa12.43□□□□□ -0.42
SMARCE1-202ENST00000348513 DYTNA2CJ06 578 aa12.43□□□□□ -0.42
SMARCE1-202ENST00000348513 DNM1Q05193 864 aaKnown RBP12.43□□□□□ -0.42
SMARCE1-202ENST00000348513 SLC20A2Q08357 652 aa12.43□□□□□ -0.42
SMARCE1-202ENST00000348513 HLTFQ14527 1009 aaKnown RBP eCLIP12.43□□□□□ -0.42
SMARCE1-202ENST00000348513 KANK3Q6NY19 840 aa12.43□□□□□ -0.42
SMARCE1-202ENST00000348513 SNX21Q969T3 373 aa12.43□□□□□ -0.42
SMARCE1-202ENST00000348513 DHX58Q96C10 678 aa12.43□□□□□ -0.42
SMARCE1-202ENST00000348513 PLIN2Q99541 437 aa12.43□□□□□ -0.42
SMARCE1-202ENST00000348513 SPECC1Q5M775 1068 aa12.42□□□□□ -0.42
SMARCE1-202ENST00000348513 ERMNQ8TAM6 284 aa12.42□□□□□ -0.42
SMARCE1-202ENST00000348513 SP4Q02446 784 aa12.42□□□□□ -0.42
SMARCE1-202ENST00000348513 ORAI2Q96SN7 254 aa12.42□□□□□ -0.42
SMARCE1-202ENST00000348513 TNNI2P48788 182 aa12.42□□□□□ -0.42
SMARCE1-202ENST00000348513 ANO6Q4KMQ2 910 aa12.42□□□□□ -0.42
SMARCE1-202ENST00000348513 MFSD4BQ5TF39 518 aa12.42□□□□□ -0.42
SMARCE1-202ENST00000348513 TMTC2Q8N394 836 aa12.42□□□□□ -0.42
SMARCE1-202ENST00000348513 ALS2CR12Q96Q35 445 aa12.42□□□□□ -0.42
SMARCE1-202ENST00000348513 ATG3Q9NT62 314 aa12.42□□□□□ -0.42
SMARCE1-202ENST00000348513 LDHBP07195 334 aaKnown RBP12.42□□□□□ -0.42
SMARCE1-202ENST00000348513 ACBD5Q5T8D3 534 aaPredicted RBP12.42□□□□□ -0.42
SMARCE1-202ENST00000348513 JADE2Q9NQC1 790 aa12.42□□□□□ -0.42
SMARCE1-202ENST00000348513 PPFIA2O75334 1257 aa12.42□□□□□ -0.42
SMARCE1-202ENST00000348513 GCFC2P16383 781 aaKnown RBP12.42□□□□□ -0.42
SMARCE1-202ENST00000348513 AKNAD1Q5T1N1 836 aa12.42□□□□□ -0.42
SMARCE1-202ENST00000348513 KLHDC4Q8TBB5 520 aa12.42□□□□□ -0.42
SMARCE1-202ENST00000348513 EXOC4Q96A65 974 aa12.42□□□□□ -0.42
SMARCE1-202ENST00000348513 FAF1Q9UNN5 650 aaPredicted RBP12.42□□□□□ -0.42
SMARCE1-202ENST00000348513 RNF8O76064 485 aa12.41□□□□□ -0.42
SMARCE1-202ENST00000348513 ASIC1P78348 528 aa12.41□□□□□ -0.42
SMARCE1-202ENST00000348513 MPHOSPH6Q99547 160 aaKnown RBP12.41□□□□□ -0.42
SMARCE1-202ENST00000348513 BAG1Q99933 345 aaPredicted RBP12.41□□□□□ -0.42
SMARCE1-202ENST00000348513 ETAA1Q9NY74 926 aa12.41□□□□□ -0.42
SMARCE1-202ENST00000348513 TRAPPC3LQ5T215 181 aa12.41□□□□□ -0.42
SMARCE1-202ENST00000348513 IP6K1Q92551 441 aa12.41□□□□□ -0.42
SMARCE1-202ENST00000348513 MCM7P33993 719 aa12.41□□□□□ -0.42
SMARCE1-202ENST00000348513 POLE2P56282 527 aa12.41□□□□□ -0.42
SMARCE1-202ENST00000348513 UBE4AQ14139 1066 aa12.41□□□□□ -0.42
SMARCE1-202ENST00000348513 HOOK3Q86VS8 718 aa12.41□□□□□ -0.42
SMARCE1-202ENST00000348513 SMC5Q8IY18 1101 aa12.41□□□□□ -0.42
SMARCE1-202ENST00000348513 GJA3Q9Y6H8 435 aa12.41□□□□□ -0.42
SMARCE1-202ENST00000348513 MAPKBP1O60336 1514 aa12.41□□□□□ -0.42
SMARCE1-202ENST00000348513 EIF3CLB5ME19 914 aaKnown RBP12.41□□□□□ -0.42
SMARCE1-202ENST00000348513 CREB3L3Q68CJ9 461 aa12.41□□□□□ -0.42
SMARCE1-202ENST00000348513 PRPF38AQ8NAV1 312 aaKnown RBP12.41□□□□□ -0.42
SMARCE1-202ENST00000348513 EIF3CQ99613 913 aaKnown RBP12.41□□□□□ -0.42
SMARCE1-202ENST00000348513 RMI1Q9H9A7 625 aa12.41□□□□□ -0.42
SMARCE1-202ENST00000348513 CPA1P15085 419 aa12.4□□□□□ -0.42
SMARCE1-202ENST00000348513 AK2P54819 239 aa12.4□□□□□ -0.42
SMARCE1-202ENST00000348513 UBASH3AP57075 661 aa12.4□□□□□ -0.42
SMARCE1-202ENST00000348513 GRIPAP1Q4V328 841 aa12.4□□□□□ -0.42
SMARCE1-202ENST00000348513 JDP2Q8WYK2 163 aa12.4□□□□□ -0.42
SMARCE1-202ENST00000348513 STMN2Q93045 179 aa12.4□□□□□ -0.42
SMARCE1-202ENST00000348513 RNF216Q9NWF9 866 aaPredicted RBP12.4□□□□□ -0.42
SMARCE1-202ENST00000348513 LARSQ9P2J5 1176 aaKnown RBP12.4□□□□□ -0.42
SMARCE1-202ENST00000348513 DPH6Q7L8W6 267 aa12.4□□□□□ -0.42
SMARCE1-202ENST00000348513 RRP36Q96EU6 259 aaKnown RBP12.4□□□□□ -0.42
SMARCE1-202ENST00000348513 ZNF594Q96JF6 807 aaPredicted RBP12.4□□□□□ -0.42
SMARCE1-202ENST00000348513 PYM1Q9BRP8 204 aaKnown RBP12.4□□□□□ -0.42
SMARCE1-202ENST00000348513 CTAGE9A4FU28 777 aa12.4□□□□□ -0.42
SMARCE1-202ENST00000348513 TIMM10P62072 90 aa12.4□□□□□ -0.42
SMARCE1-202ENST00000348513 PNMA8AQ86V59 439 aaPredicted RBP12.4□□□□□ -0.42
SMARCE1-202ENST00000348513 YIPF3Q9GZM5 350 aa12.4□□□□□ -0.42
SMARCE1-202ENST00000348513 PKD2L1Q9P0L9 805 aa12.4□□□□□ -0.42
SMARCE1-202ENST00000348513 ARID5AQ03989 594 aa12.4□□□□□ -0.42
SMARCE1-202ENST00000348513 SEMA3FQ13275 785 aa12.4□□□□□ -0.42
SMARCE1-202ENST00000348513 LRRC27Q9C0I9 530 aa12.4□□□□□ -0.42
SMARCE1-202ENST00000348513 MED4Q9NPJ6 270 aa12.4□□□□□ -0.42
SMARCE1-202ENST00000348513 RMND1Q9NWS8 449 aa12.4□□□□□ -0.42
SMARCE1-202ENST00000348513 CHUKO15111 745 aa12.4□□□□□ -0.43
SMARCE1-202ENST00000348513 MBD4O95243 580 aa12.4□□□□□ -0.43
SMARCE1-202ENST00000348513 KIAA1524Q8TCG1 905 aa12.4□□□□□ -0.43
SMARCE1-202ENST00000348513 SYNCQ9H7C4 482 aa12.4□□□□□ -0.43
SMARCE1-202ENST00000348513 DACT1Q9NYF0 836 aa12.4□□□□□ -0.43
SMARCE1-202ENST00000348513 CCNL1Q9UK58 526 aaPredicted RBP12.4□□□□□ -0.43
SMARCE1-202ENST00000348513 STAMBPO95630 424 aa12.39□□□□□ -0.43
SMARCE1-202ENST00000348513 EIF6P56537 245 aaKnown RBP12.39□□□□□ -0.43
SMARCE1-202ENST00000348513 MUM1Q2TAK8 710 aa12.39□□□□□ -0.43
SMARCE1-202ENST00000348513 AOPEPQ8N6M6 819 aa12.39□□□□□ -0.43
SMARCE1-202ENST00000348513 MRPS27Q92552 414 aaKnown RBP12.39□□□□□ -0.43
SMARCE1-202ENST00000348513 HAUS1Q96CS2 278 aa12.39□□□□□ -0.43
SMARCE1-202ENST00000348513 POLR3AO14802 1390 aaPredicted RBP12.39□□□□□ -0.43
SMARCE1-202ENST00000348513 RHOXF2BP0C7M4 288 aa12.39□□□□□ -0.43
SMARCE1-202ENST00000348513 EHBP1Q8NDI1 1231 aa12.39□□□□□ -0.43
SMARCE1-202ENST00000348513 KCNG4Q8TDN1 519 aa12.39□□□□□ -0.43
SMARCE1-202ENST00000348513 PARD3Q8TEW0 1356 aa12.39□□□□□ -0.43
SMARCE1-202ENST00000348513 RHOXF2Q9BQY4 288 aa12.39□□□□□ -0.43
SMARCE1-202ENST00000348513 DDX41Q9UJV9 622 aaKnown RBP12.39□□□□□ -0.43
SMARCE1-202ENST00000348513 SPDYE3A6NKU9 549 aa12.39□□□□□ -0.43
SMARCE1-202ENST00000348513 ITGA6P23229 1130 aa12.39□□□□□ -0.43
SMARCE1-202ENST00000348513 GNAQP50148 359 aa12.39□□□□□ -0.43
SMARCE1-202ENST00000348513 MAP3K9P80192 1104 aa12.39□□□□□ -0.43
SMARCE1-202ENST00000348513 EP400NLQ6ZTU2 488 aa12.39□□□□□ -0.43
SMARCE1-202ENST00000348513 FAM71BQ8TC56 605 aa12.39□□□□□ -0.43
SMARCE1-202ENST00000348513 TESK2Q96S53 571 aa12.39□□□□□ -0.43
SMARCE1-202ENST00000348513 DNAJC25Q9H1X3 360 aa12.39□□□□□ -0.43
SMARCE1-202ENST00000348513 LGR6Q9HBX8 967 aa12.39□□□□□ -0.43
SMARCE1-202ENST00000348513 C6orf50Q9HD87 102 aa12.39□□□□□ -0.43
SMARCE1-202ENST00000348513 AKR1B10O60218 316 aa12.39□□□□□ -0.43
SMARCE1-202ENST00000348513 UFL1O94874 794 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms