RNA–Protein interactions for RNA: ENST00000345057.8

TRADD-201, Transcript of TNFRSF1A associated via death domain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRADD, Length 1,877 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-201ENST00000345057 IFFO2Q5TF58 517 aa29.6■■■□□ 2.33
TRADD-201ENST00000345057 TMEM87AQ8NBN3 555 aa29.6■■■□□ 2.33
TRADD-201ENST00000345057 CNKSR1Q969H4 720 aa29.6■■■□□ 2.33
TRADD-201ENST00000345057 DCP1AQ9NPI6 582 aaPredicted RBP29.6■■■□□ 2.33
TRADD-201ENST00000345057 MROH7-TTC4A0A0A0MT08 1334 aa29.6■■■□□ 2.33
TRADD-201ENST00000345057 CTDNEP1O95476 244 aa29.59■■■□□ 2.33
TRADD-201ENST00000345057 CPLX2Q6PUV4 134 aaKnown RBP29.59■■■□□ 2.33
TRADD-201ENST00000345057 CDKL5O76039 1030 aa29.59■■■□□ 2.33
TRADD-201ENST00000345057 RRP12Q5JTH9 1297 aaKnown RBP29.59■■■□□ 2.33
TRADD-201ENST00000345057 CTR9Q6PD62 1173 aa29.59■■■□□ 2.33
TRADD-201ENST00000345057 SYNE3Q6ZMZ3 975 aa29.59■■■□□ 2.33
TRADD-201ENST00000345057 NFXL1Q6ZNB6 911 aa29.59■■■□□ 2.33
TRADD-201ENST00000345057 LY9Q9HBG7 655 aa29.59■■■□□ 2.33
TRADD-201ENST00000345057 MFSD14BQ5SR56 506 aa29.58■■■□□ 2.33
TRADD-201ENST00000345057 DDX11Q96FC9 970 aa29.58■■■□□ 2.33
TRADD-201ENST00000345057 NCOA5Q9HCD5 579 aaKnown RBP29.58■■■□□ 2.33
TRADD-201ENST00000345057 HPS5Q9UPZ3 1129 aa29.58■■■□□ 2.33
TRADD-201ENST00000345057 CCDC69A6NI79 296 aa29.57■■■□□ 2.32
TRADD-201ENST00000345057 FGRP09769 529 aa29.57■■■□□ 2.32
TRADD-201ENST00000345057 PLCG2P16885 1265 aa29.57■■■□□ 2.32
TRADD-201ENST00000345057 METAP2P50579 478 aaKnown RBP eCLIP29.57■■■□□ 2.32
TRADD-201ENST00000345057 CDC37L1Q7L3B6 337 aa29.57■■■□□ 2.32
TRADD-201ENST00000345057 AMOTL1Q8IY63 956 aa29.57■■■□□ 2.32
TRADD-201ENST00000345057 RGS22Q8NE09 1264 aa29.57■■■□□ 2.32
TRADD-201ENST00000345057 ZSCAN16Q9H4T2 348 aaPredicted RBP29.57■■■□□ 2.32
TRADD-201ENST00000345057 APOA5Q6Q788 366 aa29.57■■■□□ 2.32
TRADD-201ENST00000345057 SLC16A10Q8TF71 515 aa29.57■■■□□ 2.32
TRADD-201ENST00000345057 UBAC1Q9BSL1 405 aa29.57■■■□□ 2.32
TRADD-201ENST00000345057 USP17L12C9JPN9 530 aa29.56■■■□□ 2.32
TRADD-201ENST00000345057 USP17L21D6R901 530 aa29.56■■■□□ 2.32
TRADD-201ENST00000345057 ZBTB43O43298 467 aa29.56■■■□□ 2.32
TRADD-201ENST00000345057 RCAN1P53805 252 aa29.56■■■□□ 2.32
TRADD-201ENST00000345057 FAM163AQ96GL9 167 aaPredicted RBP29.56■■■□□ 2.32
TRADD-201ENST00000345057 GZF1Q9H116 711 aaPredicted RBP29.56■■■□□ 2.32
TRADD-201ENST00000345057 SLC12A7Q9Y666 1083 aa29.56■■■□□ 2.32
TRADD-201ENST00000345057 USP5P45974 858 aa29.55■■■□□ 2.32
TRADD-201ENST00000345057 WTAPQ15007 396 aa29.55■■■□□ 2.32
TRADD-201ENST00000345057 INCENPQ9NQS7 918 aa29.55■■■□□ 2.32
TRADD-201ENST00000345057 LAMB1P07942 1786 aa29.55■■■□□ 2.32
TRADD-201ENST00000345057 G3V3G9 751 aa29.55■■■□□ 2.32
TRADD-201ENST00000345057 RIMBP2O15034 1052 aa29.55■■■□□ 2.32
TRADD-201ENST00000345057 DCAF8Q5TAQ9 597 aa29.55■■■□□ 2.32
TRADD-201ENST00000345057 TACC3Q9Y6A5 838 aa29.55■■■□□ 2.32
TRADD-201ENST00000345057 CC2D2BQ6DHV5 1058 aa29.54■■■□□ 2.32
TRADD-201ENST00000345057 ISY1Q9ULR0 285 aaKnown RBP29.54■■■□□ 2.32
TRADD-201ENST00000345057 BAZ2AQ9UIF9 1905 aaKnown RBP29.54■■■□□ 2.32
TRADD-201ENST00000345057 NID2Q14112 1375 aa29.53■■■□□ 2.32
TRADD-201ENST00000345057 ORC4O43929 436 aa29.53■■■□□ 2.32
TRADD-201ENST00000345057 KRT85P78386 507 aa29.53■■■□□ 2.32
TRADD-201ENST00000345057 PDE4BQ07343 736 aa29.53■■■□□ 2.32
TRADD-201ENST00000345057 FOXD4L6Q3SYB3 417 aaPredicted RBP29.53■■■□□ 2.32
TRADD-201ENST00000345057 FOXD4L3Q6VB84 417 aaPredicted RBP29.53■■■□□ 2.32
TRADD-201ENST00000345057 RTFDC1Q9BY42 306 aaPredicted RBP29.53■■■□□ 2.32
TRADD-201ENST00000345057 GPR75-ASB3A0A0A6YYF3 556 aa29.53■■■□□ 2.32
TRADD-201ENST00000345057 DIXDC1Q155Q3 683 aa29.53■■■□□ 2.32
TRADD-201ENST00000345057 IQCA1Q86XH1 822 aa29.53■■■□□ 2.32
TRADD-201ENST00000345057 DTNBO60941 627 aa29.52■■■□□ 2.32
TRADD-201ENST00000345057 GTF2IP78347 998 aa29.52■■■□□ 2.32
TRADD-201ENST00000345057 CHAMP1Q96JM3 812 aa29.52■■■□□ 2.32
TRADD-201ENST00000345057 MYH2Q9UKX2 1941 aa29.52■■■□□ 2.32
TRADD-201ENST00000345057 GRIPAP1Q4V328 841 aa29.51■■■□□ 2.31
TRADD-201ENST00000345057 USP48Q86UV5 1035 aa29.51■■■□□ 2.31
TRADD-201ENST00000345057 NKX2-3Q8TAU0 364 aa29.51■■■□□ 2.31
TRADD-201ENST00000345057 MCM9Q9NXL9 1143 aa29.51■■■□□ 2.31
TRADD-201ENST00000345057 CNPY2Q9Y2B0 182 aa29.51■■■□□ 2.31
TRADD-201ENST00000345057 GOLGA8AA7E2F4 631 aa29.51■■■□□ 2.31
TRADD-201ENST00000345057 GRIK5Q16478 980 aa29.51■■■□□ 2.31
TRADD-201ENST00000345057 PODNQ7Z5L7 613 aa29.51■■■□□ 2.31
TRADD-201ENST00000345057 SH3RF3Q8TEJ3 882 aaPredicted RBP29.51■■■□□ 2.31
TRADD-201ENST00000345057 GAKO14976 1311 aa29.5■■■□□ 2.31
TRADD-201ENST00000345057 BTDP43251 543 aa29.5■■■□□ 2.31
TRADD-201ENST00000345057 DNM1Q05193 864 aaKnown RBP29.5■■■□□ 2.31
TRADD-201ENST00000345057 PPP2R5BQ15173 497 aa29.5■■■□□ 2.31
TRADD-201ENST00000345057 MICU3Q86XE3 530 aa29.5■■■□□ 2.31
TRADD-201ENST00000345057 MKRN1Q9UHC7 482 aaKnown RBP29.5■■■□□ 2.31
TRADD-201ENST00000345057 DDX52Q9Y2R4 599 aaKnown RBP eCLIP29.5■■■□□ 2.31
TRADD-201ENST00000345057 CCDC196A0A1B0GTZ2 297 aa29.49■■■□□ 2.31
TRADD-201ENST00000345057 FERMT3Q86UX7 667 aa29.49■■■□□ 2.31
TRADD-201ENST00000345057 ORC3Q9UBD5 711 aaPredicted RBP29.49■■■□□ 2.31
TRADD-201ENST00000345057 STK11IPQ8N1F8 1099 aa29.48■■■□□ 2.31
TRADD-201ENST00000345057 SCAND2PQ9GZW5 306 aaPredicted RBP29.48■■■□□ 2.31
TRADD-201ENST00000345057 C10orf71Q711Q0 1435 aa29.48■■■□□ 2.31
TRADD-201ENST00000345057 CYP2D7A0A087X1C5 515 aa29.48■■■□□ 2.31
TRADD-201ENST00000345057 RANBP6O60518 1105 aaKnown RBP29.48■■■□□ 2.31
TRADD-201ENST00000345057 OLFM4Q6UX06 510 aa29.48■■■□□ 2.31
TRADD-201ENST00000345057 GPT2Q8TD30 523 aa29.48■■■□□ 2.31
TRADD-201ENST00000345057 SYAP1Q96A49 352 aaPredicted RBP29.48■■■□□ 2.31
TRADD-201ENST00000345057 ZSCAN10Q96SZ4 725 aaPredicted RBP29.48■■■□□ 2.31
TRADD-201ENST00000345057 ROBO3Q96MS0 1386 aa29.47■■■□□ 2.31
TRADD-201ENST00000345057 TNKSO95271 1327 aa29.47■■■□□ 2.31
TRADD-201ENST00000345057 FDPSP14324 419 aaKnown RBP29.47■■■□□ 2.31
TRADD-201ENST00000345057 UBE2HP62256 183 aa29.47■■■□□ 2.31
TRADD-201ENST00000345057 RESTQ13127 1097 aa29.47■■■□□ 2.31
TRADD-201ENST00000345057 C12orf60Q5U649 245 aa29.47■■■□□ 2.31
TRADD-201ENST00000345057 SUPT20HQ8NEM7 779 aa29.47■■■□□ 2.31
TRADD-201ENST00000345057 ZNF287Q9HBT7 754 aa29.47■■■□□ 2.31
TRADD-201ENST00000345057 CHRNA5P30532 468 aa29.46■■■□□ 2.31
TRADD-201ENST00000345057 L1TD1Q5T7N2 865 aaKnown RBP29.46■■■□□ 2.31
TRADD-201ENST00000345057 FIBPO43427 364 aa29.46■■■□□ 2.31
TRADD-201ENST00000345057 ATL3Q6DD88 541 aa29.46■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms