RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 ORC3Q9UBD5 711 aaPredicted RBP21.75■■□□□ 1.07
HOXA9-201ENST00000343483 ELP1O95163 1332 aa21.74■■□□□ 1.07
HOXA9-201ENST00000343483 MSL1Q68DK7 614 aa21.74■■□□□ 1.07
HOXA9-201ENST00000343483 ZNF804AQ7Z570 1209 aa21.74■■□□□ 1.07
HOXA9-201ENST00000343483 DZIP1Q86YF9 867 aaKnown RBP21.74■■□□□ 1.07
HOXA9-201ENST00000343483 ZBTB43O43298 467 aa21.73■■□□□ 1.07
HOXA9-201ENST00000343483 UFL1O94874 794 aa21.73■■□□□ 1.07
HOXA9-201ENST00000343483 LETM1O95202 739 aaPredicted RBP21.73■■□□□ 1.07
HOXA9-201ENST00000343483 CCDC144CPQ8IYA2 1237 aa21.73■■□□□ 1.07
HOXA9-201ENST00000343483 PDLIM2Q96JY6 352 aa21.73■■□□□ 1.07
HOXA9-201ENST00000343483 ZKSCAN3Q9BRR0 538 aa21.73■■□□□ 1.07
HOXA9-201ENST00000343483 BRIP1Q9BX63 1249 aa21.73■■□□□ 1.07
HOXA9-201ENST00000343483 LIFRP42702 1097 aa21.73■■□□□ 1.07
HOXA9-201ENST00000343483 SART3Q15020 963 aaKnown RBP21.73■■□□□ 1.07
HOXA9-201ENST00000343483 SPTY2D1Q68D10 685 aaPredicted RBP21.73■■□□□ 1.07
HOXA9-201ENST00000343483 SGMS1Q86VZ5 419 aa21.73■■□□□ 1.07
HOXA9-201ENST00000343483 LEO1Q8WVC0 666 aaPredicted RBP21.73■■□□□ 1.07
HOXA9-201ENST00000343483 MYL10Q9BUA6 226 aa21.73■■□□□ 1.07
HOXA9-201ENST00000343483 UTRNP46939 3433 aa21.72■■□□□ 1.07
HOXA9-201ENST00000343483 CCDC69A6NI79 296 aa21.72■■□□□ 1.07
HOXA9-201ENST00000343483 ADD1P35611 737 aaKnown RBP21.72■■□□□ 1.07
HOXA9-201ENST00000343483 SLC12A7Q9Y666 1083 aa21.72■■□□□ 1.07
HOXA9-201ENST00000343483 QSER1Q2KHR3 1735 aa21.72■■□□□ 1.07
HOXA9-201ENST00000343483 CYP2D7A0A087X1C5 515 aa21.71■■□□□ 1.07
HOXA9-201ENST00000343483 SMIM22K7EJ46 135 aa21.71■■□□□ 1.07
HOXA9-201ENST00000343483 BBOX1O75936 387 aa21.71■■□□□ 1.07
HOXA9-201ENST00000343483 C8orf76Q96K31 380 aa21.71■■□□□ 1.07
HOXA9-201ENST00000343483 ANAPC4Q9UJX5 808 aa21.71■■□□□ 1.07
HOXA9-201ENST00000343483 GGA1Q9UJY5 639 aa21.71■■□□□ 1.07
HOXA9-201ENST00000343483 MYH13Q9UKX3 1938 aa21.71■■□□□ 1.07
HOXA9-201ENST00000343483 GOLGA6L4A6NEF3 574 aa21.71■■□□□ 1.07
HOXA9-201ENST00000343483 GOLGA8AA7E2F4 631 aa21.71■■□□□ 1.07
HOXA9-201ENST00000343483 OTUD7BQ6GQQ9 843 aa21.71■■□□□ 1.07
HOXA9-201ENST00000343483 TDRD7Q8NHU6 1098 aaKnown RBP21.71■■□□□ 1.07
HOXA9-201ENST00000343483 WDR66Q8TBY9 1149 aa21.71■■□□□ 1.07
HOXA9-201ENST00000343483 CRNKL1Q9BZJ0 848 aaKnown RBP21.71■■□□□ 1.07
HOXA9-201ENST00000343483 CFAP45Q9UL16 551 aa21.71■■□□□ 1.07
HOXA9-201ENST00000343483 ERICH2A1L162 156 aa21.7■■□□□ 1.06
HOXA9-201ENST00000343483 CDKL5O76039 1030 aa21.7■■□□□ 1.06
HOXA9-201ENST00000343483 LDHBP07195 334 aaKnown RBP21.7■■□□□ 1.06
HOXA9-201ENST00000343483 CDC27P30260 824 aa21.7■■□□□ 1.06
HOXA9-201ENST00000343483 HOXA10P31260 410 aaPredicted RBP21.7■■□□□ 1.06
HOXA9-201ENST00000343483 ATP2B4P23634 1241 aa21.7■■□□□ 1.06
HOXA9-201ENST00000343483 CEBPZQ03701 1054 aaKnown RBP21.7■■□□□ 1.06
HOXA9-201ENST00000343483 WTAPQ15007 396 aa21.7■■□□□ 1.06
HOXA9-201ENST00000343483 CPLX2Q6PUV4 134 aaKnown RBP21.7■■□□□ 1.06
HOXA9-201ENST00000343483 SYNE3Q6ZMZ3 975 aa21.7■■□□□ 1.06
HOXA9-201ENST00000343483 ESR2Q92731 530 aa21.7■■□□□ 1.06
HOXA9-201ENST00000343483 UBAC1Q9BSL1 405 aa21.7■■□□□ 1.06
HOXA9-201ENST00000343483 GIMAP6Q6P9H5 292 aa21.69■■□□□ 1.06
HOXA9-201ENST00000343483 CTR9Q6PD62 1173 aa21.69■■□□□ 1.06
HOXA9-201ENST00000343483 C15orf52Q6ZUT6 534 aaKnown RBP21.69■■□□□ 1.06
HOXA9-201ENST00000343483 NLGN1Q8N2Q7 840 aa21.69■■□□□ 1.06
HOXA9-201ENST00000343483 CRAMP1Q96RY5 1269 aa21.69■■□□□ 1.06
HOXA9-201ENST00000343483 CHD4Q14839 1912 aa21.69■■□□□ 1.06
HOXA9-201ENST00000343483 USP17L12C9JPN9 530 aa21.68■■□□□ 1.06
HOXA9-201ENST00000343483 USP17L21D6R901 530 aa21.68■■□□□ 1.06
HOXA9-201ENST00000343483 ZBTB22O15209 634 aa21.68■■□□□ 1.06
HOXA9-201ENST00000343483 ZSCAN30Q86W11 494 aa21.68■■□□□ 1.06
HOXA9-201ENST00000343483 KLRG2A4D1S0 409 aaPredicted RBP21.68■■□□□ 1.06
HOXA9-201ENST00000343483 HS1BP3Q53T59 392 aa21.68■■□□□ 1.06
HOXA9-201ENST00000343483 TMED8Q6PL24 325 aaPredicted RBP21.68■■□□□ 1.06
HOXA9-201ENST00000343483 FBXO18Q8NFZ0 1043 aa21.68■■□□□ 1.06
HOXA9-201ENST00000343483 PHKBQ93100 1093 aa21.68■■□□□ 1.06
HOXA9-201ENST00000343483 GJB4Q9NTQ9 266 aa21.68■■□□□ 1.06
HOXA9-201ENST00000343483 FTOQ9C0B1 505 aaKnown RBP eCLIP21.67■■□□□ 1.06
HOXA9-201ENST00000343483 DCP1AQ9NPI6 582 aaPredicted RBP21.67■■□□□ 1.06
HOXA9-201ENST00000343483 TAOK2Q9UL54 1235 aa21.67■■□□□ 1.06
HOXA9-201ENST00000343483 PRDM1O75626 825 aa21.67■■□□□ 1.06
HOXA9-201ENST00000343483 PTGER2P43116 358 aa21.67■■□□□ 1.06
HOXA9-201ENST00000343483 CD209Q9NNX6 404 aa21.67■■□□□ 1.06
HOXA9-201ENST00000343483 ATP8A2Q9NTI2 1148 aa21.67■■□□□ 1.06
HOXA9-201ENST00000343483 PPEF1O14829 653 aaPredicted RBP21.66■■□□□ 1.06
HOXA9-201ENST00000343483 ZNF396Q96N95 335 aaPredicted RBP21.66■■□□□ 1.06
HOXA9-201ENST00000343483 MTA3Q9BTC8 594 aa21.66■■□□□ 1.06
HOXA9-201ENST00000343483 MTFR1LQ9H019 292 aa21.66■■□□□ 1.06
HOXA9-201ENST00000343483 FAM217BQ9NTX9 383 aaPredicted RBP21.66■■□□□ 1.06
HOXA9-201ENST00000343483 POLLQ9UGP5 575 aa21.66■■□□□ 1.06
HOXA9-201ENST00000343483 MAST2Q6P0Q8 1798 aa21.66■■□□□ 1.06
HOXA9-201ENST00000343483 C6orf229H3BNL8 230 aa21.65■■□□□ 1.06
HOXA9-201ENST00000343483 RANBP6O60518 1105 aaKnown RBP21.65■■□□□ 1.06
HOXA9-201ENST00000343483 LIG1P18858 919 aa21.65■■□□□ 1.06
HOXA9-201ENST00000343483 DIXDC1Q155Q3 683 aa21.65■■□□□ 1.06
HOXA9-201ENST00000343483 GRIK5Q16478 980 aa21.65■■□□□ 1.06
HOXA9-201ENST00000343483 TMTC2Q8N394 836 aa21.65■■□□□ 1.06
HOXA9-201ENST00000343483 TBC1D16Q8TBP0 767 aa21.65■■□□□ 1.06
HOXA9-201ENST00000343483 AIFM3Q96NN9 605 aa21.65■■□□□ 1.06
HOXA9-201ENST00000343483 ALG1Q9BT22 464 aa21.65■■□□□ 1.06
HOXA9-201ENST00000343483 SPON1Q9HCB6 807 aa21.65■■□□□ 1.06
HOXA9-201ENST00000343483 PODXL2Q9NZ53 605 aa21.65■■□□□ 1.06
HOXA9-201ENST00000343483 TNKSO95271 1327 aa21.65■■□□□ 1.06
HOXA9-201ENST00000343483 IARSP41252 1262 aaKnown RBP21.65■■□□□ 1.06
HOXA9-201ENST00000343483 BICD2Q8TD16 824 aa21.65■■□□□ 1.06
HOXA9-201ENST00000343483 USP28Q96RU2 1077 aa21.65■■□□□ 1.06
HOXA9-201ENST00000343483 GSTO1P78417 241 aa21.64■■□□□ 1.05
HOXA9-201ENST00000343483 EVX2Q03828 476 aa21.64■■□□□ 1.05
HOXA9-201ENST00000343483 NTRK3Q16288 839 aa21.64■■□□□ 1.05
HOXA9-201ENST00000343483 KLHL34Q8N239 644 aa21.64■■□□□ 1.05
HOXA9-201ENST00000343483 FLAD1Q8NFF5 587 aa21.64■■□□□ 1.05
HOXA9-201ENST00000343483 PGBD1Q96JS3 809 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms