RNA–Protein interactions for RNA: ENST00000341594.9

SYNE1-201, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SYNE1, Length 26,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-201ENST00000341594 N4BP1O75113 896 aaKnown RBP3.99□□□□□ -1.77
SYNE1-201ENST00000341594 GUCY2FP51841 1108 aa3.99□□□□□ -1.77
SYNE1-201ENST00000341594 KRT32Q14532 448 aa3.99□□□□□ -1.77
SYNE1-201ENST00000341594 RCSD1Q6JBY9 416 aa3.99□□□□□ -1.77
SYNE1-201ENST00000341594 ALDH8A1Q9H2A2 487 aaPredicted RBP3.99□□□□□ -1.77
SYNE1-201ENST00000341594 LUC7LQ9NQ29 371 aaKnown RBP3.99□□□□□ -1.77
SYNE1-201ENST00000341594 SRGAP2O75044 1071 aa3.99□□□□□ -1.77
SYNE1-201ENST00000341594 APBA1Q02410 837 aa3.99□□□□□ -1.77
SYNE1-201ENST00000341594 CEP128Q6ZU80 1094 aa3.99□□□□□ -1.77
SYNE1-201ENST00000341594 ST5P78524 1137 aa3.99□□□□□ -1.77
SYNE1-201ENST00000341594 TAF7Q15545 349 aaPredicted RBP3.99□□□□□ -1.77
SYNE1-201ENST00000341594 CTNNBL1Q8WYA6 563 aaPredicted RBP3.99□□□□□ -1.77
SYNE1-201ENST00000341594 PHACTR1Q9C0D0 580 aa3.99□□□□□ -1.77
SYNE1-201ENST00000341594 E2F8A0AVK6 867 aa3.99□□□□□ -1.77
SYNE1-201ENST00000341594 MYBP10242 640 aa3.99□□□□□ -1.77
SYNE1-201ENST00000341594 RMDN2Q96LZ7 410 aa3.99□□□□□ -1.77
SYNE1-201ENST00000341594 RUSC2Q8N2Y8 1516 aa3.99□□□□□ -1.77
SYNE1-201ENST00000341594 MPDZO75970 2070 aa3.99□□□□□ -1.77
SYNE1-201ENST00000341594 BICDL2A1A5D9 508 aa3.99□□□□□ -1.77
SYNE1-201ENST00000341594 PRPHP41219 470 aa3.99□□□□□ -1.77
SYNE1-201ENST00000341594 PDCD2Q16342 344 aaPredicted RBP3.99□□□□□ -1.77
SYNE1-201ENST00000341594 JMYQ8N9B5 988 aa3.99□□□□□ -1.77
SYNE1-201ENST00000341594 GOLGA5Q8TBA6 731 aa3.99□□□□□ -1.77
SYNE1-201ENST00000341594 A0A1B0GUL6 1792 aa3.99□□□□□ -1.77
SYNE1-201ENST00000341594 MCCD1P59942 119 aaPredicted RBP3.99□□□□□ -1.77
SYNE1-201ENST00000341594 BIRC2Q13490 618 aa3.99□□□□□ -1.77
SYNE1-201ENST00000341594 PPP2R5BQ15173 497 aa3.99□□□□□ -1.77
SYNE1-201ENST00000341594 KCTD16Q68DU8 428 aa3.99□□□□□ -1.77
SYNE1-201ENST00000341594 IFNLR1Q8IU57 520 aaPredicted RBP3.99□□□□□ -1.77
SYNE1-201ENST00000341594 SHPRHQ149N8 1683 aa3.99□□□□□ -1.77
SYNE1-201ENST00000341594 EZRP15311 586 aaKnown RBP3.99□□□□□ -1.77
SYNE1-201ENST00000341594 ADKP55263 362 aaKnown RBP3.99□□□□□ -1.77
SYNE1-201ENST00000341594 GNG11P61952 73 aa3.99□□□□□ -1.77
SYNE1-201ENST00000341594 SUGP1Q8IWZ8 645 aaKnown RBP3.99□□□□□ -1.77
SYNE1-201ENST00000341594 KANK3Q6NY19 840 aa3.99□□□□□ -1.77
SYNE1-201ENST00000341594 LNPEPQ9UIQ6 1025 aa3.99□□□□□ -1.77
SYNE1-201ENST00000341594 CCDC92Q53HC0 331 aaPredicted RBP3.99□□□□□ -1.77
SYNE1-201ENST00000341594 GBP7Q8N8V2 638 aaPredicted RBP3.99□□□□□ -1.77
SYNE1-201ENST00000341594 LMOD1P29536 600 aaPredicted RBP3.99□□□□□ -1.77
SYNE1-201ENST00000341594 RNF31Q96EP0 1072 aa3.99□□□□□ -1.77
SYNE1-201ENST00000341594 ATP7BP35670 1465 aa3.99□□□□□ -1.77
SYNE1-201ENST00000341594 FOSP01100 380 aaPredicted RBP3.99□□□□□ -1.77
SYNE1-201ENST00000341594 ICE2Q659A1 982 aa3.99□□□□□ -1.77
SYNE1-201ENST00000341594 DTNBP1Q96EV8 351 aa3.99□□□□□ -1.77
SYNE1-201ENST00000341594 ERCC6LQ2NKX8 1250 aa3.99□□□□□ -1.77
SYNE1-201ENST00000341594 ZFYVE9O95405 1425 aa3.99□□□□□ -1.77
SYNE1-201ENST00000341594 DDIT3P35638 169 aa3.99□□□□□ -1.77
SYNE1-201ENST00000341594 PSMD7P51665 324 aa3.99□□□□□ -1.77
SYNE1-201ENST00000341594 SSH1Q8WYL5 1049 aa3.99□□□□□ -1.77
SYNE1-201ENST00000341594 KDM4CQ9H3R0 1056 aa3.99□□□□□ -1.77
SYNE1-201ENST00000341594 PSDA5PKW4 1024 aaPredicted RBP3.99□□□□□ -1.77
SYNE1-201ENST00000341594 TEX13AQ9BXU3 409 aaPredicted RBP3.99□□□□□ -1.77
SYNE1-201ENST00000341594 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.99□□□□□ -1.77
SYNE1-201ENST00000341594 RGPD2P0DJD1 1756 aa3.99□□□□□ -1.77
SYNE1-201ENST00000341594 LINC00854A0A1B0GVQ3 168 aa3.99□□□□□ -1.77
SYNE1-201ENST00000341594 KIF3BO15066 747 aa3.99□□□□□ -1.77
SYNE1-201ENST00000341594 TFRCP02786 760 aaKnown RBP3.99□□□□□ -1.77
SYNE1-201ENST00000341594 CCDC183Q5T5S1 534 aa3.99□□□□□ -1.77
SYNE1-201ENST00000341594 KCNG1Q9UIX4 513 aa3.99□□□□□ -1.77
SYNE1-201ENST00000341594 CCDC160A6NGH7 325 aa3.99□□□□□ -1.77
SYNE1-201ENST00000341594 RAD51AP2Q09MP3 1159 aa3.99□□□□□ -1.77
SYNE1-201ENST00000341594 G2E3Q7L622 706 aa3.99□□□□□ -1.77
SYNE1-201ENST00000341594 GRAMD1CQ8IYS0 662 aa3.99□□□□□ -1.77
SYNE1-201ENST00000341594 EFCAB8A8MWE9 144 aa3.98□□□□□ -1.77
SYNE1-201ENST00000341594 CASP1P29466 404 aa3.98□□□□□ -1.77
SYNE1-201ENST00000341594 MADCAM1Q13477 382 aa3.98□□□□□ -1.77
SYNE1-201ENST00000341594 TMCO3Q6UWJ1 677 aa3.98□□□□□ -1.77
SYNE1-201ENST00000341594 SBNO1A3KN83 1393 aa3.98□□□□□ -1.77
SYNE1-201ENST00000341594 FER1L4A9Z1Z3 1794 aa3.98□□□□□ -1.77
SYNE1-201ENST00000341594 KCNQ3O43525 872 aa3.98□□□□□ -1.77
SYNE1-201ENST00000341594 SLC8A1P32418 973 aa3.98□□□□□ -1.77
SYNE1-201ENST00000341594 SESN3P58005 492 aa3.98□□□□□ -1.77
SYNE1-201ENST00000341594 FTOQ9C0B1 505 aaKnown RBP eCLIP3.98□□□□□ -1.77
SYNE1-201ENST00000341594 SNRNP200O75643 2136 aaKnown RBP3.98□□□□□ -1.77
SYNE1-201ENST00000341594 TRAPPC8Q9Y2L5 1435 aa3.98□□□□□ -1.77
SYNE1-201ENST00000341594 RNF8O76064 485 aa3.98□□□□□ -1.77
SYNE1-201ENST00000341594 TRHP20396 242 aaPredicted RBP3.98□□□□□ -1.77
SYNE1-201ENST00000341594 G3BP1Q13283 466 aaKnown RBP eCLIP3.98□□□□□ -1.77
SYNE1-201ENST00000341594 MXD3Q9BW11 206 aa3.98□□□□□ -1.77
SYNE1-201ENST00000341594 NCOA5Q9HCD5 579 aaKnown RBP3.98□□□□□ -1.77
SYNE1-201ENST00000341594 CACNA1CQ13936 2221 aa3.98□□□□□ -1.77
SYNE1-201ENST00000341594 DIAPH1O60610 1272 aaKnown RBP3.98□□□□□ -1.77
SYNE1-201ENST00000341594 MECOMQ03112 1051 aa3.98□□□□□ -1.77
SYNE1-201ENST00000341594 NAA15Q9BXJ9 866 aaKnown RBP3.98□□□□□ -1.77
SYNE1-201ENST00000341594 GADL1Q6ZQY3 521 aa3.98□□□□□ -1.77
SYNE1-201ENST00000341594 LZTFL1Q9NQ48 299 aa3.98□□□□□ -1.77
SYNE1-201ENST00000341594 COL17A1Q9UMD9 1497 aaPredicted RBP3.98□□□□□ -1.77
SYNE1-201ENST00000341594 GJC1P36383 396 aa3.98□□□□□ -1.77
SYNE1-201ENST00000341594 MTX1Q13505 466 aa3.98□□□□□ -1.77
SYNE1-201ENST00000341594 EIF2S1P05198 315 aaKnown RBP3.98□□□□□ -1.77
SYNE1-201ENST00000341594 MAP2K2P36507 400 aa3.98□□□□□ -1.77
SYNE1-201ENST00000341594 RBM6P78332 1123 aaKnown RBP3.98□□□□□ -1.77
SYNE1-201ENST00000341594 ZKSCAN3Q9BRR0 538 aa3.98□□□□□ -1.77
SYNE1-201ENST00000341594 FAM135BQ49AJ0 1406 aa3.98□□□□□ -1.77
SYNE1-201ENST00000341594 RALGAPA1Q6GYQ0 2036 aa3.98□□□□□ -1.77
SYNE1-201ENST00000341594 PPFIA2O75334 1257 aa3.98□□□□□ -1.77
SYNE1-201ENST00000341594 IRAK4Q9NWZ3 460 aa3.98□□□□□ -1.77
SYNE1-201ENST00000341594 RAB11FIP3O75154 756 aa3.98□□□□□ -1.77
SYNE1-201ENST00000341594 ATP6V1AP38606 617 aa3.98□□□□□ -1.77
SYNE1-201ENST00000341594 ZNF280CQ8ND82 737 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms