RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 SPINK5Q9NQ38 1064 aaPredicted RBP20.63■□□□□ 0.89
NECTIN1-202ENST00000340882 ZHX2Q9Y6X8 837 aa20.63■□□□□ 0.89
NECTIN1-202ENST00000340882 DOCK1Q14185 1865 aa20.62■□□□□ 0.89
NECTIN1-202ENST00000340882 DDX60LQ5H9U9 1706 aaKnown RBP20.62■□□□□ 0.89
NECTIN1-202ENST00000340882 BMP8BP34820 402 aa20.62■□□□□ 0.89
NECTIN1-202ENST00000340882 IRF5Q13568 498 aa20.62■□□□□ 0.89
NECTIN1-202ENST00000340882 RABL6Q3YEC7 729 aaPredicted RBP20.62■□□□□ 0.89
NECTIN1-202ENST00000340882 GADL1Q6ZQY3 521 aa20.62■□□□□ 0.89
NECTIN1-202ENST00000340882 C7orf61Q8IZ16 206 aa20.62■□□□□ 0.89
NECTIN1-202ENST00000340882 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.62■□□□□ 0.89
NECTIN1-202ENST00000340882 TAOK2Q9UL54 1235 aa20.62■□□□□ 0.89
NECTIN1-202ENST00000340882 MYH2Q9UKX2 1941 aa20.62■□□□□ 0.89
NECTIN1-202ENST00000340882 UTYO14607 1347 aa20.61■□□□□ 0.89
NECTIN1-202ENST00000340882 TNPO2O14787 897 aaKnown RBP20.61■□□□□ 0.89
NECTIN1-202ENST00000340882 PTPRAP18433 802 aa20.61■□□□□ 0.89
NECTIN1-202ENST00000340882 SALL2Q9Y467 1007 aaPredicted RBP20.61■□□□□ 0.89
NECTIN1-202ENST00000340882 AFG3L2Q9Y4W6 797 aa20.61■□□□□ 0.89
NECTIN1-202ENST00000340882 PLXNB2O15031 1838 aa20.6■□□□□ 0.89
NECTIN1-202ENST00000340882 PRDX5P30044 214 aa20.6■□□□□ 0.89
NECTIN1-202ENST00000340882 FASTKD5Q7L8L6 764 aaKnown RBP20.6■□□□□ 0.89
NECTIN1-202ENST00000340882 CCDC84Q86UT8 332 aaPredicted RBP20.6■□□□□ 0.89
NECTIN1-202ENST00000340882 SCYL3Q8IZE3 742 aa20.6■□□□□ 0.89
NECTIN1-202ENST00000340882 SYN1P17600 705 aa20.59■□□□□ 0.89
NECTIN1-202ENST00000340882 SH3BP5LQ7L8J4 393 aa20.59■□□□□ 0.89
NECTIN1-202ENST00000340882 NECAB2Q7Z6G3 386 aa20.59■□□□□ 0.89
NECTIN1-202ENST00000340882 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.59■□□□□ 0.89
NECTIN1-202ENST00000340882 USP40Q9NVE5 1235 aa20.59■□□□□ 0.89
NECTIN1-202ENST00000340882 MTMR10Q9NXD2 777 aa20.59■□□□□ 0.89
NECTIN1-202ENST00000340882 TRIM32Q13049 653 aa20.58■□□□□ 0.89
NECTIN1-202ENST00000340882 GPR153Q6NV75 609 aa20.58■□□□□ 0.89
NECTIN1-202ENST00000340882 ANKRD13CQ8N6S4 541 aa20.58■□□□□ 0.89
NECTIN1-202ENST00000340882 WDR66Q8TBY9 1149 aa20.58■□□□□ 0.89
NECTIN1-202ENST00000340882 STXBP5LQ9Y2K9 1186 aa20.58■□□□□ 0.89
NECTIN1-202ENST00000340882 KIF16BQ96L93 1317 aa20.57■□□□□ 0.88
NECTIN1-202ENST00000340882 PUM3Q15397 648 aaKnown RBP20.57■□□□□ 0.88
NECTIN1-202ENST00000340882 SLC45A1Q9Y2W3 748 aa20.57■□□□□ 0.88
NECTIN1-202ENST00000340882 LAMA2P24043 3122 aaKnown RBP20.56■□□□□ 0.88
NECTIN1-202ENST00000340882 IFIT1P09914 478 aaKnown RBP20.56■□□□□ 0.88
NECTIN1-202ENST00000340882 MAGEA10P43363 369 aaPredicted RBP20.56■□□□□ 0.88
NECTIN1-202ENST00000340882 RGS3P49796 1198 aa20.56■□□□□ 0.88
NECTIN1-202ENST00000340882 LRIT3Q3SXY7 679 aa20.56■□□□□ 0.88
NECTIN1-202ENST00000340882 TREML2Q5T2D2 321 aa20.56■□□□□ 0.88
NECTIN1-202ENST00000340882 SMCR8Q8TEV9 937 aaPredicted RBP20.56■□□□□ 0.88
NECTIN1-202ENST00000340882 COL25A1Q9BXS0 654 aaPredicted RBP20.56■□□□□ 0.88
NECTIN1-202ENST00000340882 PICK1Q9NRD5 415 aa20.56■□□□□ 0.88
NECTIN1-202ENST00000340882 TRIM75PA6NK02 468 aa20.55■□□□□ 0.88
NECTIN1-202ENST00000340882 CAPN2P17655 700 aa20.55■□□□□ 0.88
NECTIN1-202ENST00000340882 NCBP3Q53F19 620 aaKnown RBP20.55■□□□□ 0.88
NECTIN1-202ENST00000340882 WDR63Q8IWG1 891 aa20.55■□□□□ 0.88
NECTIN1-202ENST00000340882 LOC285556D6RIA3 1793 aa20.54■□□□□ 0.88
NECTIN1-202ENST00000340882 DDTLA6NHG4 134 aaPredicted RBP20.54■□□□□ 0.88
NECTIN1-202ENST00000340882 MAP3K10Q02779 954 aa20.54■□□□□ 0.88
NECTIN1-202ENST00000340882 COA7Q96BR5 231 aa20.54■□□□□ 0.88
NECTIN1-202ENST00000340882 ATAD5Q96QE3 1844 aa20.54■□□□□ 0.88
NECTIN1-202ENST00000340882 RFX7Q2KHR2 1363 aa20.54■□□□□ 0.88
NECTIN1-202ENST00000340882 ZEB1P37275 1124 aaPredicted RBP20.53■□□□□ 0.88
NECTIN1-202ENST00000340882 RFX5P48382 616 aaPredicted RBP20.53■□□□□ 0.88
NECTIN1-202ENST00000340882 TDHQ8IZJ6 230 aa20.53■□□□□ 0.88
NECTIN1-202ENST00000340882 ANKLE1Q8NAG6 615 aa20.53■□□□□ 0.88
NECTIN1-202ENST00000340882 DDX4Q9NQI0 724 aaKnown RBP20.53■□□□□ 0.88
NECTIN1-202ENST00000340882 GJD2Q9UKL4 321 aa20.53■□□□□ 0.88
NECTIN1-202ENST00000340882 AGTPBP1Q9UPW5 1226 aa20.53■□□□□ 0.88
NECTIN1-202ENST00000340882 EYSQ5T1H1 3165 aa20.52■□□□□ 0.88
NECTIN1-202ENST00000340882 LDHBP07195 334 aaKnown RBP20.52■□□□□ 0.88
NECTIN1-202ENST00000340882 SLC5A1P13866 664 aa20.52■□□□□ 0.88
NECTIN1-202ENST00000340882 LPIN2Q92539 896 aa20.52■□□□□ 0.88
NECTIN1-202ENST00000340882 IDI2Q9BXS1 227 aa20.52■□□□□ 0.88
NECTIN1-202ENST00000340882 NBPF3Q9H094 633 aa20.52■□□□□ 0.88
NECTIN1-202ENST00000340882 VCANP13611 3396 aa20.51■□□□□ 0.87
NECTIN1-202ENST00000340882 ENTPD3O75355 529 aa20.51■□□□□ 0.87
NECTIN1-202ENST00000340882 HMGCRP04035 888 aa20.51■□□□□ 0.87
NECTIN1-202ENST00000340882 FAM110CQ1W6H9 321 aa20.51■□□□□ 0.87
NECTIN1-202ENST00000340882 ATG9AQ7Z3C6 839 aa20.51■□□□□ 0.87
NECTIN1-202ENST00000340882 C11orf49Q9H6J7 331 aa20.51■□□□□ 0.87
NECTIN1-202ENST00000340882 LRRFIP2Q9Y608 721 aaKnown RBP20.51■□□□□ 0.87
NECTIN1-202ENST00000340882 PFASO15067 1338 aa20.51■□□□□ 0.87
NECTIN1-202ENST00000340882 DNAH12Q6ZR08 3092 aa20.5■□□□□ 0.87
NECTIN1-202ENST00000340882 EYA2O00167 538 aa20.5■□□□□ 0.87
NECTIN1-202ENST00000340882 CTNND1O60716 968 aaKnown RBP20.5■□□□□ 0.87
NECTIN1-202ENST00000340882 ZSCAN29Q8IWY8 852 aaPredicted RBP20.5■□□□□ 0.87
NECTIN1-202ENST00000340882 RPTORQ8N122 1335 aa20.5■□□□□ 0.87
NECTIN1-202ENST00000340882 FAM196BA6NMK8 535 aa20.49■□□□□ 0.87
NECTIN1-202ENST00000340882 UBE2OQ9C0C9 1292 aaKnown RBP20.49■□□□□ 0.87
NECTIN1-202ENST00000340882 USP44Q9H0E7 712 aa20.49■□□□□ 0.87
NECTIN1-202ENST00000340882 HMX1Q9NP08 348 aaPredicted RBP20.49■□□□□ 0.87
NECTIN1-202ENST00000340882 OGDHLQ9ULD0 1010 aa20.49■□□□□ 0.87
NECTIN1-202ENST00000340882 GAKO14976 1311 aa20.49■□□□□ 0.87
NECTIN1-202ENST00000340882 SALL1Q9NSC2 1324 aa20.49■□□□□ 0.87
NECTIN1-202ENST00000340882 PHKA1P46020 1223 aa20.48■□□□□ 0.87
NECTIN1-202ENST00000340882 TRIB2Q92519 343 aa20.48■□□□□ 0.87
NECTIN1-202ENST00000340882 PEX10O60683 326 aa20.47■□□□□ 0.87
NECTIN1-202ENST00000340882 PICALMQ13492 652 aa20.47■□□□□ 0.87
NECTIN1-202ENST00000340882 FRMPD3Q5JV73 1810 aa20.46■□□□□ 0.87
NECTIN1-202ENST00000340882 SPP2Q13103 211 aa20.46■□□□□ 0.87
NECTIN1-202ENST00000340882 RRP1BQ14684 758 aaKnown RBP20.46■□□□□ 0.87
NECTIN1-202ENST00000340882 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.46■□□□□ 0.87
NECTIN1-202ENST00000340882 GUCD1Q96NT3 240 aa20.46■□□□□ 0.87
NECTIN1-202ENST00000340882 ATP2B3Q16720 1220 aa20.45■□□□□ 0.86
NECTIN1-202ENST00000340882 MAP3K21Q5TCX8 1036 aa20.45■□□□□ 0.86
NECTIN1-202ENST00000340882 PROCA1Q8NCQ7 364 aaPredicted RBP20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms