RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 ANAPC4Q9UJX5 808 aa26.3■■□□□ 1.8
PDLIM2-203ENST00000339162 CCDC88AQ3V6T2 1871 aa26.29■■□□□ 1.8
PDLIM2-203ENST00000339162 GOLGA6L3A6NEY3 463 aa26.29■■□□□ 1.8
PDLIM2-203ENST00000339162 DEFB132Q7Z7B7 95 aa26.29■■□□□ 1.8
PDLIM2-203ENST00000339162 METAP2P50579 478 aaKnown RBP eCLIP26.29■■□□□ 1.8
PDLIM2-203ENST00000339162 GAS2L3Q86XJ1 694 aa26.29■■□□□ 1.8
PDLIM2-203ENST00000339162 MPNDQ8N594 471 aa26.29■■□□□ 1.8
PDLIM2-203ENST00000339162 DHX16O60231 1041 aaKnown RBP26.28■■□□□ 1.8
PDLIM2-203ENST00000339162 CYP2D6P10635 497 aa26.28■■□□□ 1.8
PDLIM2-203ENST00000339162 TMEM87AQ8NBN3 555 aa26.28■■□□□ 1.8
PDLIM2-203ENST00000339162 TMEM63CQ9P1W3 806 aa26.28■■□□□ 1.8
PDLIM2-203ENST00000339162 COL11A2P13942 1736 aaPredicted RBP26.28■■□□□ 1.8
PDLIM2-203ENST00000339162 CDC27P30260 824 aa26.27■■□□□ 1.8
PDLIM2-203ENST00000339162 MFSD14BQ5SR56 506 aa26.27■■□□□ 1.8
PDLIM2-203ENST00000339162 C2CD5Q86YS7 1000 aa26.27■■□□□ 1.8
PDLIM2-203ENST00000339162 SH3RF3Q8TEJ3 882 aaPredicted RBP26.27■■□□□ 1.8
PDLIM2-203ENST00000339162 FBXO41Q8TF61 875 aa26.27■■□□□ 1.8
PDLIM2-203ENST00000339162 TFIP11Q9UBB9 837 aaKnown RBP26.27■■□□□ 1.8
PDLIM2-203ENST00000339162 LRRC37AA6NMS7 1700 aa26.27■■□□□ 1.8
PDLIM2-203ENST00000339162 ZSCAN23Q3MJ62 389 aa26.27■■□□□ 1.8
PDLIM2-203ENST00000339162 SGMS1Q86VZ5 419 aa26.27■■□□□ 1.8
PDLIM2-203ENST00000339162 RGPD3A6NKT7 1758 aaPredicted RBP26.27■■□□□ 1.8
PDLIM2-203ENST00000339162 MAST2Q6P0Q8 1798 aa26.27■■□□□ 1.8
PDLIM2-203ENST00000339162 RGPD4Q7Z3J3 1758 aa26.27■■□□□ 1.8
PDLIM2-203ENST00000339162 LTBP1Q14766 1721 aa26.26■■□□□ 1.79
PDLIM2-203ENST00000339162 FSD2A1L4K1 749 aa26.26■■□□□ 1.79
PDLIM2-203ENST00000339162 ZBTB43O43298 467 aa26.26■■□□□ 1.79
PDLIM2-203ENST00000339162 MBD3O95983 291 aa26.26■■□□□ 1.79
PDLIM2-203ENST00000339162 GIMAP6Q6P9H5 292 aa26.26■■□□□ 1.79
PDLIM2-203ENST00000339162 DPP8Q6V1X1 898 aaPredicted RBP26.26■■□□□ 1.79
PDLIM2-203ENST00000339162 ZNF219Q9P2Y4 722 aaPredicted RBP26.26■■□□□ 1.79
PDLIM2-203ENST00000339162 TAOK2Q9UL54 1235 aa26.26■■□□□ 1.79
PDLIM2-203ENST00000339162 CCDC69A6NI79 296 aa26.26■■□□□ 1.79
PDLIM2-203ENST00000339162 CHRNA5P30532 468 aa26.26■■□□□ 1.79
PDLIM2-203ENST00000339162 LIFRP42702 1097 aa26.26■■□□□ 1.79
PDLIM2-203ENST00000339162 GTF2IP78347 998 aa26.26■■□□□ 1.79
PDLIM2-203ENST00000339162 RESTQ13127 1097 aa26.26■■□□□ 1.79
PDLIM2-203ENST00000339162 OTUD7BQ6GQQ9 843 aa26.26■■□□□ 1.79
PDLIM2-203ENST00000339162 CHMP4CQ96CF2 233 aa26.26■■□□□ 1.79
PDLIM2-203ENST00000339162 ATP8A2Q9NTI2 1148 aa26.26■■□□□ 1.79
PDLIM2-203ENST00000339162 ORC3Q9UBD5 711 aaPredicted RBP26.26■■□□□ 1.79
PDLIM2-203ENST00000339162 KIF3AQ9Y496 699 aa26.26■■□□□ 1.79
PDLIM2-203ENST00000339162 SLC12A7Q9Y666 1083 aa26.26■■□□□ 1.79
PDLIM2-203ENST00000339162 RANBP6O60518 1105 aaKnown RBP26.25■■□□□ 1.79
PDLIM2-203ENST00000339162 ESR2Q92731 530 aa26.25■■□□□ 1.79
PDLIM2-203ENST00000339162 FBXW7Q969H0 707 aa26.25■■□□□ 1.79
PDLIM2-203ENST00000339162 ZC3H12CQ9C0D7 883 aaKnown RBP26.25■■□□□ 1.79
PDLIM2-203ENST00000339162 GJB4Q9NTQ9 266 aa26.25■■□□□ 1.79
PDLIM2-203ENST00000339162 USP17L8P0C7I0 530 aa26.24■■□□□ 1.79
PDLIM2-203ENST00000339162 KRT85P78386 507 aa26.24■■□□□ 1.79
PDLIM2-203ENST00000339162 WTAPQ15007 396 aa26.24■■□□□ 1.79
PDLIM2-203ENST00000339162 DOK7Q18PE1 504 aa26.24■■□□□ 1.79
PDLIM2-203ENST00000339162 MCM9Q9NXL9 1143 aa26.24■■□□□ 1.79
PDLIM2-203ENST00000339162 GSTO1P78417 241 aa26.24■■□□□ 1.79
PDLIM2-203ENST00000339162 SART3Q15020 963 aaKnown RBP26.24■■□□□ 1.79
PDLIM2-203ENST00000339162 UBAC1Q9BSL1 405 aa26.24■■□□□ 1.79
PDLIM2-203ENST00000339162 ERICH2A1L162 156 aa26.23■■□□□ 1.79
PDLIM2-203ENST00000339162 GOLGA8AA7E2F4 631 aa26.23■■□□□ 1.79
PDLIM2-203ENST00000339162 USP5P45974 858 aa26.23■■□□□ 1.79
PDLIM2-203ENST00000339162 PHKBQ93100 1093 aa26.23■■□□□ 1.79
PDLIM2-203ENST00000339162 H0YIN7 160 aa26.23■■□□□ 1.79
PDLIM2-203ENST00000339162 TTC6Q86TZ1 520 aa26.23■■□□□ 1.79
PDLIM2-203ENST00000339162 FAM217BQ9NTX9 383 aaPredicted RBP26.23■■□□□ 1.79
PDLIM2-203ENST00000339162 MROH7-TTC4A0A0A0MT08 1334 aa26.23■■□□□ 1.79
PDLIM2-203ENST00000339162 DUOX1Q9NRD9 1551 aa26.22■■□□□ 1.79
PDLIM2-203ENST00000339162 TMED8Q6PL24 325 aaPredicted RBP26.22■■□□□ 1.79
PDLIM2-203ENST00000339162 RTFDC1Q9BY42 306 aaPredicted RBP26.22■■□□□ 1.79
PDLIM2-203ENST00000339162 TMX4Q9H1E5 349 aaPredicted RBP26.22■■□□□ 1.79
PDLIM2-203ENST00000339162 TNKSO95271 1327 aa26.22■■□□□ 1.79
PDLIM2-203ENST00000339162 BAG3O95817 575 aa26.22■■□□□ 1.79
PDLIM2-203ENST00000339162 TGFBRAP1Q8WUH2 860 aa26.22■■□□□ 1.79
PDLIM2-203ENST00000339162 BTDP43251 543 aa26.21■■□□□ 1.79
PDLIM2-203ENST00000339162 AIFM3Q96NN9 605 aa26.21■■□□□ 1.79
PDLIM2-203ENST00000339162 NOL10Q9BSC4 688 aaKnown RBP26.21■■□□□ 1.79
PDLIM2-203ENST00000339162 COA1Q9GZY4 146 aa26.21■■□□□ 1.79
PDLIM2-203ENST00000339162 LDHCP07864 332 aa26.2■■□□□ 1.79
PDLIM2-203ENST00000339162 UBE2HP62256 183 aa26.2■■□□□ 1.79
PDLIM2-203ENST00000339162 SF3B2Q13435 895 aaKnown RBP26.2■■□□□ 1.79
PDLIM2-203ENST00000339162 MXD3Q9BW11 206 aa26.2■■□□□ 1.79
PDLIM2-203ENST00000339162 ARPP21Q9UBL0 812 aaPredicted RBP26.2■■□□□ 1.79
PDLIM2-203ENST00000339162 F8W031 263 aaPredicted RBP26.2■■□□□ 1.78
PDLIM2-203ENST00000339162 SYNE3Q6ZMZ3 975 aa26.2■■□□□ 1.78
PDLIM2-203ENST00000339162 C8orf76Q96K31 380 aa26.2■■□□□ 1.78
PDLIM2-203ENST00000339162 ZSCAN16Q9H4T2 348 aaPredicted RBP26.2■■□□□ 1.78
PDLIM2-203ENST00000339162 MKRN1Q9UHC7 482 aaKnown RBP26.2■■□□□ 1.78
PDLIM2-203ENST00000339162 UBE2Q2LH0YL09 131 aa26.19■■□□□ 1.78
PDLIM2-203ENST00000339162 FGRP09769 529 aa26.19■■□□□ 1.78
PDLIM2-203ENST00000339162 FAM47AQ5JRC9 791 aa26.19■■□□□ 1.78
PDLIM2-203ENST00000339162 MYH2Q9UKX2 1941 aa26.19■■□□□ 1.78
PDLIM2-203ENST00000339162 PPP4CP60510 307 aa26.19■■□□□ 1.78
PDLIM2-203ENST00000339162 CEBPZQ03701 1054 aaKnown RBP26.19■■□□□ 1.78
PDLIM2-203ENST00000339162 SEC23AQ15436 765 aa26.19■■□□□ 1.78
PDLIM2-203ENST00000339162 NTRK3Q16288 839 aa26.19■■□□□ 1.78
PDLIM2-203ENST00000339162 MAPKAPK5Q8IW41 473 aa26.19■■□□□ 1.78
PDLIM2-203ENST00000339162 TBC1D22AQ8WUA7 517 aa26.19■■□□□ 1.78
PDLIM2-203ENST00000339162 NUP133Q8WUM0 1156 aa26.19■■□□□ 1.78
PDLIM2-203ENST00000339162 ZSCAN10Q96SZ4 725 aaPredicted RBP26.19■■□□□ 1.78
PDLIM2-203ENST00000339162 SYCE3A1L190 88 aa26.18■■□□□ 1.78
PDLIM2-203ENST00000339162 XRCC6P12956 609 aaKnown RBP eCLIP26.18■■□□□ 1.78
PDLIM2-203ENST00000339162 BAG6P46379 1132 aa26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms