RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 C1QTNF8P60827 252 aa14.3□□□□□ -0.12
SPTLC1-202ENST00000337841 MAPKAPK5Q8IW41 473 aa14.3□□□□□ -0.12
SPTLC1-202ENST00000337841 LCORLQ8N3X6 602 aa14.3□□□□□ -0.12
SPTLC1-202ENST00000337841 C2orf69Q8N8R5 385 aa14.3□□□□□ -0.12
SPTLC1-202ENST00000337841 RUFY2Q8WXA3 655 aa14.3□□□□□ -0.12
SPTLC1-202ENST00000337841 TMEM39BQ9GZU3 492 aa14.3□□□□□ -0.12
SPTLC1-202ENST00000337841 DHX36Q9H2U1 1008 aaKnown RBP14.3□□□□□ -0.12
SPTLC1-202ENST00000337841 ZNF408Q9H9D4 720 aa14.3□□□□□ -0.12
SPTLC1-202ENST00000337841 ATP8A2Q9NTI2 1148 aa14.3□□□□□ -0.12
SPTLC1-202ENST00000337841 SLC4A4Q9Y6R1 1079 aa14.3□□□□□ -0.12
SPTLC1-202ENST00000337841 MYH13Q9UKX3 1938 aa14.3□□□□□ -0.12
SPTLC1-202ENST00000337841 RFX7Q2KHR2 1363 aa14.3□□□□□ -0.12
SPTLC1-202ENST00000337841 GPAA1O43292 621 aa14.29□□□□□ -0.12
SPTLC1-202ENST00000337841 PPP1R12BO60237 982 aaPredicted RBP14.29□□□□□ -0.12
SPTLC1-202ENST00000337841 CELF2O95319 508 aaKnown RBP14.29□□□□□ -0.12
SPTLC1-202ENST00000337841 APPP05067 770 aa14.29□□□□□ -0.12
SPTLC1-202ENST00000337841 NMIQ13287 307 aaPredicted RBP14.29□□□□□ -0.12
SPTLC1-202ENST00000337841 NBPF12Q5TAG4 269 aaPredicted RBP14.29□□□□□ -0.12
SPTLC1-202ENST00000337841 DLK2Q6UY11 383 aa14.29□□□□□ -0.12
SPTLC1-202ENST00000337841 ZFPM1Q8IX07 1006 aa14.29□□□□□ -0.12
SPTLC1-202ENST00000337841 SEC62Q99442 399 aaKnown RBP14.29□□□□□ -0.12
SPTLC1-202ENST00000337841 OSBPL5Q9H0X9 879 aaPredicted RBP14.29□□□□□ -0.12
SPTLC1-202ENST00000337841 DDX4Q9NQI0 724 aaKnown RBP14.29□□□□□ -0.12
SPTLC1-202ENST00000337841 PASKQ96RG2 1323 aa14.29□□□□□ -0.12
SPTLC1-202ENST00000337841 PATL2C9JE40 543 aaKnown RBP14.28□□□□□ -0.12
SPTLC1-202ENST00000337841 M0R2C6 588 aa14.28□□□□□ -0.12
SPTLC1-202ENST00000337841 CNTNAP1P78357 1384 aa14.28□□□□□ -0.12
SPTLC1-202ENST00000337841 FMR1Q06787 632 aaKnown RBP eCLIP14.28□□□□□ -0.12
SPTLC1-202ENST00000337841 TTLL12Q14166 644 aaPredicted RBP14.28□□□□□ -0.12
SPTLC1-202ENST00000337841 CASC1Q6TDU7 716 aa14.28□□□□□ -0.12
SPTLC1-202ENST00000337841 CWC27Q6UX04 472 aaKnown RBP14.28□□□□□ -0.12
SPTLC1-202ENST00000337841 TTC6Q86TZ1 520 aa14.28□□□□□ -0.12
SPTLC1-202ENST00000337841 FOXP4Q8IVH2 680 aaPredicted RBP14.28□□□□□ -0.12
SPTLC1-202ENST00000337841 AMOTL1Q8IY63 956 aa14.28□□□□□ -0.12
SPTLC1-202ENST00000337841 FAM227BQ96M60 508 aa14.28□□□□□ -0.12
SPTLC1-202ENST00000337841 TEPSINQ96N21 525 aa14.28□□□□□ -0.12
SPTLC1-202ENST00000337841 NACAP1Q9BZK3 213 aa14.28□□□□□ -0.12
SPTLC1-202ENST00000337841 TMEM88BA6NKF7 163 aa14.27□□□□□ -0.13
SPTLC1-202ENST00000337841 PRKAB2O43741 272 aa14.27□□□□□ -0.13
SPTLC1-202ENST00000337841 POLR3DP05423 398 aaPredicted RBP14.27□□□□□ -0.13
SPTLC1-202ENST00000337841 HLA-DOAP06340 250 aa14.27□□□□□ -0.13
SPTLC1-202ENST00000337841 CHMLP26374 656 aa14.27□□□□□ -0.13
SPTLC1-202ENST00000337841 APLP1P51693 650 aa14.27□□□□□ -0.13
SPTLC1-202ENST00000337841 FKBP1BP68106 108 aa14.27□□□□□ -0.13
SPTLC1-202ENST00000337841 DCAF15Q66K64 600 aa14.27□□□□□ -0.13
SPTLC1-202ENST00000337841 GIMAP6Q6P9H5 292 aa14.27□□□□□ -0.13
SPTLC1-202ENST00000337841 ARMC9Q7Z3E5 817 aa14.27□□□□□ -0.13
SPTLC1-202ENST00000337841 CSRNP1Q96S65 589 aa14.27□□□□□ -0.13
SPTLC1-202ENST00000337841 GBA2Q9HCG7 927 aaPredicted RBP14.27□□□□□ -0.13
SPTLC1-202ENST00000337841 PI4KBQ9UBF8 816 aa14.27□□□□□ -0.13
SPTLC1-202ENST00000337841 RPAP1Q9BWH6 1393 aaPredicted RBP14.26□□□□□ -0.13
SPTLC1-202ENST00000337841 FLT1P17948 1338 aa14.26□□□□□ -0.13
SPTLC1-202ENST00000337841 A0A0D9SFI3 127 aa14.26□□□□□ -0.13
SPTLC1-202ENST00000337841 DDTLA6NHG4 134 aaPredicted RBP14.26□□□□□ -0.13
SPTLC1-202ENST00000337841 CST9Q5W186 159 aa14.26□□□□□ -0.13
SPTLC1-202ENST00000337841 SDR42E1Q8WUS8 393 aa14.26□□□□□ -0.13
SPTLC1-202ENST00000337841 DCP1AQ9NPI6 582 aaPredicted RBP14.26□□□□□ -0.13
SPTLC1-202ENST00000337841 MCM9Q9NXL9 1143 aa14.26□□□□□ -0.13
SPTLC1-202ENST00000337841 SAP30BPQ9UHR5 308 aaKnown RBP14.26□□□□□ -0.13
SPTLC1-202ENST00000337841 PALD1Q9ULE6 856 aa14.26□□□□□ -0.13
SPTLC1-202ENST00000337841 ADAMTSL1Q8N6G6 1762 aa14.25□□□□□ -0.13
SPTLC1-202ENST00000337841 GSG1L2A8MUP6 293 aa14.25□□□□□ -0.13
SPTLC1-202ENST00000337841 IREB2P48200 963 aaKnown RBP14.25□□□□□ -0.13
SPTLC1-202ENST00000337841 PRKG1Q13976 671 aa14.25□□□□□ -0.13
SPTLC1-202ENST00000337841 CCDC129Q6ZRS4 1044 aa14.25□□□□□ -0.13
SPTLC1-202ENST00000337841 SH3BP5LQ7L8J4 393 aa14.25□□□□□ -0.13
SPTLC1-202ENST00000337841 TRIM34Q9BYJ4 488 aa14.25□□□□□ -0.13
SPTLC1-202ENST00000337841 MKRN1Q9UHC7 482 aaKnown RBP14.25□□□□□ -0.13
SPTLC1-202ENST00000337841 MYH2Q9UKX2 1941 aa14.25□□□□□ -0.13
SPTLC1-202ENST00000337841 CCDC171Q6TFL3 1326 aa14.24□□□□□ -0.13
SPTLC1-202ENST00000337841 USP17L12C9JPN9 530 aa14.24□□□□□ -0.13
SPTLC1-202ENST00000337841 USP17L21D6R901 530 aa14.24□□□□□ -0.13
SPTLC1-202ENST00000337841 TBC1D12O60347 775 aa14.24□□□□□ -0.13
SPTLC1-202ENST00000337841 CDC45O75419 566 aa14.24□□□□□ -0.13
SPTLC1-202ENST00000337841 USP2O75604 605 aaPredicted RBP14.24□□□□□ -0.13
SPTLC1-202ENST00000337841 TDO2P48775 406 aa14.24□□□□□ -0.13
SPTLC1-202ENST00000337841 MIGA2Q7L4E1 593 aa14.24□□□□□ -0.13
SPTLC1-202ENST00000337841 IFNL3Q8IZI9 196 aa14.24□□□□□ -0.13
SPTLC1-202ENST00000337841 CRACR2BQ8N4Y2 399 aaPredicted RBP14.24□□□□□ -0.13
SPTLC1-202ENST00000337841 ZNF341Q9BYN7 854 aa14.24□□□□□ -0.13
SPTLC1-202ENST00000337841 CREBZFQ9NS37 354 aa14.24□□□□□ -0.13
SPTLC1-202ENST00000337841 ABT1Q9ULW3 272 aaKnown RBP14.24□□□□□ -0.13
SPTLC1-202ENST00000337841 ANGEL1Q9UNK9 670 aaKnown RBP14.24□□□□□ -0.13
SPTLC1-202ENST00000337841 ATRNL1Q5VV63 1379 aa14.23□□□□□ -0.13
SPTLC1-202ENST00000337841 RAD50Q92878 1312 aa14.23□□□□□ -0.13
SPTLC1-202ENST00000337841 UNCXA6NJT0 531 aa14.23□□□□□ -0.13
SPTLC1-202ENST00000337841 UBE2Q2LH0YL09 131 aa14.23□□□□□ -0.13
SPTLC1-202ENST00000337841 HSPA6P17066 643 aa14.23□□□□□ -0.13
SPTLC1-202ENST00000337841 MAP3K9P80192 1104 aa14.23□□□□□ -0.13
SPTLC1-202ENST00000337841 MAP3K10Q02779 954 aa14.23□□□□□ -0.13
SPTLC1-202ENST00000337841 ALX1Q15699 326 aa14.23□□□□□ -0.13
SPTLC1-202ENST00000337841 SBK1Q52WX2 424 aa14.23□□□□□ -0.13
SPTLC1-202ENST00000337841 KIAA1211Q6ZU35 1233 aa14.23□□□□□ -0.13
SPTLC1-202ENST00000337841 CDAN1Q8IWY9 1227 aa14.23□□□□□ -0.13
SPTLC1-202ENST00000337841 NAPBQ9H115 298 aa14.23□□□□□ -0.13
SPTLC1-202ENST00000337841 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.23□□□□□ -0.133e-6■■■■■ 31.2
SPTLC1-202ENST00000337841 HERC5Q9UII4 1024 aaKnown RBP14.23□□□□□ -0.13
SPTLC1-202ENST00000337841 TAOK2Q9UL54 1235 aa14.23□□□□□ -0.13
SPTLC1-202ENST00000337841 MINDY4BA8MYZ0 360 aa14.22□□□□□ -0.13
SPTLC1-202ENST00000337841 HSPD1P10809 573 aaKnown RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms