RNA–Protein interactions for RNA: ENST00000331450.9

LRRC28-202, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-202ENST00000331450 HIP1O00291 1037 aa19.31■□□□□ 0.68
LRRC28-202ENST00000331450 GPAA1O43292 621 aa19.31■□□□□ 0.68
LRRC28-202ENST00000331450 TNNI2P48788 182 aa19.31■□□□□ 0.68
LRRC28-202ENST00000331450 DLK2Q6UY11 383 aa19.31■□□□□ 0.68
LRRC28-202ENST00000331450 FAM151AQ8WW52 585 aa19.31■□□□□ 0.68
LRRC28-202ENST00000331450 AIDAQ96BJ3 306 aa19.31■□□□□ 0.68
LRRC28-202ENST00000331450 STRBPQ96SI9 672 aaKnown RBP19.31■□□□□ 0.68
LRRC28-202ENST00000331450 MKRN1Q9UHC7 482 aaKnown RBP19.31■□□□□ 0.68
LRRC28-202ENST00000331450 TRAF5O00463 557 aa19.3■□□□□ 0.68
LRRC28-202ENST00000331450 CHMLP26374 656 aa19.3■□□□□ 0.68
LRRC28-202ENST00000331450 ZFPM1Q8IX07 1006 aa19.3■□□□□ 0.68
LRRC28-202ENST00000331450 TGFBRAP1Q8WUH2 860 aa19.3■□□□□ 0.68
LRRC28-202ENST00000331450 CDCA5Q96FF9 252 aa19.3■□□□□ 0.68
LRRC28-202ENST00000331450 CRNKL1Q9BZJ0 848 aaKnown RBP19.3■□□□□ 0.68
LRRC28-202ENST00000331450 TMEM39BQ9GZU3 492 aa19.3■□□□□ 0.68
LRRC28-202ENST00000331450 DIAPH3Q9NSV4 1193 aa19.3■□□□□ 0.68
LRRC28-202ENST00000331450 FMR1Q06787 632 aaKnown RBP eCLIP19.29■□□□□ 0.68
LRRC28-202ENST00000331450 TCP10Q12799 353 aa19.29■□□□□ 0.68
LRRC28-202ENST00000331450 PICALMQ13492 652 aa19.29■□□□□ 0.68
LRRC28-202ENST00000331450 CDAN1Q8IWY9 1227 aa19.29■□□□□ 0.68
LRRC28-202ENST00000331450 OSBPL5Q9H0X9 879 aaPredicted RBP19.29■□□□□ 0.68
LRRC28-202ENST00000331450 MYH8P13535 1937 aa19.28■□□□□ 0.68
LRRC28-202ENST00000331450 PRKAB2O43741 272 aa19.28■□□□□ 0.68
LRRC28-202ENST00000331450 MCMDC2Q4G0Z9 681 aa19.28■□□□□ 0.68
LRRC28-202ENST00000331450 CCDC129Q6ZRS4 1044 aa19.28■□□□□ 0.68
LRRC28-202ENST00000331450 SH3BP5LQ7L8J4 393 aa19.28■□□□□ 0.68
LRRC28-202ENST00000331450 ZNF589Q86UQ0 364 aaPredicted RBP19.28■□□□□ 0.68
LRRC28-202ENST00000331450 MAPKAPK5Q8IW41 473 aa19.28■□□□□ 0.68
LRRC28-202ENST00000331450 SDR42E1Q8WUS8 393 aa19.28■□□□□ 0.68
LRRC28-202ENST00000331450 IL25Q9H293 177 aa19.28■□□□□ 0.68
LRRC28-202ENST00000331450 RAD50Q92878 1312 aa19.27■□□□□ 0.68
LRRC28-202ENST00000331450 FOXP2O15409 715 aa19.27■□□□□ 0.68
LRRC28-202ENST00000331450 PRAMEF18Q5VWM3 479 aa19.27■□□□□ 0.68
LRRC28-202ENST00000331450 CWC27Q6UX04 472 aaKnown RBP19.27■□□□□ 0.68
LRRC28-202ENST00000331450 DCP1AQ9NPI6 582 aaPredicted RBP19.27■□□□□ 0.68
LRRC28-202ENST00000331450 ATP8A2Q9NTI2 1148 aa19.27■□□□□ 0.68
LRRC28-202ENST00000331450 ATAD5Q96QE3 1844 aa19.27■□□□□ 0.68
LRRC28-202ENST00000331450 CCDC171Q6TFL3 1326 aa19.26■□□□□ 0.67
LRRC28-202ENST00000331450 DDTLA6NHG4 134 aaPredicted RBP19.26■□□□□ 0.67
LRRC28-202ENST00000331450 GSG1L2A8MUP6 293 aa19.26■□□□□ 0.67
LRRC28-202ENST00000331450 GNAT2P19087 354 aa19.26■□□□□ 0.67
LRRC28-202ENST00000331450 USP5P45974 858 aa19.26■□□□□ 0.67
LRRC28-202ENST00000331450 NBPF12Q5TAG4 269 aaPredicted RBP19.26■□□□□ 0.67
LRRC28-202ENST00000331450 SLC4A4Q9Y6R1 1079 aa19.26■□□□□ 0.67
LRRC28-202ENST00000331450 EPB41L4AQ9HCS5 686 aaPredicted RBP19.25■□□□□ 0.67
LRRC28-202ENST00000331450 DOCK1Q14185 1865 aa19.24■□□□□ 0.67
LRRC28-202ENST00000331450 CDC45O75419 566 aa19.24■□□□□ 0.67
LRRC28-202ENST00000331450 CST9Q5W186 159 aa19.24■□□□□ 0.67
LRRC28-202ENST00000331450 GIMAP6Q6P9H5 292 aa19.24■□□□□ 0.67
LRRC28-202ENST00000331450 SGSM2O43147 1006 aa19.23■□□□□ 0.67
LRRC28-202ENST00000331450 SUPT20HL1Q3ZLR7 823 aa19.23■□□□□ 0.67
LRRC28-202ENST00000331450 VPS53Q5VIR6 699 aa19.23■□□□□ 0.67
LRRC28-202ENST00000331450 RUFY2Q8WXA3 655 aa19.23■□□□□ 0.67
LRRC28-202ENST00000331450 CSRNP1Q96S65 589 aa19.23■□□□□ 0.67
LRRC28-202ENST00000331450 DHX36Q9H2U1 1008 aaKnown RBP19.23■□□□□ 0.67
LRRC28-202ENST00000331450 PALD1Q9ULE6 856 aa19.23■□□□□ 0.67
LRRC28-202ENST00000331450 PATL2C9JE40 543 aaKnown RBP19.22■□□□□ 0.67
LRRC28-202ENST00000331450 CELF2O95319 508 aaKnown RBP19.22■□□□□ 0.67
LRRC28-202ENST00000331450 MFAP1P55081 439 aaKnown RBP19.22■□□□□ 0.67
LRRC28-202ENST00000331450 MAP3K10Q02779 954 aa19.22■□□□□ 0.67
LRRC28-202ENST00000331450 ZSCAN29Q8IWY8 852 aaPredicted RBP19.22■□□□□ 0.67
LRRC28-202ENST00000331450 SAP30BPQ9UHR5 308 aaKnown RBP19.22■□□□□ 0.67
LRRC28-202ENST00000331450 ZMYM6O95789 1325 aa19.22■□□□□ 0.67
LRRC28-202ENST00000331450 HSPD1P10809 573 aaKnown RBP19.21■□□□□ 0.67
LRRC28-202ENST00000331450 NF2P35240 595 aa19.21■□□□□ 0.67
LRRC28-202ENST00000331450 METTL16Q86W50 562 aaKnown RBP19.21■□□□□ 0.67
LRRC28-202ENST00000331450 IFNL3Q8IZI9 196 aa19.21■□□□□ 0.67
LRRC28-202ENST00000331450 HOOK2Q96ED9 719 aa19.21■□□□□ 0.67
LRRC28-202ENST00000331450 ESYT1Q9BSJ8 1104 aa19.21■□□□□ 0.67
LRRC28-202ENST00000331450 MCM9Q9NXL9 1143 aa19.21■□□□□ 0.67
LRRC28-202ENST00000331450 ROBO3Q96MS0 1386 aa19.2■□□□□ 0.66
LRRC28-202ENST00000331450 C1QTNF8P60827 252 aa19.2■□□□□ 0.66
LRRC28-202ENST00000331450 EVX2Q03828 476 aa19.2■□□□□ 0.66
LRRC28-202ENST00000331450 ALX1Q15699 326 aa19.2■□□□□ 0.66
LRRC28-202ENST00000331450 MAP3K11Q16584 847 aa19.2■□□□□ 0.66
LRRC28-202ENST00000331450 SBK1Q52WX2 424 aa19.2■□□□□ 0.66
LRRC28-202ENST00000331450 CTR9Q6PD62 1173 aa19.2■□□□□ 0.66
LRRC28-202ENST00000331450 EHD4Q9H223 541 aa19.2■□□□□ 0.66
LRRC28-202ENST00000331450 ZNF408Q9H9D4 720 aa19.2■□□□□ 0.66
LRRC28-202ENST00000331450 GBA2Q9HCG7 927 aaPredicted RBP19.2■□□□□ 0.66
LRRC28-202ENST00000331450 ARPP21Q9UBL0 812 aaPredicted RBP19.2■□□□□ 0.66
LRRC28-202ENST00000331450 GREB1LQ9C091 1923 aaPredicted RBP19.19■□□□□ 0.66
LRRC28-202ENST00000331450 PHIPQ8WWQ0 1821 aa19.19■□□□□ 0.66
LRRC28-202ENST00000331450 USP17L12C9JPN9 530 aa19.19■□□□□ 0.66
LRRC28-202ENST00000331450 USP17L21D6R901 530 aa19.19■□□□□ 0.66
LRRC28-202ENST00000331450 TBC1D12O60347 775 aa19.19■□□□□ 0.66
LRRC28-202ENST00000331450 SLURP2P0DP57 97 aa19.19■□□□□ 0.66
LRRC28-202ENST00000331450 CYP2D6P10635 497 aa19.19■□□□□ 0.66
LRRC28-202ENST00000331450 PLCD1P51178 756 aa19.19■□□□□ 0.66
LRRC28-202ENST00000331450 APLP1P51693 650 aa19.19■□□□□ 0.66
LRRC28-202ENST00000331450 FKBP1BP68106 108 aa19.19■□□□□ 0.66
LRRC28-202ENST00000331450 C12orf60Q5U649 245 aa19.19■□□□□ 0.66
LRRC28-202ENST00000331450 TTC6Q86TZ1 520 aa19.19■□□□□ 0.66
LRRC28-202ENST00000331450 DDRGK1Q96HY6 314 aa19.19■□□□□ 0.66
LRRC28-202ENST00000331450 DSCC1Q9BVC3 393 aa19.19■□□□□ 0.66
LRRC28-202ENST00000331450 DNAJC18Q9H819 358 aa19.19■□□□□ 0.66
LRRC28-202ENST00000331450 PI4KBQ9UBF8 816 aa19.19■□□□□ 0.66
LRRC28-202ENST00000331450 FZD1Q9UP38 647 aa19.19■□□□□ 0.66
LRRC28-202ENST00000331450 USP2O75604 605 aaPredicted RBP19.18■□□□□ 0.66
LRRC28-202ENST00000331450 APPP05067 770 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms