RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 KRT85P78386 507 aa19.87■□□□□ 0.77
DDX41-201ENST00000330503 CAMKK2Q96RR4 588 aa19.87■□□□□ 0.77
DDX41-201ENST00000330503 ZSCAN16Q9H4T2 348 aaPredicted RBP19.87■□□□□ 0.77
DDX41-201ENST00000330503 DCP1AQ9NPI6 582 aaPredicted RBP19.87■□□□□ 0.77
DDX41-201ENST00000330503 TOMM22Q9NS69 142 aa19.87■□□□□ 0.77
DDX41-201ENST00000330503 FAM217BQ9NTX9 383 aaPredicted RBP19.87■□□□□ 0.77
DDX41-201ENST00000330503 TFIP11Q9UBB9 837 aaKnown RBP19.87■□□□□ 0.77
DDX41-201ENST00000330503 RXRAP19793 462 aa19.86■□□□□ 0.77
DDX41-201ENST00000330503 METAP2P50579 478 aaKnown RBP eCLIP19.86■□□□□ 0.773e-6■■■■□ 22.7
DDX41-201ENST00000330503 EVX2Q03828 476 aa19.86■□□□□ 0.77
DDX41-201ENST00000330503 EZH2Q15910 746 aaKnown RBP19.86■□□□□ 0.77
DDX41-201ENST00000330503 TTC6Q86TZ1 520 aa19.86■□□□□ 0.77
DDX41-201ENST00000330503 ZKSCAN3Q9BRR0 538 aa19.86■□□□□ 0.77
DDX41-201ENST00000330503 MTA3Q9BTC8 594 aa19.86■□□□□ 0.77
DDX41-201ENST00000330503 ANO8Q9HCE9 1232 aaPredicted RBP19.86■□□□□ 0.77
DDX41-201ENST00000330503 KIAA1551Q9HCM1 1747 aa19.85■□□□□ 0.77
DDX41-201ENST00000330503 C6orf229H3BNL8 230 aa19.85■□□□□ 0.77
DDX41-201ENST00000330503 ZBTB43O43298 467 aa19.85■□□□□ 0.77
DDX41-201ENST00000330503 PDE6BP35913 854 aa19.85■□□□□ 0.77
DDX41-201ENST00000330503 MRE11P49959 708 aa19.85■□□□□ 0.77
DDX41-201ENST00000330503 CSPP1Q1MSJ5 1256 aa19.85■□□□□ 0.77
DDX41-201ENST00000330503 OLFM4Q6UX06 510 aa19.85■□□□□ 0.77
DDX41-201ENST00000330503 NFXL1Q6ZNB6 911 aa19.85■□□□□ 0.77
DDX41-201ENST00000330503 GRPEL1Q9HAV7 217 aa19.85■□□□□ 0.77
DDX41-201ENST00000330503 ATP8A2Q9NTI2 1148 aa19.85■□□□□ 0.77
DDX41-201ENST00000330503 ORC3Q9UBD5 711 aaPredicted RBP19.85■□□□□ 0.77
DDX41-201ENST00000330503 MYL10Q9BUA6 226 aa19.85■□□□□ 0.77
DDX41-201ENST00000330503 CPLX1O14810 134 aa19.84■□□□□ 0.77
DDX41-201ENST00000330503 GUCY1B3Q02153 619 aa19.84■□□□□ 0.77
DDX41-201ENST00000330503 EN1Q05925 392 aaPredicted RBP19.84■□□□□ 0.77
DDX41-201ENST00000330503 DIXDC1Q155Q3 683 aa19.84■□□□□ 0.77
DDX41-201ENST00000330503 NTRK3Q16288 839 aa19.84■□□□□ 0.77
DDX41-201ENST00000330503 GSTO1P78417 241 aa19.84■□□□□ 0.77
DDX41-201ENST00000330503 SBK1Q52WX2 424 aa19.84■□□□□ 0.77
DDX41-201ENST00000330503 MICU3Q86XE3 530 aa19.84■□□□□ 0.77
DDX41-201ENST00000330503 MKRN1Q9UHC7 482 aaKnown RBP19.84■□□□□ 0.77
DDX41-201ENST00000330503 SLC12A7Q9Y666 1083 aa19.84■□□□□ 0.77
DDX41-201ENST00000330503 CYP2D6P10635 497 aa19.83■□□□□ 0.77
DDX41-201ENST00000330503 ALDH1B1P30837 517 aa19.83■□□□□ 0.77
DDX41-201ENST00000330503 PPP4CP60510 307 aa19.83■□□□□ 0.77
DDX41-201ENST00000330503 WTAPQ15007 396 aa19.83■□□□□ 0.77
DDX41-201ENST00000330503 SLC15A2Q16348 729 aa19.83■□□□□ 0.77
DDX41-201ENST00000330503 OTUD7BQ6GQQ9 843 aa19.83■□□□□ 0.77
DDX41-201ENST00000330503 CCDC144CPQ8IYA2 1237 aa19.83■□□□□ 0.77
DDX41-201ENST00000330503 MASTLQ96GX5 879 aa19.83■□□□□ 0.77
DDX41-201ENST00000330503 COL11A2P13942 1736 aaPredicted RBP19.83■□□□□ 0.76
DDX41-201ENST00000330503 ELP1O95163 1332 aa19.83■□□□□ 0.76
DDX41-201ENST00000330503 CCDC69A6NI79 296 aa19.82■□□□□ 0.76
DDX41-201ENST00000330503 SEC23AQ15436 765 aa19.82■□□□□ 0.76
DDX41-201ENST00000330503 SH3RF3Q8TEJ3 882 aaPredicted RBP19.82■□□□□ 0.76
DDX41-201ENST00000330503 LEO1Q8WVC0 666 aaPredicted RBP19.82■□□□□ 0.76
DDX41-201ENST00000330503 ESR2Q92731 530 aa19.82■□□□□ 0.76
DDX41-201ENST00000330503 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.82■□□□□ 0.76
DDX41-201ENST00000330503 GOLGA8AA7E2F4 631 aa19.82■□□□□ 0.76
DDX41-201ENST00000330503 SART3Q15020 963 aaKnown RBP19.82■□□□□ 0.76
DDX41-201ENST00000330503 TPRNQ4KMQ1 711 aa19.82■□□□□ 0.76
DDX41-201ENST00000330503 ILDR1Q86SU0 546 aaPredicted RBP19.82■□□□□ 0.76
DDX41-201ENST00000330503 SCAND2PQ9GZW5 306 aaPredicted RBP19.82■□□□□ 0.76
DDX41-201ENST00000330503 DUOX1Q9NRD9 1551 aa19.82■□□□□ 0.76
DDX41-201ENST00000330503 NID2Q14112 1375 aa19.81■□□□□ 0.76
DDX41-201ENST00000330503 RIMBP2O15034 1052 aa19.81■□□□□ 0.76
DDX41-201ENST00000330503 PRDM1O75626 825 aa19.81■□□□□ 0.76
DDX41-201ENST00000330503 TMTC2Q8N394 836 aa19.81■□□□□ 0.76
DDX41-201ENST00000330503 FBXO18Q8NFZ0 1043 aa19.81■□□□□ 0.76
DDX41-201ENST00000330503 FAM205AQ6ZU69 1335 aa19.81■□□□□ 0.76
DDX41-201ENST00000330503 MYH2Q9UKX2 1941 aa19.81■□□□□ 0.76
DDX41-201ENST00000330503 SYCE3A1L190 88 aa19.81■□□□□ 0.76
DDX41-201ENST00000330503 LDHCP07864 332 aa19.81■□□□□ 0.76
DDX41-201ENST00000330503 PCP11498 1178 aaKnown RBP19.81■□□□□ 0.76
DDX41-201ENST00000330503 MPNDQ8N594 471 aa19.81■□□□□ 0.76
DDX41-201ENST00000330503 C8orf76Q96K31 380 aa19.81■□□□□ 0.76
DDX41-201ENST00000330503 RTFDC1Q9BY42 306 aaPredicted RBP19.81■□□□□ 0.76
DDX41-201ENST00000330503 GJB4Q9NTQ9 266 aa19.81■□□□□ 0.76
DDX41-201ENST00000330503 MROH7-TTC4A0A0A0MT08 1334 aa19.8■□□□□ 0.76
DDX41-201ENST00000330503 RANBP6O60518 1105 aaKnown RBP19.8■□□□□ 0.76
DDX41-201ENST00000330503 USP17L8P0C7I0 530 aa19.8■□□□□ 0.76
DDX41-201ENST00000330503 SPATA32Q96LK8 384 aa19.8■□□□□ 0.76
DDX41-201ENST00000330503 PANK2Q9BZ23 570 aa19.8■□□□□ 0.76
DDX41-201ENST00000330503 ERICH2A1L162 156 aa19.79■□□□□ 0.76
DDX41-201ENST00000330503 ORC4O43929 436 aa19.79■□□□□ 0.76
DDX41-201ENST00000330503 CDKL5O76039 1030 aa19.79■□□□□ 0.76
DDX41-201ENST00000330503 LRSAM1Q6UWE0 723 aa19.79■□□□□ 0.76
DDX41-201ENST00000330503 SYNE3Q6ZMZ3 975 aa19.79■□□□□ 0.76
DDX41-201ENST00000330503 PHKBQ93100 1093 aa19.79■□□□□ 0.76
DDX41-201ENST00000330503 SYAP1Q96A49 352 aaPredicted RBP19.79■□□□□ 0.76
DDX41-201ENST00000330503 ZSCAN10Q96SZ4 725 aaPredicted RBP19.79■□□□□ 0.76
DDX41-201ENST00000330503 UBAC1Q9BSL1 405 aa19.79■□□□□ 0.76
DDX41-201ENST00000330503 ARPP21Q9UBL0 812 aaPredicted RBP19.79■□□□□ 0.76
DDX41-201ENST00000330503 BAG3O95817 575 aa19.79■□□□□ 0.76
DDX41-201ENST00000330503 MFSD14BQ5SR56 506 aa19.79■□□□□ 0.76
DDX41-201ENST00000330503 C2CD5Q86YS7 1000 aa19.79■□□□□ 0.76
DDX41-201ENST00000330503 ENAHQ8N8S7 591 aaPredicted RBP19.79■□□□□ 0.76
DDX41-201ENST00000330503 AIFM3Q96NN9 605 aa19.79■□□□□ 0.76
DDX41-201ENST00000330503 COA1Q9GZY4 146 aa19.79■□□□□ 0.76
DDX41-201ENST00000330503 MCM9Q9NXL9 1143 aa19.79■□□□□ 0.76
DDX41-201ENST00000330503 TNKSO95271 1327 aa19.79■□□□□ 0.76
DDX41-201ENST00000330503 CPLX2Q6PUV4 134 aaKnown RBP19.78■□□□□ 0.76
DDX41-201ENST00000330503 RGS22Q8NE09 1264 aa19.78■□□□□ 0.76
DDX41-201ENST00000330503 ZNF622Q969S3 477 aaKnown RBP eCLIP19.78■□□□□ 0.761e-8■■□□□ 13.5
DDX41-201ENST00000330503 MYH15Q9Y2K3 1946 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms