RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 DNTTIP2Q5QJE6 756 aaKnown RBP16.9■□□□□ 0.3
TPM3-206ENST00000330188 CCDC186Q7Z3E2 898 aa16.9■□□□□ 0.3
TPM3-206ENST00000330188 ADGRA1Q86SQ6 560 aa16.9■□□□□ 0.3
TPM3-206ENST00000330188 SDF4Q9BRK5 362 aa16.9■□□□□ 0.3
TPM3-206ENST00000330188 CYP7A1P22680 504 aa16.9■□□□□ 0.3
TPM3-206ENST00000330188 GYG1P46976 350 aa16.9■□□□□ 0.3
TPM3-206ENST00000330188 UBE4AQ14139 1066 aa16.9■□□□□ 0.3
TPM3-206ENST00000330188 RRP12Q5JTH9 1297 aaKnown RBP16.9■□□□□ 0.3
TPM3-206ENST00000330188 DRC7Q8IY82 874 aa16.9■□□□□ 0.3
TPM3-206ENST00000330188 NRBP1Q9UHY1 535 aa16.9■□□□□ 0.3
TPM3-206ENST00000330188 WTIPA6NIX2 430 aaPredicted RBP16.89■□□□□ 0.29
TPM3-206ENST00000330188 WDHD1O75717 1129 aaPredicted RBP16.89■□□□□ 0.29
TPM3-206ENST00000330188 FMNL1O95466 1100 aaPredicted RBP16.89■□□□□ 0.29
TPM3-206ENST00000330188 U2AF2P26368 475 aaKnown RBP eCLIP16.89■□□□□ 0.295e-7■■■■□ 22.9
TPM3-206ENST00000330188 SLC26A6Q9BXS9 759 aa16.89■□□□□ 0.29
TPM3-206ENST00000330188 BSDC1Q9NW68 430 aaPredicted RBP16.89■□□□□ 0.29
TPM3-206ENST00000330188 MROH7-TTC4A0A0A0MT08 1334 aa16.89■□□□□ 0.29
TPM3-206ENST00000330188 UBE2Q2LH0YL09 131 aa16.88■□□□□ 0.29
TPM3-206ENST00000330188 IFNAR1P17181 557 aa16.88■□□□□ 0.29
TPM3-206ENST00000330188 CMA1P23946 247 aa16.88■□□□□ 0.29
TPM3-206ENST00000330188 SSRP1Q08945 709 aaKnown RBP16.88■□□□□ 0.29
TPM3-206ENST00000330188 WTAPQ15007 396 aa16.88■□□□□ 0.29
TPM3-206ENST00000330188 FAM98CQ17RN3 349 aaKnown RBP16.88■□□□□ 0.29
TPM3-206ENST00000330188 CEP57L1Q8IYX8 460 aa16.88■□□□□ 0.29
TPM3-206ENST00000330188 MTA3Q9BTC8 594 aa16.88■□□□□ 0.29
TPM3-206ENST00000330188 KIAA1468Q9P260 1216 aa16.88■□□□□ 0.29
TPM3-206ENST00000330188 CLIP2Q9UDT6 1046 aa16.88■□□□□ 0.29
TPM3-206ENST00000330188 CNTNAP4Q9C0A0 1308 aa16.88■□□□□ 0.29
TPM3-206ENST00000330188 BECN2A8MW95 431 aa16.88■□□□□ 0.29
TPM3-206ENST00000330188 ZNF202O95125 648 aa16.88■□□□□ 0.29
TPM3-206ENST00000330188 PFKFB1P16118 471 aa16.88■□□□□ 0.29
TPM3-206ENST00000330188 KCNQ4P56696 695 aa16.88■□□□□ 0.29
TPM3-206ENST00000330188 PPARAQ07869 468 aa16.88■□□□□ 0.29
TPM3-206ENST00000330188 TRIM29Q14134 588 aa16.88■□□□□ 0.29
TPM3-206ENST00000330188 PTPAQ15257 358 aa16.88■□□□□ 0.29
TPM3-206ENST00000330188 ZKSCAN3Q9BRR0 538 aa16.88■□□□□ 0.29
TPM3-206ENST00000330188 TOMM22Q9NS69 142 aa16.88■□□□□ 0.29
TPM3-206ENST00000330188 GNL3LQ9NVN8 582 aaKnown RBP16.88■□□□□ 0.29
TPM3-206ENST00000330188 ABCF2Q9UG63 623 aa16.88■□□□□ 0.29
TPM3-206ENST00000330188 PPP6R2O75170 966 aa16.87■□□□□ 0.29
TPM3-206ENST00000330188 MARCKSP29966 332 aaPredicted RBP16.87■□□□□ 0.29
TPM3-206ENST00000330188 GNL2Q13823 731 aaKnown RBP16.87■□□□□ 0.29
TPM3-206ENST00000330188 SART3Q15020 963 aaKnown RBP16.87■□□□□ 0.29
TPM3-206ENST00000330188 MAP3K14Q99558 947 aa16.87■□□□□ 0.29
TPM3-206ENST00000330188 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.87■□□□□ 0.29
TPM3-206ENST00000330188 RNF41Q9H4P4 317 aaPredicted RBP16.87■□□□□ 0.29
TPM3-206ENST00000330188 BCL2L12Q9HB09 334 aa16.87■□□□□ 0.29
TPM3-206ENST00000330188 RAI14Q9P0K7 980 aa16.87■□□□□ 0.29
TPM3-206ENST00000330188 TAOK2Q9UL54 1235 aa16.87■□□□□ 0.29
TPM3-206ENST00000330188 MINPP1Q9UNW1 487 aa16.87■□□□□ 0.29
TPM3-206ENST00000330188 TBC1D9BQ66K14 1250 aa16.87■□□□□ 0.29
TPM3-206ENST00000330188 STK11IPQ8N1F8 1099 aa16.87■□□□□ 0.29
TPM3-206ENST00000330188 SDR42E1Q8WUS8 393 aa16.87■□□□□ 0.29
TPM3-206ENST00000330188 MRFAP1L1Q96HT8 127 aa16.87■□□□□ 0.29
TPM3-206ENST00000330188 COL24A1Q17RW2 1714 aa16.86■□□□□ 0.29
TPM3-206ENST00000330188 MAGEB6P1A0A0J9YX57 407 aa16.86■□□□□ 0.29
TPM3-206ENST00000330188 GUCY1A2P33402 732 aa16.86■□□□□ 0.29
TPM3-206ENST00000330188 LRMPQ12912 555 aa16.86■□□□□ 0.29
TPM3-206ENST00000330188 RTN1Q16799 776 aa16.86■□□□□ 0.29
TPM3-206ENST00000330188 SLC10A5Q5PT55 438 aa16.86■□□□□ 0.29
TPM3-206ENST00000330188 AOPEPQ8N6M6 819 aa16.86■□□□□ 0.29
TPM3-206ENST00000330188 WASF1Q92558 559 aa16.86■□□□□ 0.29
TPM3-206ENST00000330188 CELF1Q92879 486 aaKnown RBP16.86■□□□□ 0.29
TPM3-206ENST00000330188 RIOK1Q9BRS2 568 aaKnown RBP16.86■□□□□ 0.29
TPM3-206ENST00000330188 NAT10Q9H0A0 1025 aaKnown RBP16.86■□□□□ 0.29
TPM3-206ENST00000330188 ANAPC4Q9UJX5 808 aa16.86■□□□□ 0.29
TPM3-206ENST00000330188 RGL2O15211 777 aa16.85■□□□□ 0.29
TPM3-206ENST00000330188 SLC3A2P08195 630 aaKnown RBP16.85■□□□□ 0.29
TPM3-206ENST00000330188 CCDC144BQ3MJ40 725 aa16.85■□□□□ 0.29
TPM3-206ENST00000330188 CAVIN4Q5BKX8 364 aa16.85■□□□□ 0.29
TPM3-206ENST00000330188 BICDL1Q6ZP65 573 aa16.85■□□□□ 0.29
TPM3-206ENST00000330188 SMIM5Q71RC9 77 aa16.85■□□□□ 0.29
TPM3-206ENST00000330188 HPSEQ9Y251 543 aa16.85■□□□□ 0.29
TPM3-206ENST00000330188 BAZ2AQ9UIF9 1905 aaKnown RBP16.85■□□□□ 0.29
TPM3-206ENST00000330188 MYH13Q9UKX3 1938 aa16.85■□□□□ 0.29
TPM3-206ENST00000330188 DUOX1Q9NRD9 1551 aa16.85■□□□□ 0.29
TPM3-206ENST00000330188 ERICH2A1L162 156 aa16.85■□□□□ 0.29
TPM3-206ENST00000330188 SHC4Q6S5L8 630 aa16.85■□□□□ 0.29
TPM3-206ENST00000330188 NBPF11Q86T75 865 aa16.85■□□□□ 0.29
TPM3-206ENST00000330188 TMTC2Q8N394 836 aa16.85■□□□□ 0.29
TPM3-206ENST00000330188 JMYQ8N9B5 988 aa16.85■□□□□ 0.29
TPM3-206ENST00000330188 FBXW7Q969H0 707 aa16.85■□□□□ 0.29
TPM3-206ENST00000330188 FAM84BQ96KN1 310 aaPredicted RBP16.85■□□□□ 0.29
TPM3-206ENST00000330188 PRIMPOLQ96LW4 560 aa16.85■□□□□ 0.29
TPM3-206ENST00000330188 MINDY4BA8MYZ0 360 aa16.84■□□□□ 0.29
TPM3-206ENST00000330188 RCAN1P53805 252 aa16.84■□□□□ 0.29
TPM3-206ENST00000330188 DPCR1Q3MIW9 517 aa16.84■□□□□ 0.29
TPM3-206ENST00000330188 ZNF654Q8IZM8 581 aa16.84■□□□□ 0.29
TPM3-206ENST00000330188 MYRIPQ8NFW9 859 aa16.84■□□□□ 0.29
TPM3-206ENST00000330188 TIGD1Q96MW7 591 aa16.84■□□□□ 0.29
TPM3-206ENST00000330188 BPIFA3Q9BQP9 254 aa16.84■□□□□ 0.29
TPM3-206ENST00000330188 MYH2Q9UKX2 1941 aa16.84■□□□□ 0.29
TPM3-206ENST00000330188 FAM237AA0A1B0GTK4 181 aa16.84■□□□□ 0.29
TPM3-206ENST00000330188 SMIM22K7EJ46 135 aa16.84■□□□□ 0.29
TPM3-206ENST00000330188 DYNC1I1O14576 645 aa16.84■□□□□ 0.29
TPM3-206ENST00000330188 RRP9O43818 475 aaKnown RBP16.84■□□□□ 0.29
TPM3-206ENST00000330188 MMP1P03956 469 aa16.84■□□□□ 0.29
TPM3-206ENST00000330188 GTF2E1P29083 439 aaPredicted RBP16.84■□□□□ 0.29
TPM3-206ENST00000330188 PIP4K2BP78356 416 aa16.84■□□□□ 0.29
TPM3-206ENST00000330188 SEC23AQ15436 765 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms