RNA–Protein interactions for RNA: ENST00000325404.2

SOX2-201, Transcript of SRY-box 2, humanhuman

APPRIS P1 BASIC

Gene SOX2, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-201ENST00000325404 NTRK3Q16288 839 aa22.96■■□□□ 1.27
SOX2-201ENST00000325404 AK7Q96M32 723 aa22.96■■□□□ 1.27
SOX2-201ENST00000325404 CCDC85AQ96PX6 553 aaPredicted RBP22.96■■□□□ 1.27
SOX2-201ENST00000325404 ARID3AQ99856 593 aa22.96■■□□□ 1.27
SOX2-201ENST00000325404 IFNKQ9P0W0 207 aa22.96■■□□□ 1.27
SOX2-201ENST00000325404 THSD7AQ9UPZ6 1657 aa22.95■■□□□ 1.27
SOX2-201ENST00000325404 PDE6AP16499 860 aa22.95■■□□□ 1.26
SOX2-201ENST00000325404 RESP18Q5W5W9 173 aa22.95■■□□□ 1.26
SOX2-201ENST00000325404 STRBPQ96SI9 672 aaKnown RBP22.95■■□□□ 1.26
SOX2-201ENST00000325404 MAP3K14Q99558 947 aa22.95■■□□□ 1.26
SOX2-201ENST00000325404 GTPBP4Q9BZE4 634 aaKnown RBP22.95■■□□□ 1.26
SOX2-201ENST00000325404 OGFRQ9NZT2 677 aa22.95■■□□□ 1.26
SOX2-201ENST00000325404 ZBTB43O43298 467 aa22.95■■□□□ 1.26
SOX2-201ENST00000325404 ZSCAN20P17040 1043 aaPredicted RBP22.95■■□□□ 1.26
SOX2-201ENST00000325404 DMTNQ08495 405 aa22.95■■□□□ 1.26
SOX2-201ENST00000325404 GJB4Q9NTQ9 266 aa22.95■■□□□ 1.26
SOX2-201ENST00000325404 PRDM4Q9UKN5 801 aa22.95■■□□□ 1.26
SOX2-201ENST00000325404 MROH7-TTC4A0A0A0MT08 1334 aa22.94■■□□□ 1.26
SOX2-201ENST00000325404 ZNF532Q9HCE3 1301 aa22.94■■□□□ 1.26
SOX2-201ENST00000325404 LRP5O75197 1615 aa22.94■■□□□ 1.26
SOX2-201ENST00000325404 MYH3P11055 1940 aa22.94■■□□□ 1.26
SOX2-201ENST00000325404 PDE8AO60658 829 aa22.94■■□□□ 1.26
SOX2-201ENST00000325404 CUTAO60888 179 aa22.94■■□□□ 1.26
SOX2-201ENST00000325404 ERO1AQ96HE7 468 aa22.94■■□□□ 1.26
SOX2-201ENST00000325404 GJD4Q96KN9 370 aaPredicted RBP22.94■■□□□ 1.26
SOX2-201ENST00000325404 CAMTA2O94983 1202 aa22.93■■□□□ 1.26
SOX2-201ENST00000325404 SMC2O95347 1197 aa22.93■■□□□ 1.26
SOX2-201ENST00000325404 SFPQP23246 707 aaKnown RBP eCLIP22.93■■□□□ 1.26
SOX2-201ENST00000325404 CCDC102BQ68D86 513 aa22.93■■□□□ 1.26
SOX2-201ENST00000325404 LPIN2Q92539 896 aa22.93■■□□□ 1.26
SOX2-201ENST00000325404 MTA3Q9BTC8 594 aa22.93■■□□□ 1.26
SOX2-201ENST00000325404 AFF2P51816 1311 aa22.93■■□□□ 1.26
SOX2-201ENST00000325404 MROH5Q6ZUA9 1318 aa22.93■■□□□ 1.26
SOX2-201ENST00000325404 MYH14Q7Z406 1995 aaKnown RBP22.93■■□□□ 1.26
SOX2-201ENST00000325404 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.93■■□□□ 1.26
SOX2-201ENST00000325404 CBFA2T2O43439 604 aa22.93■■□□□ 1.26
SOX2-201ENST00000325404 FGFR2P21802 821 aa22.93■■□□□ 1.26
SOX2-201ENST00000325404 IARSP41252 1262 aaKnown RBP22.93■■□□□ 1.26
SOX2-201ENST00000325404 TRIM29Q14134 588 aa22.93■■□□□ 1.26
SOX2-201ENST00000325404 ARMCX5Q6P1M9 558 aa22.93■■□□□ 1.26
SOX2-201ENST00000325404 WASF1Q92558 559 aa22.93■■□□□ 1.26
SOX2-201ENST00000325404 LY9Q9HBG7 655 aa22.93■■□□□ 1.26
SOX2-201ENST00000325404 ZNF831Q5JPB2 1677 aa22.93■■□□□ 1.26
SOX2-201ENST00000325404 ARAP2Q8WZ64 1704 aa22.93■■□□□ 1.26
SOX2-201ENST00000325404 PATL2C9JE40 543 aaKnown RBP22.92■■□□□ 1.26
SOX2-201ENST00000325404 CCP110O43303 1012 aa22.92■■□□□ 1.26
SOX2-201ENST00000325404 CBX1P83916 185 aa22.92■■□□□ 1.26
SOX2-201ENST00000325404 PUM3Q15397 648 aaKnown RBP22.92■■□□□ 1.26
SOX2-201ENST00000325404 SHC4Q6S5L8 630 aa22.92■■□□□ 1.26
SOX2-201ENST00000325404 CNNM2Q9H8M5 875 aa22.92■■□□□ 1.26
SOX2-201ENST00000325404 CDC27P30260 824 aa22.92■■□□□ 1.26
SOX2-201ENST00000325404 TMC6Q7Z403 805 aa22.92■■□□□ 1.26
SOX2-201ENST00000325404 RAB11FIP4Q86YS3 637 aa22.92■■□□□ 1.26
SOX2-201ENST00000325404 ZNF592Q92610 1267 aa22.92■■□□□ 1.26
SOX2-201ENST00000325404 IDH1O75874 414 aaKnown RBP22.91■■□□□ 1.26
SOX2-201ENST00000325404 APPP05067 770 aa22.91■■□□□ 1.26
SOX2-201ENST00000325404 FANCCQ00597 558 aa22.91■■□□□ 1.26
SOX2-201ENST00000325404 E4F1Q66K89 784 aaPredicted RBP22.91■■□□□ 1.26
SOX2-201ENST00000325404 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.91■■□□□ 1.26
SOX2-201ENST00000325404 FAM217BQ9NTX9 383 aaPredicted RBP22.91■■□□□ 1.26
SOX2-201ENST00000325404 PARP10Q53GL7 1025 aa22.91■■□□□ 1.26
SOX2-201ENST00000325404 LINC00116Q8NCU8 138 aa22.91■■□□□ 1.26
SOX2-201ENST00000325404 FBXW7Q969H0 707 aa22.91■■□□□ 1.26
SOX2-201ENST00000325404 AIDAQ96BJ3 306 aa22.91■■□□□ 1.26
SOX2-201ENST00000325404 COL5A3P25940 1745 aaPredicted RBP22.9■■□□□ 1.26
SOX2-201ENST00000325404 TIAM2Q8IVF5 1701 aa22.9■■□□□ 1.26
SOX2-201ENST00000325404 B4E1Z4 1266 aa22.9■■□□□ 1.26
SOX2-201ENST00000325404 MARCKSP29966 332 aaPredicted RBP22.9■■□□□ 1.26
SOX2-201ENST00000325404 MYL5Q02045 173 aa22.9■■□□□ 1.26
SOX2-201ENST00000325404 GNL2Q13823 731 aaKnown RBP22.9■■□□□ 1.26
SOX2-201ENST00000325404 HSD3B7Q9H2F3 369 aa22.9■■□□□ 1.26
SOX2-201ENST00000325404 L2HGDHQ9H9P8 463 aa22.9■■□□□ 1.26
SOX2-201ENST00000325404 GOLGA8AA7E2F4 631 aa22.9■■□□□ 1.26
SOX2-201ENST00000325404 BIN1O00499 593 aa22.9■■□□□ 1.26
SOX2-201ENST00000325404 NOL10Q9BSC4 688 aaKnown RBP22.9■■□□□ 1.26
SOX2-201ENST00000325404 SLU7O95391 586 aaKnown RBP22.89■■□□□ 1.26
SOX2-201ENST00000325404 FMNL1O95466 1100 aaPredicted RBP22.89■■□□□ 1.26
SOX2-201ENST00000325404 IFNAR1P17181 557 aa22.89■■□□□ 1.26
SOX2-201ENST00000325404 PHKA1P46020 1223 aa22.89■■□□□ 1.26
SOX2-201ENST00000325404 RCAN1P53805 252 aa22.89■■□□□ 1.26
SOX2-201ENST00000325404 TMEM67Q5HYA8 995 aa22.89■■□□□ 1.26
SOX2-201ENST00000325404 SUSD4Q5VX71 490 aa22.89■■□□□ 1.26
SOX2-201ENST00000325404 PTF1AQ7RTS3 328 aa22.89■■□□□ 1.26
SOX2-201ENST00000325404 AIFM3Q96NN9 605 aa22.89■■□□□ 1.26
SOX2-201ENST00000325404 KRT23Q9C075 422 aa22.89■■□□□ 1.26
SOX2-201ENST00000325404 TRMT1Q9NXH9 659 aaKnown RBP22.89■■□□□ 1.26
SOX2-201ENST00000325404 SSRP1Q08945 709 aaKnown RBP22.89■■□□□ 1.25
SOX2-201ENST00000325404 ZNF397Q8NF99 534 aaPredicted RBP22.89■■□□□ 1.25
SOX2-201ENST00000325404 PPP1R13BQ96KQ4 1090 aa22.89■■□□□ 1.25
SOX2-201ENST00000325404 UTP14AQ9BVJ6 771 aaKnown RBP22.89■■□□□ 1.25
SOX2-201ENST00000325404 WWC3Q9ULE0 1092 aa22.89■■□□□ 1.25
SOX2-201ENST00000325404 DENND2AQ9ULE3 1009 aa22.89■■□□□ 1.25
SOX2-201ENST00000325404 ZNF652Q9Y2D9 606 aa22.89■■□□□ 1.25
SOX2-201ENST00000325404 NFXL1Q6ZNB6 911 aa22.88■■□□□ 1.25
SOX2-201ENST00000325404 DDX41Q9UJV9 622 aaKnown RBP22.88■■□□□ 1.25
SOX2-201ENST00000325404 ZNF215Q9UL58 517 aaPredicted RBP22.88■■□□□ 1.25
SOX2-201ENST00000325404 TRPC5Q9UL62 973 aaPredicted RBP22.88■■□□□ 1.25
SOX2-201ENST00000325404 CNTNAP4Q9C0A0 1308 aa22.88■■□□□ 1.25
SOX2-201ENST00000325404 RANBP6O60518 1105 aaKnown RBP22.88■■□□□ 1.25
SOX2-201ENST00000325404 MAP3K12Q12852 859 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms