RNA–Protein interactions for RNA: ENST00000320857.7

SSR4-201, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSR4, Length 1,671 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-201ENST00000320857 RRP12Q5JTH9 1297 aaKnown RBP19.87■□□□□ 0.77
SSR4-201ENST00000320857 APOA5Q6Q788 366 aa19.87■□□□□ 0.77
SSR4-201ENST00000320857 SYNE3Q6ZMZ3 975 aa19.87■□□□□ 0.77
SSR4-201ENST00000320857 NKX2-3Q8TAU0 364 aa19.87■□□□□ 0.77
SSR4-201ENST00000320857 ZNF384Q8TF68 577 aa19.87■□□□□ 0.77
SSR4-201ENST00000320857 CRNKL1Q9BZJ0 848 aaKnown RBP19.87■□□□□ 0.77
SSR4-201ENST00000320857 INCENPQ9NQS7 918 aa19.87■□□□□ 0.77
SSR4-201ENST00000320857 ATF5Q9Y2D1 282 aaPredicted RBP19.87■□□□□ 0.77
SSR4-201ENST00000320857 ERICH2A1L162 156 aa19.86■□□□□ 0.77
SSR4-201ENST00000320857 CCDC69A6NI79 296 aa19.86■□□□□ 0.77
SSR4-201ENST00000320857 MINDY4BA8MYZ0 360 aa19.86■□□□□ 0.77
SSR4-201ENST00000320857 FOSBP53539 338 aa19.86■□□□□ 0.77
SSR4-201ENST00000320857 DZIP1Q86YF9 867 aaKnown RBP19.86■□□□□ 0.77
SSR4-201ENST00000320857 TMTC2Q8N394 836 aa19.86■□□□□ 0.77
SSR4-201ENST00000320857 TDRD7Q8NHU6 1098 aaKnown RBP19.86■□□□□ 0.77
SSR4-201ENST00000320857 LEO1Q8WVC0 666 aaPredicted RBP19.86■□□□□ 0.77
SSR4-201ENST00000320857 C8orf76Q96K31 380 aa19.86■□□□□ 0.77
SSR4-201ENST00000320857 PODXL2Q9NZ53 605 aa19.86■□□□□ 0.77
SSR4-201ENST00000320857 TFIP11Q9UBB9 837 aaKnown RBP19.86■□□□□ 0.77
SSR4-201ENST00000320857 TACC3Q9Y6A5 838 aa19.86■□□□□ 0.77
SSR4-201ENST00000320857 GOLGA6L4A6NEF3 574 aa19.85■□□□□ 0.77
SSR4-201ENST00000320857 PCP11498 1178 aaKnown RBP19.85■□□□□ 0.77
SSR4-201ENST00000320857 SLC51AQ86UW1 340 aa19.85■□□□□ 0.77
SSR4-201ENST00000320857 RAB11FIP4Q86YS3 637 aa19.85■□□□□ 0.77
SSR4-201ENST00000320857 ANP32BQ92688 251 aaKnown RBP19.85■□□□□ 0.77
SSR4-201ENST00000320857 ZNF396Q96N95 335 aaPredicted RBP19.85■□□□□ 0.77
SSR4-201ENST00000320857 GGA1Q9UJY5 639 aa19.85■□□□□ 0.77
SSR4-201ENST00000320857 SLC12A7Q9Y666 1083 aa19.85■□□□□ 0.77
SSR4-201ENST00000320857 PARP3Q9Y6F1 533 aa19.85■□□□□ 0.77
SSR4-201ENST00000320857 LRRC37AA6NMS7 1700 aa19.85■□□□□ 0.77
SSR4-201ENST00000320857 MAST2Q6P0Q8 1798 aa19.85■□□□□ 0.77
SSR4-201ENST00000320857 GOLGA8AA7E2F4 631 aa19.84■□□□□ 0.77
SSR4-201ENST00000320857 MMP10P09238 476 aa19.84■□□□□ 0.77
SSR4-201ENST00000320857 PRDX5P30044 214 aa19.84■□□□□ 0.77
SSR4-201ENST00000320857 ESR2Q92731 530 aa19.84■□□□□ 0.77
SSR4-201ENST00000320857 TSPY26PQ9H489 355 aa19.84■□□□□ 0.77
SSR4-201ENST00000320857 UFL1O94874 794 aa19.84■□□□□ 0.77
SSR4-201ENST00000320857 LDHBP07195 334 aaKnown RBP19.84■□□□□ 0.77
SSR4-201ENST00000320857 GSTO1P78417 241 aa19.84■□□□□ 0.77
SSR4-201ENST00000320857 WTAPQ15007 396 aa19.84■□□□□ 0.77
SSR4-201ENST00000320857 MICU3Q86XE3 530 aa19.84■□□□□ 0.77
SSR4-201ENST00000320857 RBSNQ9H1K0 784 aa19.84■□□□□ 0.77
SSR4-201ENST00000320857 ATP8A2Q9NTI2 1148 aa19.84■□□□□ 0.77
SSR4-201ENST00000320857 CHD4Q14839 1912 aa19.83■□□□□ 0.77
SSR4-201ENST00000320857 SRGNP10124 158 aa19.83■□□□□ 0.76
SSR4-201ENST00000320857 PDE6BP35913 854 aa19.83■□□□□ 0.76
SSR4-201ENST00000320857 RCAN1P53805 252 aa19.83■□□□□ 0.76
SSR4-201ENST00000320857 TPRNQ4KMQ1 711 aa19.83■□□□□ 0.76
SSR4-201ENST00000320857 SP8Q8IXZ3 490 aa19.83■□□□□ 0.76
SSR4-201ENST00000320857 UBAC1Q9BSL1 405 aa19.83■□□□□ 0.76
SSR4-201ENST00000320857 SENP2Q9HC62 589 aa19.83■□□□□ 0.76
SSR4-201ENST00000320857 AATFQ9NY61 560 aaKnown RBP eCLIP19.83■□□□□ 0.76
SSR4-201ENST00000320857 NID2Q14112 1375 aa19.83■□□□□ 0.76
SSR4-201ENST00000320857 PPFIA3O75145 1194 aa19.82■□□□□ 0.76
SSR4-201ENST00000320857 NPR1P16066 1061 aa19.82■□□□□ 0.76
SSR4-201ENST00000320857 GUCY1B3Q02153 619 aa19.82■□□□□ 0.76
SSR4-201ENST00000320857 FBXO18Q8NFZ0 1043 aa19.82■□□□□ 0.76
SSR4-201ENST00000320857 CCDC88AQ3V6T2 1871 aa19.81■□□□□ 0.76
SSR4-201ENST00000320857 PPEF1O14829 653 aaPredicted RBP19.81■□□□□ 0.76
SSR4-201ENST00000320857 ADD1P35611 737 aaKnown RBP19.81■□□□□ 0.76
SSR4-201ENST00000320857 CTR9Q6PD62 1173 aa19.81■□□□□ 0.76
SSR4-201ENST00000320857 SLC16A10Q8TF71 515 aa19.81■□□□□ 0.76
SSR4-201ENST00000320857 LTBP1Q14766 1721 aa19.81■□□□□ 0.76
SSR4-201ENST00000320857 LDHCP07864 332 aa19.81■□□□□ 0.76
SSR4-201ENST00000320857 SLC3A2P08195 630 aaKnown RBP19.81■□□□□ 0.76
SSR4-201ENST00000320857 STK11IPQ8N1F8 1099 aa19.81■□□□□ 0.76
SSR4-201ENST00000320857 JAG2Q9Y219 1238 aa19.81■□□□□ 0.76
SSR4-201ENST00000320857 ATP6V0A2Q9Y487 856 aa19.81■□□□□ 0.76
SSR4-201ENST00000320857 FGRP09769 529 aa19.8■□□□□ 0.76
SSR4-201ENST00000320857 CDC27P30260 824 aa19.8■□□□□ 0.76
SSR4-201ENST00000320857 ALDH1B1P30837 517 aa19.8■□□□□ 0.76
SSR4-201ENST00000320857 IARSP41252 1262 aaKnown RBP19.8■□□□□ 0.76
SSR4-201ENST00000320857 BRAPQ7Z569 592 aa19.8■□□□□ 0.76
SSR4-201ENST00000320857 TBC1D16Q8TBP0 767 aa19.8■□□□□ 0.76
SSR4-201ENST00000320857 MTFR1LQ9H019 292 aa19.8■□□□□ 0.76
SSR4-201ENST00000320857 CD209Q9NNX6 404 aa19.8■□□□□ 0.76
SSR4-201ENST00000320857 DCP1AQ9NPI6 582 aaPredicted RBP19.8■□□□□ 0.76
SSR4-201ENST00000320857 DUOX1Q9NRD9 1551 aa19.8■□□□□ 0.76
SSR4-201ENST00000320857 STK36Q9NRP7 1315 aa19.8■□□□□ 0.76
SSR4-201ENST00000320857 ARPP21Q9UBL0 812 aaPredicted RBP19.8■□□□□ 0.76
SSR4-201ENST00000320857 RCOR1Q9UKL0 485 aa19.8■□□□□ 0.76
SSR4-201ENST00000320857 KIAA1551Q9HCM1 1747 aa19.79■□□□□ 0.76
SSR4-201ENST00000320857 CCDC196A0A1B0GTZ2 297 aa19.79■□□□□ 0.76
SSR4-201ENST00000320857 USP17L12C9JPN9 530 aa19.79■□□□□ 0.76
SSR4-201ENST00000320857 USP17L21D6R901 530 aa19.79■□□□□ 0.76
SSR4-201ENST00000320857 IL1R1P14778 569 aa19.79■□□□□ 0.76
SSR4-201ENST00000320857 RXRAP19793 462 aa19.79■□□□□ 0.76
SSR4-201ENST00000320857 SBK1Q52WX2 424 aa19.79■□□□□ 0.76
SSR4-201ENST00000320857 ZKSCAN3Q9BRR0 538 aa19.79■□□□□ 0.76
SSR4-201ENST00000320857 NOL10Q9BSC4 688 aaKnown RBP19.79■□□□□ 0.76
SSR4-201ENST00000320857 ALG1Q9BT22 464 aa19.79■□□□□ 0.76
SSR4-201ENST00000320857 BAG3O95817 575 aa19.78■□□□□ 0.76
SSR4-201ENST00000320857 SSRP1Q08945 709 aaKnown RBP19.78■□□□□ 0.76
SSR4-201ENST00000320857 CCDC173Q0VFZ6 552 aa19.78■□□□□ 0.76
SSR4-201ENST00000320857 NTRK3Q16288 839 aa19.78■□□□□ 0.76
SSR4-201ENST00000320857 RTN1Q16799 776 aa19.78■□□□□ 0.76
SSR4-201ENST00000320857 WASF1Q92558 559 aa19.78■□□□□ 0.76
SSR4-201ENST00000320857 MASTLQ96GX5 879 aa19.78■□□□□ 0.76
SSR4-201ENST00000320857 GPR101Q96P66 508 aaPredicted RBP19.78■□□□□ 0.76
SSR4-201ENST00000320857 FAM217BQ9NTX9 383 aaPredicted RBP19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms