RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 DSCC1Q9BVC3 393 aa19.89■□□□□ 0.77
SCAMP4-201ENST00000316097 TFCP2L1Q9NZI6 479 aa19.89■□□□□ 0.77
SCAMP4-201ENST00000316097 PDE6AP16499 860 aa19.89■□□□□ 0.77
SCAMP4-201ENST00000316097 SCRN1Q12765 414 aa19.89■□□□□ 0.77
SCAMP4-201ENST00000316097 SLC27A3Q5K4L6 730 aa19.89■□□□□ 0.77
SCAMP4-201ENST00000316097 MAGEB6Q8N7X4 407 aa19.89■□□□□ 0.77
SCAMP4-201ENST00000316097 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.89■□□□□ 0.77
SCAMP4-201ENST00000316097 RCOR1Q9UKL0 485 aa19.89■□□□□ 0.77
SCAMP4-201ENST00000316097 FGAP02671 866 aa19.88■□□□□ 0.77
SCAMP4-201ENST00000316097 ZNF827Q17R98 1081 aa19.88■□□□□ 0.77
SCAMP4-201ENST00000316097 PRR5LQ6MZQ0 368 aa19.88■□□□□ 0.77
SCAMP4-201ENST00000316097 USP28Q96RU2 1077 aa19.88■□□□□ 0.77
SCAMP4-201ENST00000316097 TMEM51Q9NW97 253 aa19.88■□□□□ 0.77
SCAMP4-201ENST00000316097 KIF2AO00139 706 aaPredicted RBP19.88■□□□□ 0.77
SCAMP4-201ENST00000316097 ZFYP08048 801 aaPredicted RBP19.88■□□□□ 0.77
SCAMP4-201ENST00000316097 GSDMDP57764 484 aa19.88■□□□□ 0.77
SCAMP4-201ENST00000316097 ERCC6LQ2NKX8 1250 aa19.88■□□□□ 0.77
SCAMP4-201ENST00000316097 TTF1Q15361 905 aaPredicted RBP19.87■□□□□ 0.77
SCAMP4-201ENST00000316097 FSIP1Q8NA03 581 aa19.87■□□□□ 0.77
SCAMP4-201ENST00000316097 JAG2Q9Y219 1238 aa19.87■□□□□ 0.77
SCAMP4-201ENST00000316097 C4AP0C0L4 1744 aa19.87■□□□□ 0.77
SCAMP4-201ENST00000316097 MYO5AQ9Y4I1 1855 aaKnown RBP19.87■□□□□ 0.77
SCAMP4-201ENST00000316097 CARMIL3Q8ND23 1372 aa19.87■□□□□ 0.77
SCAMP4-201ENST00000316097 RXRBP28702 533 aa19.87■□□□□ 0.77
SCAMP4-201ENST00000316097 NBPF11Q86T75 865 aa19.87■□□□□ 0.77
SCAMP4-201ENST00000316097 TXNRD3Q86VQ6 643 aa19.87■□□□□ 0.77
SCAMP4-201ENST00000316097 ABCF2Q9UG63 623 aa19.87■□□□□ 0.77
SCAMP4-201ENST00000316097 RGL2O15211 777 aa19.86■□□□□ 0.77
SCAMP4-201ENST00000316097 APPP05067 770 aa19.86■□□□□ 0.77
SCAMP4-201ENST00000316097 SERPINB2P05120 415 aa19.86■□□□□ 0.77
SCAMP4-201ENST00000316097 FAM160A1Q05DH4 1040 aa19.86■□□□□ 0.77
SCAMP4-201ENST00000316097 E4F1Q66K89 784 aaPredicted RBP19.86■□□□□ 0.77
SCAMP4-201ENST00000316097 LRRN4CLQ8ND94 238 aa19.86■□□□□ 0.77
SCAMP4-201ENST00000316097 FAM84BQ96KN1 310 aaPredicted RBP19.86■□□□□ 0.77
SCAMP4-201ENST00000316097 KCND1Q9NSA2 647 aa19.86■□□□□ 0.77
SCAMP4-201ENST00000316097 E7EWF7 191 aa19.86■□□□□ 0.77
SCAMP4-201ENST00000316097 ME1P48163 572 aa19.86■□□□□ 0.77
SCAMP4-201ENST00000316097 LRRFIP1Q32MZ4 808 aaKnown RBP19.86■□□□□ 0.77
SCAMP4-201ENST00000316097 SYT10Q6XYQ8 523 aa19.86■□□□□ 0.77
SCAMP4-201ENST00000316097 VPS37DQ86XT2 251 aa19.86■□□□□ 0.77
SCAMP4-201ENST00000316097 ENGASEQ8NFI3 743 aa19.86■□□□□ 0.77
SCAMP4-201ENST00000316097 TCRBV5S4A2TA0A5A2 114 aa19.85■□□□□ 0.77
SCAMP4-201ENST00000316097 SMARCC2Q8TAQ2 1214 aa19.85■□□□□ 0.77
SCAMP4-201ENST00000316097 RGS17Q9UGC6 210 aaPredicted RBP19.85■□□□□ 0.77
SCAMP4-201ENST00000316097 DENND2AQ9ULE3 1009 aa19.85■□□□□ 0.77
SCAMP4-201ENST00000316097 LAMB2P55268 1798 aa19.85■□□□□ 0.77
SCAMP4-201ENST00000316097 PPFIA3O75145 1194 aa19.85■□□□□ 0.77
SCAMP4-201ENST00000316097 ADRA2BP18089 450 aa19.85■□□□□ 0.77
SCAMP4-201ENST00000316097 DDR1Q08345 913 aa19.85■□□□□ 0.77
SCAMP4-201ENST00000316097 PPP1R13BQ96KQ4 1090 aa19.85■□□□□ 0.77
SCAMP4-201ENST00000316097 GPR101Q96P66 508 aaPredicted RBP19.85■□□□□ 0.77
SCAMP4-201ENST00000316097 NAT10Q9H0A0 1025 aaKnown RBP19.85■□□□□ 0.77
SCAMP4-201ENST00000316097 BMS1Q14692 1282 aaKnown RBP19.84■□□□□ 0.77
SCAMP4-201ENST00000316097 MIGA1Q8NAN2 632 aa19.84■□□□□ 0.77
SCAMP4-201ENST00000316097 NSUN7Q8NE18 718 aaKnown RBP19.84■□□□□ 0.77
SCAMP4-201ENST00000316097 OSBPL5Q9H0X9 879 aaPredicted RBP19.84■□□□□ 0.77
SCAMP4-201ENST00000316097 LRP2BPQ9P2M1 347 aa19.84■□□□□ 0.77
SCAMP4-201ENST00000316097 H2AFXP16104 143 aaPredicted RBP19.84■□□□□ 0.77
SCAMP4-201ENST00000316097 GUCY1B3Q02153 619 aa19.84■□□□□ 0.77
SCAMP4-201ENST00000316097 NAA16Q6N069 864 aaPredicted RBP19.84■□□□□ 0.77
SCAMP4-201ENST00000316097 TIGD1Q96MW7 591 aa19.84■□□□□ 0.77
SCAMP4-201ENST00000316097 L2HGDHQ9H9P8 463 aa19.84■□□□□ 0.77
SCAMP4-201ENST00000316097 PTPDC1A2A3K4 754 aa19.83■□□□□ 0.77
SCAMP4-201ENST00000316097 SMC2O95347 1197 aa19.83■□□□□ 0.77
SCAMP4-201ENST00000316097 UBE4AQ14139 1066 aa19.83■□□□□ 0.77
SCAMP4-201ENST00000316097 TMC6Q7Z403 805 aa19.83■□□□□ 0.77
SCAMP4-201ENST00000316097 NKX2-3Q8TAU0 364 aa19.83■□□□□ 0.77
SCAMP4-201ENST00000316097 NOL10Q9BSC4 688 aaKnown RBP19.83■□□□□ 0.77
SCAMP4-201ENST00000316097 ARMT1Q9H993 441 aa19.83■□□□□ 0.77
SCAMP4-201ENST00000316097 GPHNQ9NQX3 736 aaPredicted RBP19.83■□□□□ 0.77
SCAMP4-201ENST00000316097 UBE3CQ15386 1083 aa19.83■□□□□ 0.76
SCAMP4-201ENST00000316097 POTEAQ6S8J7 498 aa19.83■□□□□ 0.76
SCAMP4-201ENST00000316097 ZNF396Q96N95 335 aaPredicted RBP19.83■□□□□ 0.76
SCAMP4-201ENST00000316097 PRKAB2O43741 272 aa19.82■□□□□ 0.76
SCAMP4-201ENST00000316097 CLCN6P51797 869 aa19.82■□□□□ 0.76
SCAMP4-201ENST00000316097 MAP3K12Q12852 859 aa19.82■□□□□ 0.76
SCAMP4-201ENST00000316097 CAVIN4Q5BKX8 364 aa19.82■□□□□ 0.76
SCAMP4-201ENST00000316097 ADGRA1Q86SQ6 560 aa19.82■□□□□ 0.76
SCAMP4-201ENST00000316097 SDF4Q9BRK5 362 aa19.82■□□□□ 0.76
SCAMP4-201ENST00000316097 INCENPQ9NQS7 918 aa19.82■□□□□ 0.76
SCAMP4-201ENST00000316097 IMPACTQ9P2X3 320 aa19.82■□□□□ 0.76
SCAMP4-201ENST00000316097 TNRC6CQ9HCJ0 1690 aaKnown RBP19.82■□□□□ 0.76
SCAMP4-201ENST00000316097 PFKFB2O60825 505 aa19.82■□□□□ 0.76
SCAMP4-201ENST00000316097 CTDNEP1O95476 244 aa19.82■□□□□ 0.76
SCAMP4-201ENST00000316097 ARMCX5Q6P1M9 558 aa19.82■□□□□ 0.76
SCAMP4-201ENST00000316097 COL23A1Q86Y22 540 aaPredicted RBP19.82■□□□□ 0.76
SCAMP4-201ENST00000316097 AIDAQ96BJ3 306 aa19.82■□□□□ 0.76
SCAMP4-201ENST00000316097 LLPHQ9BRT6 129 aaKnown RBP19.82■□□□□ 0.76
SCAMP4-201ENST00000316097 XPO4Q9C0E2 1151 aaKnown RBP19.82■□□□□ 0.76
SCAMP4-201ENST00000316097 ANKIB1Q9P2G1 1089 aa19.82■□□□□ 0.76
SCAMP4-201ENST00000316097 MBD4O95243 580 aa19.81■□□□□ 0.76
SCAMP4-201ENST00000316097 CCT2P78371 535 aaKnown RBP19.81■□□□□ 0.76
SCAMP4-201ENST00000316097 IRX5P78411 483 aaPredicted RBP19.81■□□□□ 0.76
SCAMP4-201ENST00000316097 IFNKQ9P0W0 207 aa19.81■□□□□ 0.76
SCAMP4-201ENST00000316097 NAP1L2Q9ULW6 460 aaPredicted RBP19.81■□□□□ 0.76
SCAMP4-201ENST00000316097 CASZ1Q86V15 1759 aa19.81■□□□□ 0.76
SCAMP4-201ENST00000316097 SFPQP23246 707 aaKnown RBP eCLIP19.81■□□□□ 0.76
SCAMP4-201ENST00000316097 APOBRQ0VD83 1088 aa19.81■□□□□ 0.76
SCAMP4-201ENST00000316097 STK11IPQ8N1F8 1099 aa19.81■□□□□ 0.76
SCAMP4-201ENST00000316097 CCDC150Q8NCX0 1101 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms