RNA–Protein interactions for RNA: ENST00000314567.7

CDPF1-201, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDPF1, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-201ENST00000314567 CDK5RAP2Q96SN8 1893 aa29.41■■■□□ 2.3
CDPF1-201ENST00000314567 RBM5P52756 815 aaKnown RBP eCLIP29.4■■■□□ 2.3
CDPF1-201ENST00000314567 SLF2Q8IX21 1173 aa29.4■■■□□ 2.3
CDPF1-201ENST00000314567 TCEANC2Q96MN5 208 aa29.4■■■□□ 2.3
CDPF1-201ENST00000314567 NOL10Q9BSC4 688 aaKnown RBP29.4■■■□□ 2.3
CDPF1-201ENST00000314567 GJA3Q9Y6H8 435 aa29.4■■■□□ 2.3
CDPF1-201ENST00000314567 SMIM22K7EJ46 135 aa29.4■■■□□ 2.3
CDPF1-201ENST00000314567 IGSF3O75054 1194 aa29.4■■■□□ 2.3
CDPF1-201ENST00000314567 BAG3O95817 575 aa29.4■■■□□ 2.3
CDPF1-201ENST00000314567 GNAT2P19087 354 aa29.4■■■□□ 2.3
CDPF1-201ENST00000314567 RHBDL3P58872 404 aa29.4■■■□□ 2.3
CDPF1-201ENST00000314567 PPP4CP60510 307 aa29.4■■■□□ 2.3
CDPF1-201ENST00000314567 ALX1Q15699 326 aa29.4■■■□□ 2.3
CDPF1-201ENST00000314567 TMED8Q6PL24 325 aaPredicted RBP29.4■■■□□ 2.3
CDPF1-201ENST00000314567 Q6ZUG5 572 aa29.4■■■□□ 2.3
CDPF1-201ENST00000314567 ZNF213O14771 459 aa29.39■■■□□ 2.3
CDPF1-201ENST00000314567 EXOSC10Q01780 885 aaKnown RBP29.39■■■□□ 2.3
CDPF1-201ENST00000314567 APOBEC3HQ6NTF7 200 aaKnown RBP29.39■■■□□ 2.3
CDPF1-201ENST00000314567 CRNKL1Q9BZJ0 848 aaKnown RBP29.39■■■□□ 2.3
CDPF1-201ENST00000314567 RNF181Q9P0P0 153 aa29.39■■■□□ 2.3
CDPF1-201ENST00000314567 WDR33Q9C0J8 1336 aaKnown RBP29.39■■■□□ 2.29
CDPF1-201ENST00000314567 TDO2P48775 406 aa29.38■■■□□ 2.29
CDPF1-201ENST00000314567 EIF6P56537 245 aaKnown RBP29.38■■■□□ 2.29
CDPF1-201ENST00000314567 EVX2Q03828 476 aa29.38■■■□□ 2.29
CDPF1-201ENST00000314567 SLC4A8Q2Y0W8 1093 aa29.38■■■□□ 2.29
CDPF1-201ENST00000314567 AGXT2Q9BYV1 514 aa29.38■■■□□ 2.29
CDPF1-201ENST00000314567 NAPBQ9H115 298 aa29.38■■■□□ 2.29
CDPF1-201ENST00000314567 HHIPL2Q6UWX4 724 aa29.38■■■□□ 2.29
CDPF1-201ENST00000314567 FBXL16Q8N461 479 aa29.38■■■□□ 2.29
CDPF1-201ENST00000314567 TGFBRAP1Q8WUH2 860 aa29.38■■■□□ 2.29
CDPF1-201ENST00000314567 MYO3BQ8WXR4 1341 aa29.37■■■□□ 2.29
CDPF1-201ENST00000314567 CYP2D7A0A087X1C5 515 aa29.37■■■□□ 2.29
CDPF1-201ENST00000314567 PDIA4P13667 645 aaKnown RBP29.37■■■□□ 2.29
CDPF1-201ENST00000314567 ST3GAL1Q11201 340 aa29.37■■■□□ 2.29
CDPF1-201ENST00000314567 TNIP1Q15025 636 aa29.37■■■□□ 2.29
CDPF1-201ENST00000314567 CFAP100Q494V2 611 aa29.36■■■□□ 2.29
CDPF1-201ENST00000314567 TEX11Q8IYF3 940 aa29.36■■■□□ 2.29
CDPF1-201ENST00000314567 STK11IPQ8N1F8 1099 aa29.36■■■□□ 2.29
CDPF1-201ENST00000314567 NBPF3Q9H094 633 aa29.36■■■□□ 2.29
CDPF1-201ENST00000314567 FGD1P98174 961 aa29.36■■■□□ 2.29
CDPF1-201ENST00000314567 C9orf131Q5VYM1 1079 aa29.36■■■□□ 2.29
CDPF1-201ENST00000314567 MAPKAPK5Q8IW41 473 aa29.36■■■□□ 2.29
CDPF1-201ENST00000314567 ZDHHC15Q96MV8 337 aa29.36■■■□□ 2.29
CDPF1-201ENST00000314567 DCP1AQ9NPI6 582 aaPredicted RBP29.36■■■□□ 2.29
CDPF1-201ENST00000314567 TIAM2Q8IVF5 1701 aa29.35■■■□□ 2.29
CDPF1-201ENST00000314567 USP5P45974 858 aa29.35■■■□□ 2.29
CDPF1-201ENST00000314567 CACNB3P54284 484 aa29.35■■■□□ 2.29
CDPF1-201ENST00000314567 CDC42EP5Q6NZY7 148 aa29.35■■■□□ 2.29
CDPF1-201ENST00000314567 AGBL3Q8NEM8 1001 aa29.35■■■□□ 2.29
CDPF1-201ENST00000314567 NACAP1Q9BZK3 213 aa29.35■■■□□ 2.29
CDPF1-201ENST00000314567 USP40Q9NVE5 1235 aa29.35■■■□□ 2.29
CDPF1-201ENST00000314567 SERPINA10Q9UK55 444 aa29.35■■■□□ 2.29
CDPF1-201ENST00000314567 WDR19Q8NEZ3 1342 aa29.35■■■□□ 2.29
CDPF1-201ENST00000314567 USP17L8P0C7I0 530 aa29.34■■■□□ 2.29
CDPF1-201ENST00000314567 NCOA7Q8NI08 942 aa29.34■■■□□ 2.29
CDPF1-201ENST00000314567 INCENPQ9NQS7 918 aa29.34■■■□□ 2.29
CDPF1-201ENST00000314567 GMPSP49915 693 aaPredicted RBP29.34■■■□□ 2.29
CDPF1-201ENST00000314567 CTDSPL2Q05D32 466 aa29.34■■■□□ 2.29
CDPF1-201ENST00000314567 SKOR2Q2VWA4 1001 aaPredicted RBP29.34■■■□□ 2.29
CDPF1-201ENST00000314567 PRMT6Q96LA8 375 aaPredicted RBP29.34■■■□□ 2.29
CDPF1-201ENST00000314567 TRAK2O60296 914 aa29.33■■■□□ 2.29
CDPF1-201ENST00000314567 CYP2D6P10635 497 aa29.33■■■□□ 2.29
CDPF1-201ENST00000314567 GJB2P29033 226 aa29.33■■■□□ 2.29
CDPF1-201ENST00000314567 HDLBPQ00341 1268 aaKnown RBP29.33■■■□□ 2.29
CDPF1-201ENST00000314567 TBC1D10CQ8IV04 446 aa29.33■■■□□ 2.29
CDPF1-201ENST00000314567 NECAB1Q8N987 351 aa29.33■■■□□ 2.29
CDPF1-201ENST00000314567 BRF1Q92994 677 aa29.33■■■□□ 2.29
CDPF1-201ENST00000314567 MINDY4BA8MYZ0 360 aa29.32■■■□□ 2.28
CDPF1-201ENST00000314567 PICALMQ13492 652 aa29.32■■■□□ 2.28
CDPF1-201ENST00000314567 GSE1Q14687 1217 aa29.32■■■□□ 2.28
CDPF1-201ENST00000314567 RALYLQ86SE5 291 aaKnown RBP29.32■■■□□ 2.28
CDPF1-201ENST00000314567 GTF3C6Q969F1 213 aa29.32■■■□□ 2.28
CDPF1-201ENST00000314567 MRIQ9BWK5 157 aa29.32■■■□□ 2.28
CDPF1-201ENST00000314567 MKRN1Q9UHC7 482 aaKnown RBP29.32■■■□□ 2.28
CDPF1-201ENST00000314567 SAP30BPQ9UHR5 308 aaKnown RBP29.32■■■□□ 2.28
CDPF1-201ENST00000314567 TACC3Q9Y6A5 838 aa29.32■■■□□ 2.28
CDPF1-201ENST00000314567 ECM29Q5VYK3 1845 aa29.32■■■□□ 2.28
CDPF1-201ENST00000314567 NAV1Q8NEY1 1877 aa29.32■■■□□ 2.28
CDPF1-201ENST00000314567 CTR9Q6PD62 1173 aa29.31■■■□□ 2.28
CDPF1-201ENST00000314567 MB21D2Q8IYB1 491 aaPredicted RBP29.31■■■□□ 2.28
CDPF1-201ENST00000314567 OGFOD1Q8N543 542 aa29.31■■■□□ 2.28
CDPF1-201ENST00000314567 NKX2-3Q8TAU0 364 aa29.31■■■□□ 2.28
CDPF1-201ENST00000314567 DDX4Q9NQI0 724 aaKnown RBP29.31■■■□□ 2.28
CDPF1-201ENST00000314567 USP17L12C9JPN9 530 aa29.31■■■□□ 2.28
CDPF1-201ENST00000314567 USP17L21D6R901 530 aa29.31■■■□□ 2.28
CDPF1-201ENST00000314567 WDHD1O75717 1129 aaPredicted RBP29.31■■■□□ 2.28
CDPF1-201ENST00000314567 EGFRP00533 1210 aa29.31■■■□□ 2.28
CDPF1-201ENST00000314567 MCM5P33992 734 aa29.31■■■□□ 2.28
CDPF1-201ENST00000314567 TDRD3Q9H7E2 651 aaKnown RBP29.31■■■□□ 2.28
CDPF1-201ENST00000314567 FOCADQ5VW36 1801 aa29.3■■■□□ 2.28
CDPF1-201ENST00000314567 FLT1P17948 1338 aa29.3■■■□□ 2.28
CDPF1-201ENST00000314567 STX6O43752 255 aa29.3■■■□□ 2.28
CDPF1-201ENST00000314567 NFIAQ12857 509 aa29.3■■■□□ 2.28
CDPF1-201ENST00000314567 TRDNQ13061 729 aa29.3■■■□□ 2.28
CDPF1-201ENST00000314567 CHMP4CQ96CF2 233 aa29.3■■■□□ 2.28
CDPF1-201ENST00000314567 ATP8A2Q9NTI2 1148 aa29.3■■■□□ 2.28
CDPF1-201ENST00000314567 MCM9Q9NXL9 1143 aa29.3■■■□□ 2.28
CDPF1-201ENST00000314567 HDAC9Q9UKV0 1011 aa29.3■■■□□ 2.28
CDPF1-201ENST00000314567 PLCG2P16885 1265 aa29.29■■■□□ 2.28
CDPF1-201ENST00000314567 SYT1P21579 422 aa29.29■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms