RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 GTF2IP78347 998 aa7.06□□□□□ -1.28
PRKDC-201ENST00000314191 PCDHA7Q9UN72 937 aa7.06□□□□□ -1.28
PRKDC-201ENST00000314191 AMPD3Q01432 767 aa7.06□□□□□ -1.28
PRKDC-201ENST00000314191 ENOX2Q16206 610 aaKnown RBP7.06□□□□□ -1.28
PRKDC-201ENST00000314191 APOA5Q6Q788 366 aa7.06□□□□□ -1.28
PRKDC-201ENST00000314191 FANCBQ8NB91 859 aa7.06□□□□□ -1.28
PRKDC-201ENST00000314191 PPP1R9BQ96SB3 815 aa7.06□□□□□ -1.28
PRKDC-201ENST00000314191 CBX1P83916 185 aa7.06□□□□□ -1.28
PRKDC-201ENST00000314191 GPCPD1Q9NPB8 672 aa7.06□□□□□ -1.28
PRKDC-201ENST00000314191 CYP2E1P05181 493 aaPredicted RBP7.06□□□□□ -1.28
PRKDC-201ENST00000314191 ZNF827Q17R98 1081 aa7.06□□□□□ -1.28
PRKDC-201ENST00000314191 DOK7Q18PE1 504 aa7.06□□□□□ -1.28
PRKDC-201ENST00000314191 KIF4BQ2VIQ3 1234 aa7.06□□□□□ -1.28
PRKDC-201ENST00000314191 FKBP15Q5T1M5 1219 aa7.06□□□□□ -1.28
PRKDC-201ENST00000314191 PFKFB1P16118 471 aa7.06□□□□□ -1.28
PRKDC-201ENST00000314191 RRP36Q96EU6 259 aaKnown RBP7.06□□□□□ -1.28
PRKDC-201ENST00000314191 RESTQ13127 1097 aa7.06□□□□□ -1.28
PRKDC-201ENST00000314191 POLR2DO15514 142 aaKnown RBP7.06□□□□□ -1.28
PRKDC-201ENST00000314191 CALML3P27482 149 aa7.06□□□□□ -1.28
PRKDC-201ENST00000314191 MTIF2P46199 727 aaKnown RBP7.06□□□□□ -1.28
PRKDC-201ENST00000314191 PNOCQ13519 176 aa7.06□□□□□ -1.28
PRKDC-201ENST00000314191 TDRD12Q587J7 1177 aaKnown RBP7.06□□□□□ -1.28
PRKDC-201ENST00000314191 AIFM3Q96NN9 605 aa7.06□□□□□ -1.28
PRKDC-201ENST00000314191 CLIC6Q96NY7 704 aa7.06□□□□□ -1.28
PRKDC-201ENST00000314191 ADALQ6DHV7 355 aa7.05□□□□□ -1.28
PRKDC-201ENST00000314191 RASGRF1Q13972 1273 aa7.05□□□□□ -1.28
PRKDC-201ENST00000314191 WDR66Q8TBY9 1149 aa7.05□□□□□ -1.28
PRKDC-201ENST00000314191 CYP2D7A0A087X1C5 515 aa7.05□□□□□ -1.28
PRKDC-201ENST00000314191 PLCG2P16885 1265 aa7.05□□□□□ -1.28
PRKDC-201ENST00000314191 DTHD1Q6ZMT9 781 aa7.05□□□□□ -1.28
PRKDC-201ENST00000314191 CCDC150Q8NCX0 1101 aa7.05□□□□□ -1.28
PRKDC-201ENST00000314191 TBC1D10CQ8IV04 446 aa7.05□□□□□ -1.28
PRKDC-201ENST00000314191 ZSCAN10Q96SZ4 725 aaPredicted RBP7.05□□□□□ -1.28
PRKDC-201ENST00000314191 ELP1O95163 1332 aa7.05□□□□□ -1.28
PRKDC-201ENST00000314191 CEP135Q66GS9 1140 aa7.05□□□□□ -1.28
PRKDC-201ENST00000314191 MSL1Q68DK7 614 aa7.05□□□□□ -1.28
PRKDC-201ENST00000314191 STOX1Q6ZVD7 989 aa7.05□□□□□ -1.28
PRKDC-201ENST00000314191 KIAA1328Q86T90 577 aa7.05□□□□□ -1.28
PRKDC-201ENST00000314191 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.05□□□□□ -1.28
PRKDC-201ENST00000314191 GOLGA8HP0CJ92 632 aa7.05□□□□□ -1.28
PRKDC-201ENST00000314191 ZNF75DP51815 510 aa7.05□□□□□ -1.28
PRKDC-201ENST00000314191 RBM26Q5T8P6 1007 aaKnown RBP7.05□□□□□ -1.28
PRKDC-201ENST00000314191 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.05□□□□□ -1.28
PRKDC-201ENST00000314191 V9GYY5 206 aaPredicted RBP7.05□□□□□ -1.28
PRKDC-201ENST00000314191 APBA3O96018 575 aa7.05□□□□□ -1.28
PRKDC-201ENST00000314191 TRIM28Q13263 835 aaKnown RBP7.05□□□□□ -1.28
PRKDC-201ENST00000314191 HSP90B2PQ58FF3 399 aa7.05□□□□□ -1.28
PRKDC-201ENST00000314191 CCDC181Q5TID7 509 aa7.05□□□□□ -1.28
PRKDC-201ENST00000314191 CACNA2D4Q7Z3S7 1137 aa7.05□□□□□ -1.28
PRKDC-201ENST00000314191 ZNF804BA4D1E1 1349 aa7.05□□□□□ -1.28
PRKDC-201ENST00000314191 TCERG1LQ5VWI1 586 aa7.05□□□□□ -1.28
PRKDC-201ENST00000314191 STRBPQ96SI9 672 aaKnown RBP7.05□□□□□ -1.28
PRKDC-201ENST00000314191 ZMYM6O95789 1325 aa7.05□□□□□ -1.28
PRKDC-201ENST00000314191 EXOC1Q9NV70 894 aa7.04□□□□□ -1.28
PRKDC-201ENST00000314191 KIF2AO00139 706 aaPredicted RBP7.04□□□□□ -1.28
PRKDC-201ENST00000314191 TNNI2P48788 182 aa7.04□□□□□ -1.28
PRKDC-201ENST00000314191 TTC38Q5R3I4 469 aa7.04□□□□□ -1.28
PRKDC-201ENST00000314191 EYA3Q99504 573 aa7.04□□□□□ -1.28
PRKDC-201ENST00000314191 TSG101Q99816 390 aa7.04□□□□□ -1.28
PRKDC-201ENST00000314191 MAPK8IP1Q9UQF2 711 aa7.04□□□□□ -1.28
PRKDC-201ENST00000314191 PARP1P09874 1014 aaKnown RBP7.04□□□□□ -1.28
PRKDC-201ENST00000314191 CELF1Q92879 486 aaKnown RBP7.04□□□□□ -1.28
PRKDC-201ENST00000314191 PYM1Q9BRP8 204 aaKnown RBP7.04□□□□□ -1.28
PRKDC-201ENST00000314191 TEX35Q5T0J7 233 aa7.04□□□□□ -1.28
PRKDC-201ENST00000314191 TRMT44Q8IYL2 757 aaKnown RBP7.04□□□□□ -1.28
PRKDC-201ENST00000314191 GPR101Q96P66 508 aaPredicted RBP7.04□□□□□ -1.28
PRKDC-201ENST00000314191 ARPP21Q9UBL0 812 aaPredicted RBP7.04□□□□□ -1.28
PRKDC-201ENST00000314191 DNAI1Q9UI46 699 aa7.04□□□□□ -1.28
PRKDC-201ENST00000314191 USP42Q9H9J4 1324 aaKnown RBP7.04□□□□□ -1.28
PRKDC-201ENST00000314191 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.04□□□□□ -1.28
PRKDC-201ENST00000314191 CASQ1P31415 396 aa7.04□□□□□ -1.28
PRKDC-201ENST00000314191 NDUFA8P51970 172 aa7.04□□□□□ -1.28
PRKDC-201ENST00000314191 GNG11P61952 73 aa7.04□□□□□ -1.28
PRKDC-201ENST00000314191 DPP8Q6V1X1 898 aaPredicted RBP7.04□□□□□ -1.28
PRKDC-201ENST00000314191 IQUBQ8NA54 791 aa7.04□□□□□ -1.28
PRKDC-201ENST00000314191 QTRT2Q9H974 415 aaKnown RBP7.04□□□□□ -1.28
PRKDC-201ENST00000314191 JAKMIP3Q5VZ66 844 aa7.04□□□□□ -1.28
PRKDC-201ENST00000314191 CUL5Q93034 780 aa7.04□□□□□ -1.28
PRKDC-201ENST00000314191 RCOR1Q9UKL0 485 aa7.04□□□□□ -1.28
PRKDC-201ENST00000314191 RIMBP3CA6NJZ7 1639 aa7.04□□□□□ -1.28
PRKDC-201ENST00000314191 RIMBP3BA6NNM3 1639 aa7.04□□□□□ -1.28
PRKDC-201ENST00000314191 RIMBP3Q9UFD9 1639 aa7.04□□□□□ -1.28
PRKDC-201ENST00000314191 DNA2P51530 1060 aa7.04□□□□□ -1.28
PRKDC-201ENST00000314191 ZSWIM4Q9H7M6 989 aa7.04□□□□□ -1.28
PRKDC-201ENST00000314191 ZSWIM5Q9P217 1185 aa7.04□□□□□ -1.28
PRKDC-201ENST00000314191 NRKQ7Z2Y5 1582 aa7.04□□□□□ -1.28
PRKDC-201ENST00000314191 A0A0G2JLW4 131 aa7.04□□□□□ -1.28
PRKDC-201ENST00000314191 KIF5CO60282 957 aa7.04□□□□□ -1.28
PRKDC-201ENST00000314191 TXKP42681 527 aa7.04□□□□□ -1.28
PRKDC-201ENST00000314191 ZNF397Q8NF99 534 aaPredicted RBP7.04□□□□□ -1.28
PRKDC-201ENST00000314191 RMND1Q9NWS8 449 aa7.04□□□□□ -1.28
PRKDC-201ENST00000314191 NLRP12P59046 1061 aa7.04□□□□□ -1.28
PRKDC-201ENST00000314191 NOSTRINQ8IVI9 506 aa7.04□□□□□ -1.28
PRKDC-201ENST00000314191 KIF23Q02241 960 aaPredicted RBP7.04□□□□□ -1.28
PRKDC-201ENST00000314191 UIMC1Q96RL1 719 aa7.04□□□□□ -1.28
PRKDC-201ENST00000314191 SERPINB2P05120 415 aa7.04□□□□□ -1.28
PRKDC-201ENST00000314191 ASIC1P78348 528 aa7.04□□□□□ -1.28
PRKDC-201ENST00000314191 FANCCQ00597 558 aa7.04□□□□□ -1.28
PRKDC-201ENST00000314191 SKIDA1Q1XH10 827 aa7.04□□□□□ -1.28
PRKDC-201ENST00000314191 CT47A1Q5JQC4 288 aaPredicted RBP7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms