RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 GRIN1Q05586 938 aa29.28■■■□□ 2.28
HOXB3-201ENST00000311626 TRIM29Q14134 588 aa29.28■■■□□ 2.28
HOXB3-201ENST00000311626 LONRF3Q496Y0 759 aa29.28■■■□□ 2.28
HOXB3-201ENST00000311626 LCORLQ8N3X6 602 aa29.28■■■□□ 2.28
HOXB3-201ENST00000311626 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.28■■■□□ 2.28
HOXB3-201ENST00000311626 BTBD18B2RXH4 712 aa29.27■■■□□ 2.28
HOXB3-201ENST00000311626 HSD3B7Q9H2F3 369 aa29.27■■■□□ 2.28
HOXB3-201ENST00000311626 FANCCQ00597 558 aa29.27■■■□□ 2.28
HOXB3-201ENST00000311626 TMEM87BQ96K49 555 aa29.27■■■□□ 2.28
HOXB3-201ENST00000311626 GSG1L2A8MUP6 293 aa29.26■■■□□ 2.28
HOXB3-201ENST00000311626 FOXP4Q8IVH2 680 aaPredicted RBP29.26■■■□□ 2.28
HOXB3-201ENST00000311626 MPHOSPH8Q99549 860 aa29.26■■■□□ 2.28
HOXB3-201ENST00000311626 E4F1Q66K89 784 aaPredicted RBP29.26■■■□□ 2.27
HOXB3-201ENST00000311626 OSBPL5Q9H0X9 879 aaPredicted RBP29.26■■■□□ 2.27
HOXB3-201ENST00000311626 ZNF215Q9UL58 517 aaPredicted RBP29.26■■■□□ 2.27
HOXB3-201ENST00000311626 WTIPA6NIX2 430 aaPredicted RBP29.25■■■□□ 2.27
HOXB3-201ENST00000311626 NPHP1O15259 732 aa29.25■■■□□ 2.27
HOXB3-201ENST00000311626 SSRP1Q08945 709 aaKnown RBP29.25■■■□□ 2.27
HOXB3-201ENST00000311626 BPIFA3Q9BQP9 254 aa29.25■■■□□ 2.27
HOXB3-201ENST00000311626 HPSEQ9Y251 543 aa29.25■■■□□ 2.27
HOXB3-201ENST00000311626 ATRNO75882 1429 aa29.25■■■□□ 2.27
HOXB3-201ENST00000311626 DDX60Q8IY21 1712 aaKnown RBP29.25■■■□□ 2.27
HOXB3-201ENST00000311626 SLC5A1P13866 664 aa29.25■■■□□ 2.27
HOXB3-201ENST00000311626 TDO2P48775 406 aa29.25■■■□□ 2.27
HOXB3-201ENST00000311626 MAP3K12Q12852 859 aa29.25■■■□□ 2.27
HOXB3-201ENST00000311626 ZNF34Q8IZ26 560 aa29.25■■■□□ 2.27
HOXB3-201ENST00000311626 METTL16Q86W50 562 aaKnown RBP29.24■■■□□ 2.27
HOXB3-201ENST00000311626 SLC4A4Q9Y6R1 1079 aa29.24■■■□□ 2.27
HOXB3-201ENST00000311626 ITGB4P16144 1822 aa29.24■■■□□ 2.27
HOXB3-201ENST00000311626 GSDMDP57764 484 aa29.24■■■□□ 2.27
HOXB3-201ENST00000311626 BCL9O00512 1426 aa29.24■■■□□ 2.27
HOXB3-201ENST00000311626 SLIT2O94813 1529 aa29.24■■■□□ 2.27
HOXB3-201ENST00000311626 AKNAD1Q5T1N1 836 aa29.23■■■□□ 2.27
HOXB3-201ENST00000311626 MFSD6Q6ZSS7 791 aa29.23■■■□□ 2.27
HOXB3-201ENST00000311626 NUP133Q8WUM0 1156 aa29.23■■■□□ 2.27
HOXB3-201ENST00000311626 RESP18Q5W5W9 173 aa29.23■■■□□ 2.27
HOXB3-201ENST00000311626 ACSBG1Q96GR2 724 aa29.23■■■□□ 2.27
HOXB3-201ENST00000311626 MROH5Q6ZUA9 1318 aa29.22■■■□□ 2.27
HOXB3-201ENST00000311626 PPP6R2O75170 966 aa29.22■■■□□ 2.27
HOXB3-201ENST00000311626 SFPQP23246 707 aaKnown RBP eCLIP29.22■■■□□ 2.27
HOXB3-201ENST00000311626 SGMS1Q86VZ5 419 aa29.22■■■□□ 2.27
HOXB3-201ENST00000311626 ABCA3Q99758 1704 aa29.22■■■□□ 2.27
HOXB3-201ENST00000311626 TPM4P67936 248 aa29.22■■■□□ 2.27
HOXB3-201ENST00000311626 PDE4BQ07343 736 aa29.22■■■□□ 2.27
HOXB3-201ENST00000311626 NR5A1Q13285 461 aa29.22■■■□□ 2.27
HOXB3-201ENST00000311626 CNNM3Q8NE01 707 aa29.22■■■□□ 2.27
HOXB3-201ENST00000311626 KCNH3Q9ULD8 1083 aa29.22■■■□□ 2.27
HOXB3-201ENST00000311626 PCDHA5Q9Y5H7 936 aa29.22■■■□□ 2.27
HOXB3-201ENST00000311626 TMEM232C9JQI7 657 aa29.21■■■□□ 2.27
HOXB3-201ENST00000311626 TOB1P50616 345 aaPredicted RBP29.21■■■□□ 2.27
HOXB3-201ENST00000311626 GRAMD1CQ8IYS0 662 aa29.21■■■□□ 2.27
HOXB3-201ENST00000311626 TUBE1Q9UJT0 475 aa29.21■■■□□ 2.27
HOXB3-201ENST00000311626 NUP98P52948 1817 aa29.21■■■□□ 2.27
HOXB3-201ENST00000311626 EXOC5O00471 708 aa29.21■■■□□ 2.27
HOXB3-201ENST00000311626 SERPINC1P01008 464 aa29.21■■■□□ 2.27
HOXB3-201ENST00000311626 JMYQ8N9B5 988 aa29.21■■■□□ 2.27
HOXB3-201ENST00000311626 IMPACTQ9P2X3 320 aa29.21■■■□□ 2.27
HOXB3-201ENST00000311626 MYH3P11055 1940 aa29.2■■■□□ 2.27
HOXB3-201ENST00000311626 DIS3L2Q8IYB7 885 aaKnown RBP29.2■■■□□ 2.27
HOXB3-201ENST00000311626 SDR42E1Q8WUS8 393 aa29.2■■■□□ 2.27
HOXB3-201ENST00000311626 hCG_1642624A0A1W2PR95 340 aa29.2■■■□□ 2.26
HOXB3-201ENST00000311626 ALX1Q15699 326 aa29.2■■■□□ 2.26
HOXB3-201ENST00000311626 SMAP1Q8IYB5 467 aaPredicted RBP29.2■■■□□ 2.26
HOXB3-201ENST00000311626 PPP1R13BQ96KQ4 1090 aa29.2■■■□□ 2.26
HOXB3-201ENST00000311626 FANCLQ9NW38 375 aa29.2■■■□□ 2.26
HOXB3-201ENST00000311626 LRP6O75581 1613 aa29.2■■■□□ 2.26
HOXB3-201ENST00000311626 MINDY4BA8MYZ0 360 aa29.19■■■□□ 2.26
HOXB3-201ENST00000311626 FMNL1O95466 1100 aaPredicted RBP29.19■■■□□ 2.26
HOXB3-201ENST00000311626 BMP6P22004 513 aa29.19■■■□□ 2.26
HOXB3-201ENST00000311626 UBASH3AP57075 661 aa29.19■■■□□ 2.26
HOXB3-201ENST00000311626 OXER1Q8TDS5 423 aa29.19■■■□□ 2.26
HOXB3-201ENST00000311626 LRP2BPQ9P2M1 347 aa29.19■■■□□ 2.26
HOXB3-201ENST00000311626 IGSF3O75054 1194 aa29.19■■■□□ 2.26
HOXB3-201ENST00000311626 IL6STP40189 918 aaPredicted RBP29.19■■■□□ 2.26
HOXB3-201ENST00000311626 ZNF827Q17R98 1081 aa29.19■■■□□ 2.26
HOXB3-201ENST00000311626 SYT10Q6XYQ8 523 aa29.19■■■□□ 2.26
HOXB3-201ENST00000311626 ADGRA1Q86SQ6 560 aa29.19■■■□□ 2.26
HOXB3-201ENST00000311626 NOSTRINQ8IVI9 506 aa29.19■■■□□ 2.26
HOXB3-201ENST00000311626 PDILTQ8N807 584 aa29.19■■■□□ 2.26
HOXB3-201ENST00000311626 LIFRP42702 1097 aa29.18■■■□□ 2.26
HOXB3-201ENST00000311626 WTAPQ15007 396 aa29.18■■■□□ 2.26
HOXB3-201ENST00000311626 CFAP100Q494V2 611 aa29.18■■■□□ 2.26
HOXB3-201ENST00000311626 KRBA2Q6ZNG9 492 aa29.18■■■□□ 2.26
HOXB3-201ENST00000311626 TIGD1Q96MW7 591 aa29.18■■■□□ 2.26
HOXB3-201ENST00000311626 ERVV-1B6SEH8 477 aa29.18■■■□□ 2.26
HOXB3-201ENST00000311626 RTN1Q16799 776 aa29.18■■■□□ 2.26
HOXB3-201ENST00000311626 LRRN4CLQ8ND94 238 aa29.18■■■□□ 2.26
HOXB3-201ENST00000311626 PKNOX2Q96KN3 472 aa29.18■■■□□ 2.26
HOXB3-201ENST00000311626 ABCF2Q9UG63 623 aa29.18■■■□□ 2.26
HOXB3-201ENST00000311626 PRR29P0C7W0 189 aa29.17■■■□□ 2.26
HOXB3-201ENST00000311626 KIF18AQ8NI77 898 aa29.17■■■□□ 2.26
HOXB3-201ENST00000311626 PCDHB6Q9Y5E3 794 aa29.17■■■□□ 2.26
HOXB3-201ENST00000311626 CUTAO60888 179 aa29.17■■■□□ 2.26
HOXB3-201ENST00000311626 ECM29Q5VYK3 1845 aa29.17■■■□□ 2.26
HOXB3-201ENST00000311626 MYL5Q02045 173 aa29.16■■■□□ 2.26
HOXB3-201ENST00000311626 CCDC150Q8NCX0 1101 aa29.16■■■□□ 2.26
HOXB3-201ENST00000311626 MMP1P03956 469 aa29.16■■■□□ 2.26
HOXB3-201ENST00000311626 USP49Q70CQ1 688 aa29.16■■■□□ 2.26
HOXB3-201ENST00000311626 KRI1Q8N9T8 703 aaKnown RBP29.16■■■□□ 2.26
HOXB3-201ENST00000311626 UTP14AQ9BVJ6 771 aaKnown RBP29.16■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms