RNA–Protein interactions for RNA: ENST00000310496.8

RFNG-201, Transcript of RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFNG, Length 1,828 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFNG-201ENST00000310496 ZBTB12Q9Y330 459 aaPredicted RBP27.64■■■□□ 2.02
RFNG-201ENST00000310496 PCDHAC2Q9Y5I4 1007 aa27.64■■■□□ 2.02
RFNG-201ENST00000310496 NEDD4P46934 1319 aa27.64■■■□□ 2.02
RFNG-201ENST00000310496 BAZ2AQ9UIF9 1905 aaKnown RBP27.64■■■□□ 2.02
RFNG-201ENST00000310496 TOB2Q14106 344 aaPredicted RBP27.64■■■□□ 2.01
RFNG-201ENST00000310496 CIAPIN1Q6FI81 312 aa27.64■■■□□ 2.01
RFNG-201ENST00000310496 MCM9Q9NXL9 1143 aa27.64■■■□□ 2.01
RFNG-201ENST00000310496 CDC42EP5Q6NZY7 148 aa27.63■■■□□ 2.01
RFNG-201ENST00000310496 MAPKAPK5Q8IW41 473 aa27.63■■■□□ 2.01
RFNG-201ENST00000310496 FLT1P17948 1338 aa27.63■■■□□ 2.01
RFNG-201ENST00000310496 USP17L8P0C7I0 530 aa27.62■■■□□ 2.01
RFNG-201ENST00000310496 EVX2Q03828 476 aa27.62■■■□□ 2.01
RFNG-201ENST00000310496 TRDNQ13061 729 aa27.62■■■□□ 2.01
RFNG-201ENST00000310496 ARHGAP27Q6ZUM4 889 aa27.62■■■□□ 2.01
RFNG-201ENST00000310496 RALYLQ86SE5 291 aaKnown RBP27.62■■■□□ 2.01
RFNG-201ENST00000310496 AGBL3Q8NEM8 1001 aa27.62■■■□□ 2.01
RFNG-201ENST00000310496 USP40Q9NVE5 1235 aa27.62■■■□□ 2.01
RFNG-201ENST00000310496 LIMCH1Q9UPQ0 1083 aa27.62■■■□□ 2.01
RFNG-201ENST00000310496 FZD9O00144 591 aa27.62■■■□□ 2.01
RFNG-201ENST00000310496 WDHD1O75717 1129 aaPredicted RBP27.62■■■□□ 2.01
RFNG-201ENST00000310496 CYP2D6P10635 497 aa27.62■■■□□ 2.01
RFNG-201ENST00000310496 LARP6Q9BRS8 491 aaKnown RBP27.62■■■□□ 2.01
RFNG-201ENST00000310496 CDK5RAP2Q96SN8 1893 aa27.62■■■□□ 2.01
RFNG-201ENST00000310496 UTRNP46939 3433 aa27.61■■■□□ 2.01
RFNG-201ENST00000310496 ANTXR2P58335 489 aa27.61■■■□□ 2.01
RFNG-201ENST00000310496 ANKRD1Q15327 319 aa27.61■■■□□ 2.01
RFNG-201ENST00000310496 MFSD6Q6ZSS7 791 aa27.61■■■□□ 2.01
RFNG-201ENST00000310496 AGXT2Q9BYV1 514 aa27.61■■■□□ 2.01
RFNG-201ENST00000310496 FGRP09769 529 aa27.6■■■□□ 2.01
RFNG-201ENST00000310496 YBX3P16989 372 aaKnown RBP eCLIP27.6■■■□□ 2.013e-7■□□□□ 9.4
RFNG-201ENST00000310496 C12orf60Q5U649 245 aa27.6■■■□□ 2.01
RFNG-201ENST00000310496 Q6ZUG5 572 aa27.6■■■□□ 2.01
RFNG-201ENST00000310496 SPRYD3Q8NCJ5 442 aa27.6■■■□□ 2.01
RFNG-201ENST00000310496 LRRC2Q9BYS8 371 aa27.6■■■□□ 2.01
RFNG-201ENST00000310496 RNF41Q9H4P4 317 aaPredicted RBP27.6■■■□□ 2.01
RFNG-201ENST00000310496 CNNM2Q9H8M5 875 aa27.6■■■□□ 2.01
RFNG-201ENST00000310496 B4E1Z4 1266 aa27.6■■■□□ 2.01
RFNG-201ENST00000310496 MCM5P33992 734 aa27.6■■■□□ 2.01
RFNG-201ENST00000310496 RBM5P52756 815 aaKnown RBP eCLIP27.6■■■□□ 2.011e-6■■■■■ 40.3
RFNG-201ENST00000310496 TNIP1Q15025 636 aa27.6■■■□□ 2.01
RFNG-201ENST00000310496 CFAP100Q494V2 611 aa27.6■■■□□ 2.01
RFNG-201ENST00000310496 CHST3Q7LGC8 479 aa27.6■■■□□ 2.01
RFNG-201ENST00000310496 FBXL16Q8N461 479 aa27.6■■■□□ 2.01
RFNG-201ENST00000310496 DDX60LQ5H9U9 1706 aaKnown RBP27.6■■■□□ 2.01
RFNG-201ENST00000310496 WDR19Q8NEZ3 1342 aa27.59■■■□□ 2.01
RFNG-201ENST00000310496 CUL4AQ13619 759 aa27.59■■■□□ 2.01
RFNG-201ENST00000310496 DDX4Q9NQI0 724 aaKnown RBP27.59■■■□□ 2.01
RFNG-201ENST00000310496 TPCN1Q9ULQ1 816 aa27.59■■■□□ 2.01
RFNG-201ENST00000310496 NAV1Q8NEY1 1877 aa27.58■■■□□ 2.01
RFNG-201ENST00000310496 PRC1O43663 620 aa27.58■■■□□ 2.01
RFNG-201ENST00000310496 CYB5R4Q7L1T6 521 aa27.58■■■□□ 2.01
RFNG-201ENST00000310496 STK11IPQ8N1F8 1099 aa27.58■■■□□ 2.01
RFNG-201ENST00000310496 KRT23Q9C075 422 aa27.58■■■□□ 2.01
RFNG-201ENST00000310496 LAMB1P07942 1786 aa27.58■■■□□ 2.01
RFNG-201ENST00000310496 LMNB1P20700 586 aa27.57■■■□□ 2
RFNG-201ENST00000310496 SAP30BPQ9UHR5 308 aaKnown RBP27.57■■■□□ 2
RFNG-201ENST00000310496 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.57■■■□□ 2
RFNG-201ENST00000310496 FOCADQ5VW36 1801 aa27.57■■■□□ 2
RFNG-201ENST00000310496 ROBO3Q96MS0 1386 aa27.57■■■□□ 2
RFNG-201ENST00000310496 LARGE1O95461 756 aa27.57■■■□□ 2
RFNG-201ENST00000310496 PCP11498 1178 aaKnown RBP27.57■■■□□ 2
RFNG-201ENST00000310496 HDAC9Q9UKV0 1011 aa27.57■■■□□ 2
RFNG-201ENST00000310496 PLCD1P51178 756 aa27.56■■■□□ 2
RFNG-201ENST00000310496 OGFOD1Q8N543 542 aa27.56■■■□□ 2
RFNG-201ENST00000310496 BRF1Q92994 677 aa27.56■■■□□ 2
RFNG-201ENST00000310496 PRMT6Q96LA8 375 aaPredicted RBP27.56■■■□□ 2
RFNG-201ENST00000310496 ZSWIM5Q9P217 1185 aa27.56■■■□□ 2
RFNG-201ENST00000310496 KDM4AO75164 1064 aa27.55■■■□□ 2
RFNG-201ENST00000310496 EIF6P56537 245 aaKnown RBP27.55■■■□□ 2
RFNG-201ENST00000310496 SLC4A8Q2Y0W8 1093 aa27.55■■■□□ 2
RFNG-201ENST00000310496 ZSCAN31Q96LW9 406 aaPredicted RBP27.55■■■□□ 2
RFNG-201ENST00000310496 NFIAQ12857 509 aa27.55■■■□□ 2
RFNG-201ENST00000310496 PICALMQ13492 652 aa27.55■■■□□ 2
RFNG-201ENST00000310496 ME3Q16798 604 aa27.55■■■□□ 2
RFNG-201ENST00000310496 AMOTL1Q8IY63 956 aa27.55■■■□□ 2
RFNG-201ENST00000310496 IDI2Q9BXS1 227 aa27.55■■■□□ 2
RFNG-201ENST00000310496 GPHNQ9NQX3 736 aaPredicted RBP27.55■■■□□ 2
RFNG-201ENST00000310496 SPDYE2BA6NHP3 402 aa27.54■■■□□ 2
RFNG-201ENST00000310496 POLR3DP05423 398 aaPredicted RBP27.54■■■□□ 2
RFNG-201ENST00000310496 HSP90AA1P07900 732 aaKnown RBP27.54■■■□□ 2
RFNG-201ENST00000310496 SPDYE6P0CI01 402 aa27.54■■■□□ 2
RFNG-201ENST00000310496 RPS12P25398 132 aaKnown RBP27.54■■■□□ 2
RFNG-201ENST00000310496 RRP12Q5JTH9 1297 aaKnown RBP27.54■■■□□ 2
RFNG-201ENST00000310496 ZNF541Q9H0D2 1346 aa27.54■■■□□ 2
RFNG-201ENST00000310496 ORC4O43929 436 aa27.53■■■□□ 2
RFNG-201ENST00000310496 SLC3A2P08195 630 aaKnown RBP27.53■■■□□ 2
RFNG-201ENST00000310496 FGD1P98174 961 aa27.53■■■□□ 2
RFNG-201ENST00000310496 MTMR14Q8NCE2 650 aa27.53■■■□□ 2
RFNG-201ENST00000310496 SLKQ9H2G2 1235 aaPredicted RBP27.53■■■□□ 2
RFNG-201ENST00000310496 TDRD3Q9H7E2 651 aaKnown RBP27.53■■■□□ 2
RFNG-201ENST00000310496 SH2B1Q9NRF2 756 aaPredicted RBP27.53■■■□□ 2
RFNG-201ENST00000310496 TOMM22Q9NS69 142 aa27.53■■■□□ 2
RFNG-201ENST00000310496 FOXD4L1Q9NU39 408 aa27.53■■■□□ 2
RFNG-201ENST00000310496 SOCS7O14512 581 aa27.53■■■□□ 2
RFNG-201ENST00000310496 OSBPL5Q9H0X9 879 aaPredicted RBP27.53■■■□□ 2
RFNG-201ENST00000310496 ECM29Q5VYK3 1845 aa27.52■■■□□ 2
RFNG-201ENST00000310496 NPM3O75607 178 aaKnown RBP27.52■■■□□ 2
RFNG-201ENST00000310496 PRDM1O75626 825 aa27.52■■■□□ 2
RFNG-201ENST00000310496 DDIT3P35638 169 aa27.52■■■□□ 2
RFNG-201ENST00000310496 CACNB3P54284 484 aa27.52■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms