RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 DYNLL1P63167 89 aaKnown RBP14.49□□□□□ -0.09
RETREG3-201ENST00000309428 EPB41L2O43491 1005 aaKnown RBP14.49□□□□□ -0.09
RETREG3-201ENST00000309428 RASGRF1Q13972 1273 aa14.49□□□□□ -0.09
RETREG3-201ENST00000309428 RABL6Q3YEC7 729 aaPredicted RBP14.49□□□□□ -0.09
RETREG3-201ENST00000309428 JMYQ8N9B5 988 aa14.49□□□□□ -0.09
RETREG3-201ENST00000309428 CCDC150Q8NCX0 1101 aa14.49□□□□□ -0.09
RETREG3-201ENST00000309428 TSPYL1Q9H0U9 437 aa14.49□□□□□ -0.09
RETREG3-201ENST00000309428 KIF13AQ9H1H9 1805 aa14.49□□□□□ -0.09
RETREG3-201ENST00000309428 CARMIL3Q8ND23 1372 aa14.49□□□□□ -0.09
RETREG3-201ENST00000309428 FER1L4A9Z1Z3 1794 aa14.49□□□□□ -0.09
RETREG3-201ENST00000309428 ERVV-2B6SEH9 535 aa14.49□□□□□ -0.09
RETREG3-201ENST00000309428 F8W031 263 aaPredicted RBP14.49□□□□□ -0.09
RETREG3-201ENST00000309428 FAM160A1Q05DH4 1040 aa14.49□□□□□ -0.09
RETREG3-201ENST00000309428 DNAJC21Q5F1R6 531 aaKnown RBP14.49□□□□□ -0.09
RETREG3-201ENST00000309428 GIGYF2Q6Y7W6 1299 aaKnown RBP14.49□□□□□ -0.09
RETREG3-201ENST00000309428 TRIM22Q8IYM9 498 aa14.49□□□□□ -0.09
RETREG3-201ENST00000309428 LCORLQ8N3X6 602 aa14.49□□□□□ -0.09
RETREG3-201ENST00000309428 CABP5Q9NP86 173 aa14.49□□□□□ -0.09
RETREG3-201ENST00000309428 VPS54Q9P1Q0 977 aa14.49□□□□□ -0.09
RETREG3-201ENST00000309428 DDX41Q9UJV9 622 aaKnown RBP14.49□□□□□ -0.09
RETREG3-201ENST00000309428 ATP1A3P13637 1013 aa14.48□□□□□ -0.09
RETREG3-201ENST00000309428 CDC27P30260 824 aa14.48□□□□□ -0.09
RETREG3-201ENST00000309428 CDC25AP30304 524 aa14.48□□□□□ -0.09
RETREG3-201ENST00000309428 SART3Q15020 963 aaKnown RBP14.48□□□□□ -0.09
RETREG3-201ENST00000309428 SLC51AQ86UW1 340 aa14.48□□□□□ -0.09
RETREG3-201ENST00000309428 SPATA5Q8NB90 893 aa14.48□□□□□ -0.09
RETREG3-201ENST00000309428 NACAP1Q9BZK3 213 aa14.48□□□□□ -0.09
RETREG3-201ENST00000309428 FOXN1O15353 648 aa14.48□□□□□ -0.09
RETREG3-201ENST00000309428 HNRNPH2P55795 449 aaKnown RBP14.48□□□□□ -0.09
RETREG3-201ENST00000309428 ANGEL1Q9UNK9 670 aaKnown RBP14.48□□□□□ -0.09
RETREG3-201ENST00000309428 NWD1Q149M9 1564 aa14.48□□□□□ -0.09
RETREG3-201ENST00000309428 ZNF202O95125 648 aa14.48□□□□□ -0.09
RETREG3-201ENST00000309428 PDE8BO95263 885 aa14.48□□□□□ -0.09
RETREG3-201ENST00000309428 FDPSP14324 419 aaKnown RBP14.48□□□□□ -0.09
RETREG3-201ENST00000309428 GUCY1A2P33402 732 aa14.48□□□□□ -0.09
RETREG3-201ENST00000309428 WTAPQ15007 396 aa14.48□□□□□ -0.09
RETREG3-201ENST00000309428 AATFQ9NY61 560 aaKnown RBP eCLIP14.48□□□□□ -0.09
RETREG3-201ENST00000309428 ARHGAP23Q9P227 1491 aa14.48□□□□□ -0.09
RETREG3-201ENST00000309428 ERLIN1O75477 346 aa14.47□□□□□ -0.09
RETREG3-201ENST00000309428 MATR3P43243 847 aaKnown RBP eCLIP14.47□□□□□ -0.09
RETREG3-201ENST00000309428 ADKP55263 362 aaKnown RBP14.47□□□□□ -0.09
RETREG3-201ENST00000309428 FANCCQ00597 558 aa14.47□□□□□ -0.09
RETREG3-201ENST00000309428 SSRP1Q08945 709 aaKnown RBP14.47□□□□□ -0.09
RETREG3-201ENST00000309428 MYSM1Q5VVJ2 828 aa14.47□□□□□ -0.09
RETREG3-201ENST00000309428 DHX58Q96C10 678 aa14.47□□□□□ -0.09
RETREG3-201ENST00000309428 RUFY1Q96T51 708 aa14.47□□□□□ -0.09
RETREG3-201ENST00000309428 DSCC1Q9BVC3 393 aa14.47□□□□□ -0.09
RETREG3-201ENST00000309428 ANKIB1Q9P2G1 1089 aa14.47□□□□□ -0.09
RETREG3-201ENST00000309428 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.47□□□□□ -0.09
RETREG3-201ENST00000309428 NEDD4P46934 1319 aa14.47□□□□□ -0.09
RETREG3-201ENST00000309428 MAP3K15Q6ZN16 1313 aa14.47□□□□□ -0.09
RETREG3-201ENST00000309428 USP42Q9H9J4 1324 aaKnown RBP14.47□□□□□ -0.09
RETREG3-201ENST00000309428 KIF5CO60282 957 aa14.47□□□□□ -0.09
RETREG3-201ENST00000309428 CASP7P55210 303 aa14.47□□□□□ -0.09
RETREG3-201ENST00000309428 ZSWIM5Q9P217 1185 aa14.47□□□□□ -0.09
RETREG3-201ENST00000309428 SH3TC1Q8TE82 1336 aa14.47□□□□□ -0.09
RETREG3-201ENST00000309428 EIF3JO75822 258 aaKnown RBP14.47□□□□□ -0.09
RETREG3-201ENST00000309428 FILIP1LQ4L180 1135 aa14.47□□□□□ -0.09
RETREG3-201ENST00000309428 CARD10Q9BWT7 1032 aa14.47□□□□□ -0.09
RETREG3-201ENST00000309428 SRP68Q9UHB9 627 aaKnown RBP14.47□□□□□ -0.09
RETREG3-201ENST00000309428 CAVIN2O95810 425 aa14.46□□□□□ -0.09
RETREG3-201ENST00000309428 CLCN6P51797 869 aa14.46□□□□□ -0.09
RETREG3-201ENST00000309428 EVX2Q03828 476 aa14.46□□□□□ -0.09
RETREG3-201ENST00000309428 ANO1Q5XXA6 986 aa14.46□□□□□ -0.09
RETREG3-201ENST00000309428 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.46□□□□□ -0.09
RETREG3-201ENST00000309428 ANKRD20A12PQ8NF67 263 aa14.46□□□□□ -0.09
RETREG3-201ENST00000309428 SLC4A9Q96Q91 983 aa14.46□□□□□ -0.09
RETREG3-201ENST00000309428 PLEKHA4Q9H4M7 779 aa14.46□□□□□ -0.09
RETREG3-201ENST00000309428 NMT2O60551 498 aa14.46□□□□□ -0.09
RETREG3-201ENST00000309428 PFKFB1P16118 471 aa14.46□□□□□ -0.09
RETREG3-201ENST00000309428 CRKLP46109 303 aaKnown RBP14.46□□□□□ -0.09
RETREG3-201ENST00000309428 PPP2R3AQ06190 1150 aa14.46□□□□□ -0.09
RETREG3-201ENST00000309428 ACBD3Q9H3P7 528 aa14.46□□□□□ -0.09
RETREG3-201ENST00000309428 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.46□□□□□ -0.09
RETREG3-201ENST00000309428 FAM205CA6NFA0 338 aa14.46□□□□□ -0.1
RETREG3-201ENST00000309428 PDE8AO60658 829 aa14.46□□□□□ -0.1
RETREG3-201ENST00000309428 PCCAP05165 728 aaPredicted RBP14.46□□□□□ -0.1
RETREG3-201ENST00000309428 ANTXR2P58335 489 aa14.46□□□□□ -0.1
RETREG3-201ENST00000309428 ZNF174Q15697 407 aa14.46□□□□□ -0.1
RETREG3-201ENST00000309428 LRP10Q7Z4F1 713 aa14.46□□□□□ -0.1
RETREG3-201ENST00000309428 SMYD4Q8IYR2 804 aaPredicted RBP14.46□□□□□ -0.1
RETREG3-201ENST00000309428 TDRD7Q8NHU6 1098 aaKnown RBP14.46□□□□□ -0.1
RETREG3-201ENST00000309428 STX8Q9UNK0 236 aa14.46□□□□□ -0.1
RETREG3-201ENST00000309428 RTN1Q16799 776 aa14.45□□□□□ -0.1
RETREG3-201ENST00000309428 DIS3L2Q8IYB7 885 aaKnown RBP14.45□□□□□ -0.1
RETREG3-201ENST00000309428 IFNL3Q8IZI9 196 aa14.45□□□□□ -0.1
RETREG3-201ENST00000309428 FAM107BQ9H098 131 aa14.45□□□□□ -0.1
RETREG3-201ENST00000309428 CPVLQ9H3G5 476 aa14.45□□□□□ -0.1
RETREG3-201ENST00000309428 V9GY48 417 aaPredicted RBP14.45□□□□□ -0.1
RETREG3-201ENST00000309428 SAP30BPQ9UHR5 308 aaKnown RBP14.45□□□□□ -0.1
RETREG3-201ENST00000309428 POLR2DO15514 142 aaKnown RBP14.45□□□□□ -0.1
RETREG3-201ENST00000309428 PTF1AQ7RTS3 328 aa14.45□□□□□ -0.1
RETREG3-201ENST00000309428 TXLNBQ8N3L3 684 aa14.45□□□□□ -0.1
RETREG3-201ENST00000309428 FBXO18Q8NFZ0 1043 aa14.45□□□□□ -0.1
RETREG3-201ENST00000309428 LTN1O94822 1766 aa14.44□□□□□ -0.1
RETREG3-201ENST00000309428 SMC1AQ14683 1233 aaKnown RBP14.44□□□□□ -0.1
RETREG3-201ENST00000309428 PUM3Q15397 648 aaKnown RBP14.44□□□□□ -0.1
RETREG3-201ENST00000309428 ZSCAN26Q16670 478 aa14.44□□□□□ -0.1
RETREG3-201ENST00000309428 CAPZA3Q96KX2 299 aa14.44□□□□□ -0.1
RETREG3-201ENST00000309428 DEF6Q9H4E7 631 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms