RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 PHLDB2Q86SQ0 1253 aa14.14□□□□□ -0.15
USP38-201ENST00000307017 NAPGQ99747 312 aaPredicted RBP14.14□□□□□ -0.15
USP38-201ENST00000307017 HMG20BQ9P0W2 317 aa14.14□□□□□ -0.15
USP38-201ENST00000307017 ATAD2BQ9ULI0 1458 aa14.14□□□□□ -0.15
USP38-201ENST00000307017 DAPK3O43293 454 aa14.13□□□□□ -0.15
USP38-201ENST00000307017 MBD4O95243 580 aa14.13□□□□□ -0.15
USP38-201ENST00000307017 SNX16P57768 344 aa14.13□□□□□ -0.15
USP38-201ENST00000307017 ASIC2Q16515 512 aa14.13□□□□□ -0.15
USP38-201ENST00000307017 CCDC152Q4G0S7 254 aa14.13□□□□□ -0.15
USP38-201ENST00000307017 IMPG2Q9BZV3 1241 aa14.13□□□□□ -0.15
USP38-201ENST00000307017 GRM8O00222 908 aa14.13□□□□□ -0.15
USP38-201ENST00000307017 KRT19P08727 400 aa14.13□□□□□ -0.15
USP38-201ENST00000307017 ABCB4P21439 1286 aa14.13□□□□□ -0.15
USP38-201ENST00000307017 TFCP2L1Q9NZI6 479 aa14.13□□□□□ -0.15
USP38-201ENST00000307017 FANCCQ00597 558 aa14.13□□□□□ -0.15
USP38-201ENST00000307017 NAA35Q5VZE5 725 aa14.13□□□□□ -0.15
USP38-201ENST00000307017 NLRC4Q9NPP4 1024 aa14.13□□□□□ -0.15
USP38-201ENST00000307017 TNFAIP3P21580 790 aa14.13□□□□□ -0.15
USP38-201ENST00000307017 KRT79Q5XKE5 535 aa14.13□□□□□ -0.15
USP38-201ENST00000307017 EP400NLQ6ZTU2 488 aa14.13□□□□□ -0.15
USP38-201ENST00000307017 NKIRAS1Q9NYS0 192 aa14.13□□□□□ -0.15
USP38-201ENST00000307017 SEPT10Q9P0V9 454 aa14.13□□□□□ -0.15
USP38-201ENST00000307017 GJA3Q9Y6H8 435 aa14.13□□□□□ -0.15
USP38-201ENST00000307017 WDR66Q8TBY9 1149 aa14.13□□□□□ -0.15
USP38-201ENST00000307017 LIG3P49916 1009 aa14.13□□□□□ -0.15
USP38-201ENST00000307017 TBC1D8BQ0IIM8 1120 aa14.13□□□□□ -0.15
USP38-201ENST00000307017 DZIP3Q86Y13 1208 aaKnown RBP14.13□□□□□ -0.15
USP38-201ENST00000307017 PLEKHM2Q8IWE5 1019 aa14.13□□□□□ -0.15
USP38-201ENST00000307017 EDC3Q96F86 508 aaKnown RBP14.13□□□□□ -0.15
USP38-201ENST00000307017 ASIC3Q9UHC3 531 aa14.13□□□□□ -0.15
USP38-201ENST00000307017 SYNRGQ9UMZ2 1314 aa14.13□□□□□ -0.15
USP38-201ENST00000307017 GNL1P36915 607 aaPredicted RBP14.12□□□□□ -0.15
USP38-201ENST00000307017 ST5P78524 1137 aa14.12□□□□□ -0.15
USP38-201ENST00000307017 TAF12Q16514 161 aa14.12□□□□□ -0.15
USP38-201ENST00000307017 MCUR1Q96AQ8 359 aa14.12□□□□□ -0.15
USP38-201ENST00000307017 CAPN7Q9Y6W3 813 aa14.12□□□□□ -0.15
USP38-201ENST00000307017 CALCOCO2Q13137 446 aa14.12□□□□□ -0.15
USP38-201ENST00000307017 KAZNQ674X7 775 aa14.12□□□□□ -0.15
USP38-201ENST00000307017 CEP85Q6P2H3 762 aa14.12□□□□□ -0.15
USP38-201ENST00000307017 SND1Q7KZF4 910 aaKnown RBP eCLIP14.12□□□□□ -0.15
USP38-201ENST00000307017 RMDN2Q96LZ7 410 aa14.12□□□□□ -0.15
USP38-201ENST00000307017 ACEP12821 1306 aa14.12□□□□□ -0.15
USP38-201ENST00000307017 ATP2A1O14983 1001 aa14.12□□□□□ -0.15
USP38-201ENST00000307017 CCDC172P0C7W6 258 aa14.12□□□□□ -0.15
USP38-201ENST00000307017 PDIA4P13667 645 aaKnown RBP14.12□□□□□ -0.15
USP38-201ENST00000307017 KCTD16Q68DU8 428 aa14.12□□□□□ -0.15
USP38-201ENST00000307017 MRPL46Q9H2W6 279 aaKnown RBP14.12□□□□□ -0.15
USP38-201ENST00000307017 NSFL1CQ9UNZ2 370 aaKnown RBP14.12□□□□□ -0.15
USP38-201ENST00000307017 FAM135AQ9P2D6 1515 aa14.12□□□□□ -0.15
USP38-201ENST00000307017 SYNJ1O43426 1573 aa14.12□□□□□ -0.15
USP38-201ENST00000307017 SYNJ2BP-COX16A0A087WUM0 186 aa14.12□□□□□ -0.15
USP38-201ENST00000307017 GBP1P32455 592 aa14.12□□□□□ -0.15
USP38-201ENST00000307017 INF2Q27J81 1249 aa14.12□□□□□ -0.15
USP38-201ENST00000307017 SPATA17Q96L03 361 aa14.12□□□□□ -0.15
USP38-201ENST00000307017 FAM207AQ9NSI2 230 aaPredicted RBP14.12□□□□□ -0.15
USP38-201ENST00000307017 COX16Q9P0S2 106 aa14.12□□□□□ -0.15
USP38-201ENST00000307017 PTPN22Q9Y2R2 807 aa14.12□□□□□ -0.15
USP38-201ENST00000307017 MRPS25P82663 173 aaKnown RBP14.12□□□□□ -0.15
USP38-201ENST00000307017 CXorf38Q8TB03 319 aa14.12□□□□□ -0.15
USP38-201ENST00000307017 AATFQ9NY61 560 aaKnown RBP eCLIP14.12□□□□□ -0.15
USP38-201ENST00000307017 MTRF1LQ9UGC7 380 aaKnown RBP14.12□□□□□ -0.15
USP38-201ENST00000307017 KCNH5Q8NCM2 988 aa14.11□□□□□ -0.15
USP38-201ENST00000307017 SETDB2Q96T68 719 aa14.11□□□□□ -0.15
USP38-201ENST00000307017 MX2P20592 715 aa14.11□□□□□ -0.15
USP38-201ENST00000307017 PKP1Q13835 747 aa14.11□□□□□ -0.15
USP38-201ENST00000307017 SLF2Q8IX21 1173 aa14.11□□□□□ -0.15
USP38-201ENST00000307017 USP26Q9BXU7 913 aa14.11□□□□□ -0.15
USP38-201ENST00000307017 DPH5Q9H2P9 285 aa14.11□□□□□ -0.15
USP38-201ENST00000307017 C6orf50Q9HD87 102 aa14.11□□□□□ -0.15
USP38-201ENST00000307017 OPHN1O60890 802 aa14.11□□□□□ -0.15
USP38-201ENST00000307017 ITIH3Q06033 890 aa14.11□□□□□ -0.15
USP38-201ENST00000307017 FAM47AQ5JRC9 791 aa14.11□□□□□ -0.15
USP38-201ENST00000307017 PLVAPQ9BX97 442 aa14.11□□□□□ -0.15
USP38-201ENST00000307017 AFG3L2Q9Y4W6 797 aa14.11□□□□□ -0.15
USP38-201ENST00000307017 ABCC5O15440 1437 aa14.11□□□□□ -0.15
USP38-201ENST00000307017 STMN4Q9H169 189 aaPredicted RBP14.11□□□□□ -0.15
USP38-201ENST00000307017 RIPOR2Q9Y4F9 1068 aa14.11□□□□□ -0.15
USP38-201ENST00000307017 CC2D2AQ9P2K1 1620 aa14.11□□□□□ -0.15
USP38-201ENST00000307017 VSIG1Q86XK7 387 aa14.1□□□□□ -0.15
USP38-201ENST00000307017 PHF8Q9UPP1 1060 aa14.1□□□□□ -0.15
USP38-201ENST00000307017 GOLGA6BA6NDN3 693 aa14.1□□□□□ -0.15
USP38-201ENST00000307017 KIF3CO14782 793 aa14.1□□□□□ -0.15
USP38-201ENST00000307017 CASP2P42575 452 aa14.1□□□□□ -0.15
USP38-201ENST00000307017 MTHFSDQ2M296 383 aaKnown RBP14.1□□□□□ -0.15
USP38-201ENST00000307017 VPS37BQ9H9H4 285 aa14.1□□□□□ -0.15
USP38-201ENST00000307017 INTUQ9ULD6 942 aa14.1□□□□□ -0.15
USP38-201ENST00000307017 V9GY48 417 aaPredicted RBP14.1□□□□□ -0.15
USP38-201ENST00000307017 NOS1P29475 1434 aa14.1□□□□□ -0.15
USP38-201ENST00000307017 ANKRD65E5RJM6 399 aa14.1□□□□□ -0.15
USP38-201ENST00000307017 TNNC1P63316 161 aa14.1□□□□□ -0.15
USP38-201ENST00000307017 ZNF827Q17R98 1081 aa14.1□□□□□ -0.15
USP38-201ENST00000307017 WASLO00401 505 aaPredicted RBP14.1□□□□□ -0.15
USP38-201ENST00000307017 SLC27A2O14975 620 aa14.1□□□□□ -0.15
USP38-201ENST00000307017 RNF113AO15541 343 aaKnown RBP14.1□□□□□ -0.15
USP38-201ENST00000307017 CHMLP26374 656 aa14.1□□□□□ -0.15
USP38-201ENST00000307017 POLD1P28340 1107 aa14.1□□□□□ -0.15
USP38-201ENST00000307017 FAM89AQ96GI7 184 aa14.1□□□□□ -0.15
USP38-201ENST00000307017 CAMSAP2Q08AD1 1489 aa14.1□□□□□ -0.15
USP38-201ENST00000307017 TEX11Q8IYF3 940 aa14.1□□□□□ -0.15
USP38-201ENST00000307017 LMBR1Q8WVP7 490 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms