RNA–Protein interactions for RNA: ENST00000304990.8

COL4A3-201, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-201ENST00000304990 ANKLE1Q8NAG6 615 aa12.68□□□□□ -0.38
COL4A3-201ENST00000304990 COL25A1Q9BXS0 654 aaPredicted RBP12.68□□□□□ -0.38
COL4A3-201ENST00000304990 NBPF3Q9H094 633 aa12.68□□□□□ -0.38
COL4A3-201ENST00000304990 MTMR10Q9NXD2 777 aa12.68□□□□□ -0.38
COL4A3-201ENST00000304990 IFIT1P09914 478 aaKnown RBP12.67□□□□□ -0.38
COL4A3-201ENST00000304990 MAGEA10P43363 369 aaPredicted RBP12.67□□□□□ -0.38
COL4A3-201ENST00000304990 LRIT3Q3SXY7 679 aa12.67□□□□□ -0.38
COL4A3-201ENST00000304990 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.67□□□□□ -0.38
COL4A3-201ENST00000304990 SCYL3Q8IZE3 742 aa12.67□□□□□ -0.38
COL4A3-201ENST00000304990 ANKRD13CQ8N6S4 541 aa12.67□□□□□ -0.38
COL4A3-201ENST00000304990 LRRFIP2Q9Y608 721 aaKnown RBP12.67□□□□□ -0.38
COL4A3-201ENST00000304990 DOCK1Q14185 1865 aa12.66□□□□□ -0.38
COL4A3-201ENST00000304990 A0A0G2JLL6 359 aaPredicted RBP12.66□□□□□ -0.38
COL4A3-201ENST00000304990 PDE8BO95263 885 aa12.66□□□□□ -0.38
COL4A3-201ENST00000304990 CDC42EP5Q6NZY7 148 aa12.66□□□□□ -0.38
COL4A3-201ENST00000304990 PRRT2Q7Z6L0 340 aaPredicted RBP12.66□□□□□ -0.38
COL4A3-201ENST00000304990 WWC1Q8IX03 1113 aa12.66□□□□□ -0.38
COL4A3-201ENST00000304990 WDR66Q8TBY9 1149 aa12.66□□□□□ -0.38
COL4A3-201ENST00000304990 SUCLG2Q96I99 432 aa12.66□□□□□ -0.38
COL4A3-201ENST00000304990 SRCIN1Q9C0H9 1055 aa12.66□□□□□ -0.38
COL4A3-201ENST00000304990 C11orf49Q9H6J7 331 aa12.66□□□□□ -0.38
COL4A3-201ENST00000304990 HMX1Q9NP08 348 aaPredicted RBP12.66□□□□□ -0.38
COL4A3-201ENST00000304990 USP40Q9NVE5 1235 aa12.66□□□□□ -0.38
COL4A3-201ENST00000304990 PNMA3Q9UL41 463 aa12.66□□□□□ -0.38
COL4A3-201ENST00000304990 SLC45A1Q9Y2W3 748 aa12.66□□□□□ -0.38
COL4A3-201ENST00000304990 PTPRFP10586 1907 aa12.66□□□□□ -0.38
COL4A3-201ENST00000304990 TRIM75PA6NK02 468 aa12.65□□□□□ -0.38
COL4A3-201ENST00000304990 ALDH1L1O75891 902 aa12.65□□□□□ -0.38
COL4A3-201ENST00000304990 HMGCRP04035 888 aa12.65□□□□□ -0.38
COL4A3-201ENST00000304990 NFIAQ12857 509 aa12.65□□□□□ -0.38
COL4A3-201ENST00000304990 LRRC24Q50LG9 513 aa12.65□□□□□ -0.38
COL4A3-201ENST00000304990 DAGLAQ9Y4D2 1042 aa12.65□□□□□ -0.38
COL4A3-201ENST00000304990 IL16Q14005 1332 aa12.64□□□□□ -0.39
COL4A3-201ENST00000304990 FANCIQ9NVI1 1328 aa12.64□□□□□ -0.39
COL4A3-201ENST00000304990 VAMP4O75379 141 aa12.64□□□□□ -0.39
COL4A3-201ENST00000304990 SLC5A1P13866 664 aa12.64□□□□□ -0.39
COL4A3-201ENST00000304990 PTPRAP18433 802 aa12.64□□□□□ -0.39
COL4A3-201ENST00000304990 EXOSC9Q06265 439 aaKnown RBP12.64□□□□□ -0.39
COL4A3-201ENST00000304990 PUM3Q15397 648 aaKnown RBP12.64□□□□□ -0.39
COL4A3-201ENST00000304990 DIXDC1Q155Q3 683 aa12.64□□□□□ -0.39
COL4A3-201ENST00000304990 CCDC27Q2M243 656 aa12.64□□□□□ -0.39
COL4A3-201ENST00000304990 PRKRIP1Q9H875 184 aaPredicted RBP12.64□□□□□ -0.39
COL4A3-201ENST00000304990 DOCK3Q8IZD9 2030 aa12.64□□□□□ -0.39
COL4A3-201ENST00000304990 RPTORQ8N122 1335 aa12.63□□□□□ -0.39
COL4A3-201ENST00000304990 LDHBP07195 334 aaKnown RBP12.63□□□□□ -0.39
COL4A3-201ENST00000304990 FAM198AQ9UFP1 575 aa12.63□□□□□ -0.39
COL4A3-201ENST00000304990 AGTPBP1Q9UPW5 1226 aa12.63□□□□□ -0.39
COL4A3-201ENST00000304990 AFG3L2Q9Y4W6 797 aa12.63□□□□□ -0.39
COL4A3-201ENST00000304990 PHIPQ8WWQ0 1821 aa12.62□□□□□ -0.39
COL4A3-201ENST00000304990 MYH2Q9UKX2 1941 aa12.62□□□□□ -0.39
COL4A3-201ENST00000304990 RGS3P49796 1198 aa12.62□□□□□ -0.39
COL4A3-201ENST00000304990 FAM110CQ1W6H9 321 aa12.62□□□□□ -0.39
COL4A3-201ENST00000304990 FAM161BQ96MY7 647 aa12.62□□□□□ -0.39
COL4A3-201ENST00000304990 BICC1Q9H694 974 aaKnown RBP12.62□□□□□ -0.39
COL4A3-201ENST00000304990 GNL3LQ9NVN8 582 aaKnown RBP12.62□□□□□ -0.39
COL4A3-201ENST00000304990 SALL2Q9Y467 1007 aaPredicted RBP12.62□□□□□ -0.39
COL4A3-201ENST00000304990 RANBP2P49792 3224 aaKnown RBP12.62□□□□□ -0.39
COL4A3-201ENST00000304990 COL6A3P12111 3177 aa12.61□□□□□ -0.39
COL4A3-201ENST00000304990 PHF20L1A8MW92 1017 aa12.61□□□□□ -0.39
COL4A3-201ENST00000304990 NBPF7P0C2Y1 421 aaPredicted RBP12.61□□□□□ -0.39
COL4A3-201ENST00000304990 PRDX5P30044 214 aa12.61□□□□□ -0.39
COL4A3-201ENST00000304990 GCLCP48506 637 aaPredicted RBP12.61□□□□□ -0.39
COL4A3-201ENST00000304990 MDM2Q00987 491 aaPredicted RBP12.61□□□□□ -0.39
COL4A3-201ENST00000304990 PABPC4Q13310 644 aaKnown RBP eCLIP12.61□□□□□ -0.39
COL4A3-201ENST00000304990 ZFPM1Q8IX07 1006 aa12.61□□□□□ -0.39
COL4A3-201ENST00000304990 KLHDC4Q8TBB5 520 aa12.61□□□□□ -0.39
COL4A3-201ENST00000304990 KIF16BQ96L93 1317 aa12.61□□□□□ -0.39
COL4A3-201ENST00000304990 ATAD5Q96QE3 1844 aa12.6□□□□□ -0.39
COL4A3-201ENST00000304990 CTNND1O60716 968 aaKnown RBP12.6□□□□□ -0.39
COL4A3-201ENST00000304990 ENTPD3O75355 529 aa12.6□□□□□ -0.39
COL4A3-201ENST00000304990 CYP2B6P20813 491 aa12.6□□□□□ -0.39
COL4A3-201ENST00000304990 TRIM32Q13049 653 aa12.6□□□□□ -0.39
COL4A3-201ENST00000304990 PICALMQ13492 652 aa12.6□□□□□ -0.39
COL4A3-201ENST00000304990 TREML2Q5T2D2 321 aa12.6□□□□□ -0.39
COL4A3-201ENST00000304990 CCDC84Q86UT8 332 aaPredicted RBP12.6□□□□□ -0.39
COL4A3-201ENST00000304990 VGLL2Q8N8G2 317 aa12.6□□□□□ -0.39
COL4A3-201ENST00000304990 LPIN2Q92539 896 aa12.6□□□□□ -0.39
COL4A3-201ENST00000304990 KAZALD1Q96I82 304 aa12.6□□□□□ -0.39
COL4A3-201ENST00000304990 LBHD1Q9BQE6 289 aaPredicted RBP12.6□□□□□ -0.39
COL4A3-201ENST00000304990 ZNF697Q5TEC3 545 aa12.59□□□□□ -0.39
COL4A3-201ENST00000304990 DZIP1Q86YF9 867 aaKnown RBP12.59□□□□□ -0.39
COL4A3-201ENST00000304990 CCAR1Q8IX12 1150 aaKnown RBP12.59□□□□□ -0.39
COL4A3-201ENST00000304990 PROCA1Q8NCQ7 364 aaPredicted RBP12.59□□□□□ -0.39
COL4A3-201ENST00000304990 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.59□□□□□ -0.39
COL4A3-201ENST00000304990 OGDHLQ9ULD0 1010 aa12.59□□□□□ -0.39
COL4A3-201ENST00000304990 LOC285556D6RIA3 1793 aa12.58□□□□□ -0.39
COL4A3-201ENST00000304990 PRKAR2AP13861 404 aaKnown RBP12.58□□□□□ -0.4
COL4A3-201ENST00000304990 FGFR2P21802 821 aa12.58□□□□□ -0.4
COL4A3-201ENST00000304990 RABL6Q3YEC7 729 aaPredicted RBP12.58□□□□□ -0.4
COL4A3-201ENST00000304990 SAMD1Q6SPF0 538 aaPredicted RBP12.58□□□□□ -0.4
COL4A3-201ENST00000304990 SLF2Q8IX21 1173 aa12.58□□□□□ -0.4
COL4A3-201ENST00000304990 ZGPATQ8N5A5 531 aaKnown RBP12.58□□□□□ -0.4
COL4A3-201ENST00000304990 TRIB2Q92519 343 aa12.58□□□□□ -0.4
COL4A3-201ENST00000304990 IDI2Q9BXS1 227 aa12.58□□□□□ -0.4
COL4A3-201ENST00000304990 CWC22Q9HCG8 908 aaKnown RBP12.58□□□□□ -0.4
COL4A3-201ENST00000304990 PLXNB2O15031 1838 aa12.58□□□□□ -0.4
COL4A3-201ENST00000304990 ATRNL1Q5VV63 1379 aa12.57□□□□□ -0.4
COL4A3-201ENST00000304990 DDTLA6NHG4 134 aaPredicted RBP12.57□□□□□ -0.4
COL4A3-201ENST00000304990 HMGCS2P54868 508 aa12.57□□□□□ -0.4
COL4A3-201ENST00000304990 SPP2Q13103 211 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms