RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 USP17L21D6R901 530 aa16.99■□□□□ 0.31
SHCBP1-201ENST00000303383 IGSF3O75054 1194 aa16.99■□□□□ 0.31
SHCBP1-201ENST00000303383 SLF2Q8IX21 1173 aa16.99■□□□□ 0.31
SHCBP1-201ENST00000303383 ZNF219Q9P2Y4 722 aaPredicted RBP16.99■□□□□ 0.31
SHCBP1-201ENST00000303383 ZBTB43O43298 467 aa16.99■□□□□ 0.31
SHCBP1-201ENST00000303383 RANBP6O60518 1105 aaKnown RBP16.99■□□□□ 0.31
SHCBP1-201ENST00000303383 KRT85P78386 507 aa16.99■□□□□ 0.31
SHCBP1-201ENST00000303383 DNM1Q05193 864 aaKnown RBP16.99■□□□□ 0.31
SHCBP1-201ENST00000303383 WTAPQ15007 396 aa16.99■□□□□ 0.31
SHCBP1-201ENST00000303383 USP48Q86UV5 1035 aa16.99■□□□□ 0.31
SHCBP1-201ENST00000303383 SMARCC2Q8TAQ2 1214 aa16.99■□□□□ 0.31
SHCBP1-201ENST00000303383 ZKSCAN3Q9BRR0 538 aa16.99■□□□□ 0.31
SHCBP1-201ENST00000303383 EVCP57679 992 aa16.98■□□□□ 0.31
SHCBP1-201ENST00000303383 DIXDC1Q155Q3 683 aa16.98■□□□□ 0.31
SHCBP1-201ENST00000303383 TNS1Q9HBL0 1735 aaKnown RBP16.98■□□□□ 0.31
SHCBP1-201ENST00000303383 CDKL5O76039 1030 aa16.98■□□□□ 0.31
SHCBP1-201ENST00000303383 IL1R1P14778 569 aa16.98■□□□□ 0.31
SHCBP1-201ENST00000303383 EYA3Q99504 573 aa16.98■□□□□ 0.31
SHCBP1-201ENST00000303383 MCM9Q9NXL9 1143 aa16.98■□□□□ 0.31
SHCBP1-201ENST00000303383 CACNA1SQ13698 1873 aa16.98■□□□□ 0.31
SHCBP1-201ENST00000303383 CCDC88AQ3V6T2 1871 aa16.98■□□□□ 0.31
SHCBP1-201ENST00000303383 GOLGA8AA7E2F4 631 aa16.98■□□□□ 0.31
SHCBP1-201ENST00000303383 GTF2IP78347 998 aa16.98■□□□□ 0.31
SHCBP1-201ENST00000303383 CCDC144CPQ8IYA2 1237 aa16.98■□□□□ 0.31
SHCBP1-201ENST00000303383 CYP2D7A0A087X1C5 515 aa16.97■□□□□ 0.31
SHCBP1-201ENST00000303383 RXRAP19793 462 aa16.97■□□□□ 0.31
SHCBP1-201ENST00000303383 L1TD1Q5T7N2 865 aaKnown RBP16.97■□□□□ 0.31
SHCBP1-201ENST00000303383 COA1Q9GZY4 146 aa16.97■□□□□ 0.31
SHCBP1-201ENST00000303383 ORC3Q9UBD5 711 aaPredicted RBP16.97■□□□□ 0.31
SHCBP1-201ENST00000303383 TMTC2Q8N394 836 aa16.97■□□□□ 0.31
SHCBP1-201ENST00000303383 DCP1AQ9NPI6 582 aaPredicted RBP16.97■□□□□ 0.31
SHCBP1-201ENST00000303383 ARPP21Q9UBL0 812 aaPredicted RBP16.97■□□□□ 0.31
SHCBP1-201ENST00000303383 APOA5Q6Q788 366 aa16.97■□□□□ 0.31
SHCBP1-201ENST00000303383 DEFB132Q7Z7B7 95 aa16.97■□□□□ 0.31
SHCBP1-201ENST00000303383 IQCA1Q86XH1 822 aa16.97■□□□□ 0.31
SHCBP1-201ENST00000303383 SYAP1Q96A49 352 aaPredicted RBP16.97■□□□□ 0.31
SHCBP1-201ENST00000303383 ZBTB22O15209 634 aa16.96■□□□□ 0.31
SHCBP1-201ENST00000303383 CTDNEP1O95476 244 aa16.96■□□□□ 0.31
SHCBP1-201ENST00000303383 PDE4CQ08493 712 aa16.96■□□□□ 0.31
SHCBP1-201ENST00000303383 SLC4A8Q2Y0W8 1093 aa16.96■□□□□ 0.31
SHCBP1-201ENST00000303383 CTR9Q6PD62 1173 aa16.96■□□□□ 0.31
SHCBP1-201ENST00000303383 OLFM4Q6UX06 510 aa16.96■□□□□ 0.31
SHCBP1-201ENST00000303383 ANAPC4Q9UJX5 808 aa16.96■□□□□ 0.31
SHCBP1-201ENST00000303383 PRDM1O75626 825 aa16.96■□□□□ 0.31
SHCBP1-201ENST00000303383 LIFRP42702 1097 aa16.96■□□□□ 0.31
SHCBP1-201ENST00000303383 PDE4BQ07343 736 aa16.96■□□□□ 0.31
SHCBP1-201ENST00000303383 IGDCC4Q8TDY8 1250 aa16.96■□□□□ 0.31
SHCBP1-201ENST00000303383 LY9Q9HBG7 655 aa16.96■□□□□ 0.31
SHCBP1-201ENST00000303383 GOLGA6L4A6NEF3 574 aa16.95■□□□□ 0.3
SHCBP1-201ENST00000303383 GUCY1B3Q02153 619 aa16.95■□□□□ 0.3
SHCBP1-201ENST00000303383 CERS3Q8IU89 383 aa16.95■□□□□ 0.3
SHCBP1-201ENST00000303383 ZSCAN16Q9H4T2 348 aaPredicted RBP16.95■□□□□ 0.3
SHCBP1-201ENST00000303383 PCP11498 1178 aaKnown RBP16.95■□□□□ 0.3
SHCBP1-201ENST00000303383 CNKSR1Q969H4 720 aa16.95■□□□□ 0.3
SHCBP1-201ENST00000303383 C8orf76Q96K31 380 aa16.95■□□□□ 0.3
SHCBP1-201ENST00000303383 CHD4Q14839 1912 aa16.95■□□□□ 0.3
SHCBP1-201ENST00000303383 DOK7Q18PE1 504 aa16.95■□□□□ 0.3
SHCBP1-201ENST00000303383 NUP133Q8WUM0 1156 aa16.95■□□□□ 0.3
SHCBP1-201ENST00000303383 MYL10Q9BUA6 226 aa16.95■□□□□ 0.3
SHCBP1-201ENST00000303383 HPS5Q9UPZ3 1129 aa16.95■□□□□ 0.3
SHCBP1-201ENST00000303383 PLCG2P16885 1265 aa16.94■□□□□ 0.3
SHCBP1-201ENST00000303383 GPT2Q8TD30 523 aa16.94■□□□□ 0.3
SHCBP1-201ENST00000303383 MROH7-TTC4A0A0A0MT08 1334 aa16.94■□□□□ 0.3
SHCBP1-201ENST00000303383 ANKRD31Q8N7Z5 1873 aa16.94■□□□□ 0.3
SHCBP1-201ENST00000303383 BTDP43251 543 aa16.94■□□□□ 0.3
SHCBP1-201ENST00000303383 STYK1Q6J9G0 422 aa16.94■□□□□ 0.3
SHCBP1-201ENST00000303383 FAM173BQ6P4H8 233 aa16.94■□□□□ 0.3
SHCBP1-201ENST00000303383 SGMS1Q86VZ5 419 aa16.94■□□□□ 0.3
SHCBP1-201ENST00000303383 SH3RF3Q8TEJ3 882 aaPredicted RBP16.94■□□□□ 0.3
SHCBP1-201ENST00000303383 TCHHQ07283 1943 aa16.94■□□□□ 0.3
SHCBP1-201ENST00000303383 F8W031 263 aaPredicted RBP16.94■□□□□ 0.3
SHCBP1-201ENST00000303383 POLR3DP05423 398 aaPredicted RBP16.94■□□□□ 0.3
SHCBP1-201ENST00000303383 CHRNA5P30532 468 aa16.94■□□□□ 0.3
SHCBP1-201ENST00000303383 ADD1P35611 737 aaKnown RBP16.94■□□□□ 0.3
SHCBP1-201ENST00000303383 GRIK5Q16478 980 aa16.94■□□□□ 0.3
SHCBP1-201ENST00000303383 TGFBRAP1Q8WUH2 860 aa16.94■□□□□ 0.3
SHCBP1-201ENST00000303383 BAZ2AQ9UIF9 1905 aaKnown RBP16.93■□□□□ 0.3
SHCBP1-201ENST00000303383 NKX2-3Q8TAU0 364 aa16.93■□□□□ 0.3
SHCBP1-201ENST00000303383 SENP2Q9HC62 589 aa16.93■□□□□ 0.3
SHCBP1-201ENST00000303383 RGPD3A6NKT7 1758 aaPredicted RBP16.93■□□□□ 0.3
SHCBP1-201ENST00000303383 RGPD4Q7Z3J3 1758 aa16.93■□□□□ 0.3
SHCBP1-201ENST00000303383 TEX11Q8IYF3 940 aa16.93■□□□□ 0.3
SHCBP1-201ENST00000303383 MTA3Q9BTC8 594 aa16.93■□□□□ 0.3
SHCBP1-201ENST00000303383 SCAND2PQ9GZW5 306 aaPredicted RBP16.93■□□□□ 0.3
SHCBP1-201ENST00000303383 TNKSO95271 1327 aa16.93■□□□□ 0.3
SHCBP1-201ENST00000303383 IARSP41252 1262 aaKnown RBP16.93■□□□□ 0.3
SHCBP1-201ENST00000303383 RBM27Q9P2N5 1060 aaKnown RBP16.93■□□□□ 0.3
SHCBP1-201ENST00000303383 TFIP11Q9UBB9 837 aaKnown RBP16.93■□□□□ 0.3
SHCBP1-201ENST00000303383 TACC3Q9Y6A5 838 aa16.93■□□□□ 0.3
SHCBP1-201ENST00000303383 CCDC196A0A1B0GTZ2 297 aa16.92■□□□□ 0.3
SHCBP1-201ENST00000303383 TSPY2A6NKD2 308 aa16.92■□□□□ 0.3
SHCBP1-201ENST00000303383 GADD45BO75293 160 aaPredicted RBP16.92■□□□□ 0.3
SHCBP1-201ENST00000303383 UBE2HP62256 183 aa16.92■□□□□ 0.3
SHCBP1-201ENST00000303383 GNL2Q13823 731 aaKnown RBP16.92■□□□□ 0.3
SHCBP1-201ENST00000303383 TRIM29Q14134 588 aa16.92■□□□□ 0.3
SHCBP1-201ENST00000303383 IFIT1BQ5T764 474 aaKnown RBP16.92■□□□□ 0.3
SHCBP1-201ENST00000303383 SPATA32Q96LK8 384 aa16.92■□□□□ 0.3
SHCBP1-201ENST00000303383 MKNK2Q9HBH9 465 aa16.92■□□□□ 0.3
SHCBP1-201ENST00000303383 USP17L8P0C7I0 530 aa16.92■□□□□ 0.3
SHCBP1-201ENST00000303383 RTN1Q16799 776 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 367 ms