RNA–Protein interactions for RNA: ENST00000299440.5

RAG1-201, Transcript of recombination activating 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAG1, Length 6,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAG1-201ENST00000299440 UBE4AQ14139 1066 aa8.05□□□□□ -1.12
RAG1-201ENST00000299440 TTC30AQ86WT1 665 aa8.05□□□□□ -1.12
RAG1-201ENST00000299440 ARHGAP45Q92619 1136 aa8.05□□□□□ -1.12
RAG1-201ENST00000299440 THRAP3Q9Y2W1 955 aaKnown RBP8.05□□□□□ -1.12
RAG1-201ENST00000299440 SYCE3A1L190 88 aa8.04□□□□□ -1.12
RAG1-201ENST00000299440 PLEKHG3A1L390 1219 aa8.04□□□□□ -1.12
RAG1-201ENST00000299440 IQCA1LA6NCM1 817 aa8.04□□□□□ -1.12
RAG1-201ENST00000299440 KIAA1841Q6NSI8 718 aa8.04□□□□□ -1.12
RAG1-201ENST00000299440 PIK3AP1Q6ZUJ8 805 aa8.04□□□□□ -1.12
RAG1-201ENST00000299440 PRAG1Q86YV5 1406 aa8.04□□□□□ -1.12
RAG1-201ENST00000299440 JCADQ9P266 1359 aa8.04□□□□□ -1.12
RAG1-201ENST00000299440 USP19O94966 1318 aa8.04□□□□□ -1.12
RAG1-201ENST00000299440 SFPQP23246 707 aaKnown RBP eCLIP8.04□□□□□ -1.12
RAG1-201ENST00000299440 RAD51AP2Q09MP3 1159 aa8.04□□□□□ -1.12
RAG1-201ENST00000299440 CFAP58Q5T655 872 aa8.04□□□□□ -1.12
RAG1-201ENST00000299440 KRT26Q7Z3Y9 468 aa8.04□□□□□ -1.12
RAG1-201ENST00000299440 RSPH3Q86UC2 560 aa8.04□□□□□ -1.12
RAG1-201ENST00000299440 ARAP3Q8WWN8 1544 aa8.04□□□□□ -1.12
RAG1-201ENST00000299440 hCG_1642624A0A1W2PR95 340 aa8.04□□□□□ -1.12
RAG1-201ENST00000299440 TMEM232C9JQI7 657 aa8.04□□□□□ -1.12
RAG1-201ENST00000299440 VAMP4O75379 141 aa8.04□□□□□ -1.12
RAG1-201ENST00000299440 SEPT14Q6ZU15 432 aa8.04□□□□□ -1.12
RAG1-201ENST00000299440 FRMD4BQ9Y2L6 1034 aa8.04□□□□□ -1.12
RAG1-201ENST00000299440 NDC80O14777 642 aa8.04□□□□□ -1.12
RAG1-201ENST00000299440 DAPK3O43293 454 aa8.04□□□□□ -1.12
RAG1-201ENST00000299440 AKR1B10O60218 316 aa8.04□□□□□ -1.12
RAG1-201ENST00000299440 BBOX1O75936 387 aa8.04□□□□□ -1.12
RAG1-201ENST00000299440 MED10Q9BTT4 135 aa8.04□□□□□ -1.12
RAG1-201ENST00000299440 MYL10Q9BUA6 226 aa8.04□□□□□ -1.12
RAG1-201ENST00000299440 GIGYF2Q6Y7W6 1299 aaKnown RBP8.04□□□□□ -1.12
RAG1-201ENST00000299440 METP08581 1390 aa8.04□□□□□ -1.12
RAG1-201ENST00000299440 PLEKHG1Q9ULL1 1385 aa8.04□□□□□ -1.12
RAG1-201ENST00000299440 VWA3AA6NCI4 1184 aa8.03□□□□□ -1.12
RAG1-201ENST00000299440 PSMA7O14818 248 aa8.03□□□□□ -1.12
RAG1-201ENST00000299440 EIF4A1P60842 406 aaKnown RBP8.03□□□□□ -1.12
RAG1-201ENST00000299440 IFFO1Q0D2I5 559 aa8.03□□□□□ -1.12
RAG1-201ENST00000299440 CC2D2BQ6DHV5 1058 aa8.03□□□□□ -1.12
RAG1-201ENST00000299440 ZBTB38Q8NAP3 1195 aaPredicted RBP8.03□□□□□ -1.12
RAG1-201ENST00000299440 TTC41PQ6P2S7 1318 aa8.03□□□□□ -1.12
RAG1-201ENST00000299440 USP17L3A6NCW0 530 aa8.03□□□□□ -1.12
RAG1-201ENST00000299440 USP17L4A6NCW7 530 aa8.03□□□□□ -1.12
RAG1-201ENST00000299440 USP17L12C9JPN9 530 aa8.03□□□□□ -1.12
RAG1-201ENST00000299440 USP17L21D6R901 530 aa8.03□□□□□ -1.12
RAG1-201ENST00000299440 STX10O60499 249 aa8.03□□□□□ -1.12
RAG1-201ENST00000299440 PRPF6O94906 941 aaKnown RBP8.03□□□□□ -1.12
RAG1-201ENST00000299440 HOXD10P28358 340 aa8.03□□□□□ -1.12
RAG1-201ENST00000299440 ARPP19P56211 112 aa8.03□□□□□ -1.12
RAG1-201ENST00000299440 RASA3Q14644 834 aa8.03□□□□□ -1.12
RAG1-201ENST00000299440 USP17L1Q7RTZ2 530 aa8.03□□□□□ -1.12
RAG1-201ENST00000299440 SH3BP5O60239 455 aa8.03□□□□□ -1.12
RAG1-201ENST00000299440 HAUS3Q68CZ6 603 aa8.03□□□□□ -1.12
RAG1-201ENST00000299440 DEPTORQ8TB45 409 aa8.03□□□□□ -1.12
RAG1-201ENST00000299440 RAET1EQ8TD07 263 aa8.03□□□□□ -1.12
RAG1-201ENST00000299440 SDR42E1Q8WUS8 393 aa8.03□□□□□ -1.12
RAG1-201ENST00000299440 APPBP2Q92624 585 aa8.03□□□□□ -1.12
RAG1-201ENST00000299440 COA7Q96BR5 231 aa8.03□□□□□ -1.12
RAG1-201ENST00000299440 GREM2Q9H772 168 aa8.03□□□□□ -1.12
RAG1-201ENST00000299440 NLRP1Q9C000 1473 aa8.03□□□□□ -1.12
RAG1-201ENST00000299440 BIVM-ERCC5R4GMW8 1640 aa8.03□□□□□ -1.12
RAG1-201ENST00000299440 A0A0G2JLW4 131 aa8.03□□□□□ -1.12
RAG1-201ENST00000299440 RAPGEF1Q13905 1077 aa8.03□□□□□ -1.12
RAG1-201ENST00000299440 CEP85Q6P2H3 762 aa8.03□□□□□ -1.12
RAG1-201ENST00000299440 RPS6KC1Q96S38 1066 aa8.03□□□□□ -1.12
RAG1-201ENST00000299440 IKBKGQ9Y6K9 419 aa8.03□□□□□ -1.12
RAG1-201ENST00000299440 IL6STP40189 918 aaPredicted RBP8.03□□□□□ -1.12
RAG1-201ENST00000299440 AOC3Q16853 763 aa8.03□□□□□ -1.12
RAG1-201ENST00000299440 KIF4BQ2VIQ3 1234 aa8.03□□□□□ -1.12
RAG1-201ENST00000299440 MIER3Q7Z3K6 550 aa8.03□□□□□ -1.12
RAG1-201ENST00000299440 TPH2Q8IWU9 490 aa8.03□□□□□ -1.12
RAG1-201ENST00000299440 USP14P54578 494 aa8.02□□□□□ -1.12
RAG1-201ENST00000299440 CCDC65Q8IXS2 484 aa8.02□□□□□ -1.12
RAG1-201ENST00000299440 RETREG2Q8NC44 543 aa8.02□□□□□ -1.12
RAG1-201ENST00000299440 SEC31BQ9NQW1 1179 aa8.02□□□□□ -1.12
RAG1-201ENST00000299440 HELLSQ9NRZ9 838 aa8.02□□□□□ -1.12
RAG1-201ENST00000299440 SOS1Q07889 1333 aaPredicted RBP8.02□□□□□ -1.12
RAG1-201ENST00000299440 KIF5CO60282 957 aa8.02□□□□□ -1.13
RAG1-201ENST00000299440 GAS7O60861 476 aa8.02□□□□□ -1.13
RAG1-201ENST00000299440 SASH1O94885 1247 aa8.02□□□□□ -1.13
RAG1-201ENST00000299440 USP17L8P0C7I0 530 aa8.02□□□□□ -1.13
RAG1-201ENST00000299440 PAFAH1B1P43034 410 aa8.02□□□□□ -1.13
RAG1-201ENST00000299440 MRE11P49959 708 aa8.02□□□□□ -1.13
RAG1-201ENST00000299440 GSTA5Q7RTV2 222 aa8.02□□□□□ -1.13
RAG1-201ENST00000299440 PIGBQ92521 554 aa8.02□□□□□ -1.13
RAG1-201ENST00000299440 PNMA3Q9UL41 463 aa8.02□□□□□ -1.13
RAG1-201ENST00000299440 POLIQ9UNA4 740 aa8.02□□□□□ -1.13
RAG1-201ENST00000299440 EFCAB6Q5THR3 1501 aa8.02□□□□□ -1.13
RAG1-201ENST00000299440 NEURL1BA8MQ27 555 aa8.02□□□□□ -1.13
RAG1-201ENST00000299440 TMOD1P28289 359 aa8.02□□□□□ -1.13
RAG1-201ENST00000299440 HLTFQ14527 1009 aaKnown RBP eCLIP8.02□□□□□ -1.13
RAG1-201ENST00000299440 FAM102BQ5T8I3 360 aa8.02□□□□□ -1.13
RAG1-201ENST00000299440 DEFB132Q7Z7B7 95 aa8.02□□□□□ -1.13
RAG1-201ENST00000299440 MICALL1Q8N3F8 863 aa8.02□□□□□ -1.13
RAG1-201ENST00000299440 PPP1R16BQ96T49 567 aa8.02□□□□□ -1.13
RAG1-201ENST00000299440 ESYT1Q9BSJ8 1104 aa8.02□□□□□ -1.13
RAG1-201ENST00000299440 BCCIPQ9P287 314 aaKnown RBP eCLIP8.02□□□□□ -1.13
RAG1-201ENST00000299440 EXOC7Q9UPT5 735 aa8.02□□□□□ -1.13
RAG1-201ENST00000299440 TTLL3Q9Y4R7 772 aa8.02□□□□□ -1.13
RAG1-201ENST00000299440 GCOM1H8Y6P7 765 aaPredicted RBP8.02□□□□□ -1.13
RAG1-201ENST00000299440 MYL3P08590 195 aa8.02□□□□□ -1.13
RAG1-201ENST00000299440 POLR2MP0CAP2 368 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms