RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 CNNM3Q8NE01 707 aa15.71■□□□□ 0.11
CDH8-201ENST00000299345 ESR2Q92731 530 aa15.71■□□□□ 0.11
CDH8-201ENST00000299345 RANBP6O60518 1105 aaKnown RBP15.7■□□□□ 0.1
CDH8-201ENST00000299345 ITPK1Q13572 414 aa15.7■□□□□ 0.1
CDH8-201ENST00000299345 THRAP3Q9Y2W1 955 aaKnown RBP15.7■□□□□ 0.1
CDH8-201ENST00000299345 DIS3L2Q8IYB7 885 aaKnown RBP15.7■□□□□ 0.1
CDH8-201ENST00000299345 SDR42E1Q8WUS8 393 aa15.7■□□□□ 0.1
CDH8-201ENST00000299345 TSC1Q92574 1164 aa15.7■□□□□ 0.1
CDH8-201ENST00000299345 NLRP12P59046 1061 aa15.69■□□□□ 0.1
CDH8-201ENST00000299345 MARCH10Q8NA82 808 aaPredicted RBP15.69■□□□□ 0.1
CDH8-201ENST00000299345 KCNJ14Q9UNX9 436 aa15.69■□□□□ 0.1
CDH8-201ENST00000299345 GSDMDP57764 484 aa15.69■□□□□ 0.1
CDH8-201ENST00000299345 PPARAQ07869 468 aa15.69■□□□□ 0.1
CDH8-201ENST00000299345 CCDC144BQ3MJ40 725 aa15.69■□□□□ 0.1
CDH8-201ENST00000299345 CCDC34Q96HJ3 373 aa15.69■□□□□ 0.1
CDH8-201ENST00000299345 IFNAR1P17181 557 aa15.69■□□□□ 0.1
CDH8-201ENST00000299345 DHX40Q8IX18 779 aaKnown RBP15.69■□□□□ 0.1
CDH8-201ENST00000299345 CMTR1Q8N1G2 835 aaKnown RBP15.69■□□□□ 0.1
CDH8-201ENST00000299345 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.69■□□□□ 0.1
CDH8-201ENST00000299345 IFNKQ9P0W0 207 aa15.69■□□□□ 0.1
CDH8-201ENST00000299345 SPATA31A1Q5TZJ5 1347 aa15.68■□□□□ 0.1
CDH8-201ENST00000299345 BTBD18B2RXH4 712 aa15.68■□□□□ 0.1
CDH8-201ENST00000299345 WDHD1O75717 1129 aaPredicted RBP15.68■□□□□ 0.1
CDH8-201ENST00000299345 NTSR2O95665 410 aa15.68■□□□□ 0.1
CDH8-201ENST00000299345 SERPINC1P01008 464 aa15.68■□□□□ 0.1
CDH8-201ENST00000299345 LMOD1P29536 600 aaPredicted RBP15.68■□□□□ 0.1
CDH8-201ENST00000299345 RBM6P78332 1123 aaKnown RBP15.68■□□□□ 0.1
CDH8-201ENST00000299345 LRRC8AQ8IWT6 810 aa15.68■□□□□ 0.1
CDH8-201ENST00000299345 CLIC6Q96NY7 704 aa15.68■□□□□ 0.1
CDH8-201ENST00000299345 DISP2A7MBM2 1401 aa15.68■□□□□ 0.1
CDH8-201ENST00000299345 PPP6R2O75170 966 aa15.68■□□□□ 0.1
CDH8-201ENST00000299345 TMC6Q7Z403 805 aa15.68■□□□□ 0.1
CDH8-201ENST00000299345 IQCA1Q86XH1 822 aa15.68■□□□□ 0.1
CDH8-201ENST00000299345 NOSTRINQ8IVI9 506 aa15.68■□□□□ 0.1
CDH8-201ENST00000299345 KRI1Q8N9T8 703 aaKnown RBP15.68■□□□□ 0.1
CDH8-201ENST00000299345 ATRNO75882 1429 aa15.68■□□□□ 0.1
CDH8-201ENST00000299345 CUTAO60888 179 aa15.68■□□□□ 0.1
CDH8-201ENST00000299345 DEXIO95424 95 aa15.68■□□□□ 0.1
CDH8-201ENST00000299345 FMNL1O95466 1100 aaPredicted RBP15.68■□□□□ 0.1
CDH8-201ENST00000299345 PIP4K2BP78356 416 aa15.68■□□□□ 0.1
CDH8-201ENST00000299345 AXDND1Q5T1B0 1012 aaPredicted RBP15.68■□□□□ 0.1
CDH8-201ENST00000299345 RIOK3O14730 519 aaKnown RBP15.67■□□□□ 0.1
CDH8-201ENST00000299345 ERFEQ4G0M1 354 aa15.67■□□□□ 0.1
CDH8-201ENST00000299345 ZNF654Q8IZM8 581 aa15.67■□□□□ 0.1
CDH8-201ENST00000299345 CCDC112Q8NEF3 446 aa15.67■□□□□ 0.1
CDH8-201ENST00000299345 STAG1Q8WVM7 1258 aa15.67■□□□□ 0.1
CDH8-201ENST00000299345 TRMT1Q9NXH9 659 aaKnown RBP15.67■□□□□ 0.1
CDH8-201ENST00000299345 KCNH3Q9ULD8 1083 aa15.67■□□□□ 0.1
CDH8-201ENST00000299345 PAPPAQ13219 1627 aa15.67■□□□□ 0.1
CDH8-201ENST00000299345 NKX2-3Q8TAU0 364 aa15.67■□□□□ 0.1
CDH8-201ENST00000299345 PNPLA7Q6ZV29 1317 aa15.67■□□□□ 0.1
CDH8-201ENST00000299345 SFPQP23246 707 aaKnown RBP eCLIP15.67■□□□□ 0.1
CDH8-201ENST00000299345 CATIPQ7Z7H3 387 aa15.67■□□□□ 0.1
CDH8-201ENST00000299345 FANCBQ8NB91 859 aa15.67■□□□□ 0.1
CDH8-201ENST00000299345 KCNQ2O43526 872 aa15.66■□□□□ 0.1
CDH8-201ENST00000299345 ARID5BQ14865 1188 aa15.66■□□□□ 0.1
CDH8-201ENST00000299345 PTPN14Q15678 1187 aa15.66■□□□□ 0.1
CDH8-201ENST00000299345 CEP131Q9UPN4 1083 aa15.66■□□□□ 0.1
CDH8-201ENST00000299345 XIRP1Q702N8 1843 aaKnown RBP15.66■□□□□ 0.1
CDH8-201ENST00000299345 KCNQ4P56696 695 aa15.66■□□□□ 0.1
CDH8-201ENST00000299345 UBE4AQ14139 1066 aa15.66■□□□□ 0.1
CDH8-201ENST00000299345 NTRK3Q16288 839 aa15.66■□□□□ 0.1
CDH8-201ENST00000299345 RILPL1Q5EBL4 403 aa15.66■□□□□ 0.1
CDH8-201ENST00000299345 SPECC1Q5M775 1068 aa15.66■□□□□ 0.1
CDH8-201ENST00000299345 TIGD1Q96MW7 591 aa15.66■□□□□ 0.1
CDH8-201ENST00000299345 PRDM1O75626 825 aa15.66■□□□□ 0.1
CDH8-201ENST00000299345 IFIT1BQ5T764 474 aaKnown RBP15.66■□□□□ 0.1
CDH8-201ENST00000299345 NLRP3Q96P20 1036 aa15.66■□□□□ 0.1
CDH8-201ENST00000299345 XPO4Q9C0E2 1151 aaKnown RBP15.66■□□□□ 0.1
CDH8-201ENST00000299345 BRMS1Q9HCU9 246 aa15.66■□□□□ 0.1
CDH8-201ENST00000299345 TOGARAM1Q9Y4F4 1720 aa15.66■□□□□ 0.1
CDH8-201ENST00000299345 UBE2Q2LH0YL09 131 aa15.65■□□□□ 0.1
CDH8-201ENST00000299345 CDK11BP21127 795 aaKnown RBP15.65■□□□□ 0.1
CDH8-201ENST00000299345 PNOCQ13519 176 aa15.65■□□□□ 0.1
CDH8-201ENST00000299345 CFAP100Q494V2 611 aa15.65■□□□□ 0.1
CDH8-201ENST00000299345 PDILTQ8N807 584 aa15.65■□□□□ 0.1
CDH8-201ENST00000299345 TNKSO95271 1327 aa15.65■□□□□ 0.1
CDH8-201ENST00000299345 STK36Q9NRP7 1315 aa15.65■□□□□ 0.1
CDH8-201ENST00000299345 CLEC4GQ6UXB4 293 aa15.65■□□□□ 0.1
CDH8-201ENST00000299345 NBPF5PQ86XG9 351 aaPredicted RBP15.65■□□□□ 0.1
CDH8-201ENST00000299345 RGS22Q8NE09 1264 aa15.65■□□□□ 0.1
CDH8-201ENST00000299345 ZPR1O75312 459 aa15.65■□□□□ 0.1
CDH8-201ENST00000299345 U2AF2P26368 475 aaKnown RBP eCLIP15.65■□□□□ 0.1
CDH8-201ENST00000299345 FAM98CQ17RN3 349 aaKnown RBP15.65■□□□□ 0.1
CDH8-201ENST00000299345 SETDB2Q96T68 719 aa15.65■□□□□ 0.1
CDH8-201ENST00000299345 FAM217BQ9NTX9 383 aaPredicted RBP15.65■□□□□ 0.1
CDH8-201ENST00000299345 RTL9Q8NET4 1388 aa15.64■□□□□ 0.09
CDH8-201ENST00000299345 CBFA2T2O43439 604 aa15.64■□□□□ 0.09
CDH8-201ENST00000299345 MMP1P03956 469 aa15.64■□□□□ 0.09
CDH8-201ENST00000299345 DHX8Q14562 1220 aaKnown RBP15.64■□□□□ 0.09
CDH8-201ENST00000299345 CEP135Q66GS9 1140 aa15.64■□□□□ 0.09
CDH8-201ENST00000299345 SHC4Q6S5L8 630 aa15.64■□□□□ 0.09
CDH8-201ENST00000299345 BCL11BQ9C0K0 894 aaPredicted RBP15.64■□□□□ 0.09
CDH8-201ENST00000299345 GUCY1A2P33402 732 aa15.64■□□□□ 0.09
CDH8-201ENST00000299345 CRACR2BQ8N4Y2 399 aaPredicted RBP15.64■□□□□ 0.09
CDH8-201ENST00000299345 CABP5Q9NP86 173 aa15.64■□□□□ 0.09
CDH8-201ENST00000299345 PAXBP1Q9Y5B6 917 aa15.64■□□□□ 0.09
CDH8-201ENST00000299345 LAMA4Q16363 1823 aa15.64■□□□□ 0.09
CDH8-201ENST00000299345 MYL5Q02045 173 aa15.64■□□□□ 0.09
CDH8-201ENST00000299345 MROH7-TTC4A0A0A0MT08 1334 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms