RNA–Protein interactions for RNA: ENST00000299238.6

HPS6-201, Transcript of HPS6, biogenesis of lysosomal organelles complex 2 subunit 3, humanhuman

APPRIS P1 BASIC

Gene HPS6, Length 2,649 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS6-201ENST00000299238 UQCRFS1P1P0C7P4 283 aa23.26■■□□□ 1.31
HPS6-201ENST00000299238 FGFR2P21802 821 aa23.26■■□□□ 1.31
HPS6-201ENST00000299238 NYAP1Q6ZVC0 841 aa23.26■■□□□ 1.31
HPS6-201ENST00000299238 RALYLQ86SE5 291 aaKnown RBP23.26■■□□□ 1.31
HPS6-201ENST00000299238 CLIP2Q9UDT6 1046 aa23.26■■□□□ 1.31
HPS6-201ENST00000299238 STX1AQ16623 288 aa23.25■■□□□ 1.31
HPS6-201ENST00000299238 MARCH10Q8NA82 808 aaPredicted RBP23.25■■□□□ 1.31
HPS6-201ENST00000299238 PCDHA7Q9UN72 937 aa23.25■■□□□ 1.31
HPS6-201ENST00000299238 LOC102724428A0A0B4J2F2 783 aa23.25■■□□□ 1.31
HPS6-201ENST00000299238 SIK1P57059 783 aa23.25■■□□□ 1.31
HPS6-201ENST00000299238 UBE3CQ15386 1083 aa23.25■■□□□ 1.31
HPS6-201ENST00000299238 ZNF532Q9HCE3 1301 aa23.24■■□□□ 1.31
HPS6-201ENST00000299238 C4AP0C0L4 1744 aa23.24■■□□□ 1.31
HPS6-201ENST00000299238 C4BP0C0L5 1744 aa23.24■■□□□ 1.31
HPS6-201ENST00000299238 KINO60870 393 aaKnown RBP23.24■■□□□ 1.31
HPS6-201ENST00000299238 APPP05067 770 aa23.24■■□□□ 1.31
HPS6-201ENST00000299238 FBXO18Q8NFZ0 1043 aa23.24■■□□□ 1.31
HPS6-201ENST00000299238 UTP14AQ9BVJ6 771 aaKnown RBP23.24■■□□□ 1.31
HPS6-201ENST00000299238 A0A1B0GVL5 298 aa23.24■■□□□ 1.31
HPS6-201ENST00000299238 GOLGA6L19H0YKK7 550 aa23.24■■□□□ 1.31
HPS6-201ENST00000299238 PDE6AP16499 860 aa23.24■■□□□ 1.31
HPS6-201ENST00000299238 ITPK1Q13572 414 aa23.24■■□□□ 1.31
HPS6-201ENST00000299238 NKX2-3Q8TAU0 364 aa23.24■■□□□ 1.31
HPS6-201ENST00000299238 WWC3Q9ULE0 1092 aa23.24■■□□□ 1.31
HPS6-201ENST00000299238 CAMTA2O94983 1202 aa23.23■■□□□ 1.31
HPS6-201ENST00000299238 ZSCAN26Q16670 478 aa23.23■■□□□ 1.31
HPS6-201ENST00000299238 FMR1NBQ8N0W7 255 aaPredicted RBP23.23■■□□□ 1.31
HPS6-201ENST00000299238 C8orf76Q96K31 380 aa23.23■■□□□ 1.31
HPS6-201ENST00000299238 ORC3Q9UBD5 711 aaPredicted RBP23.23■■□□□ 1.31
HPS6-201ENST00000299238 SARM1Q6SZW1 724 aa23.23■■□□□ 1.31
HPS6-201ENST00000299238 TXLNBQ8N3L3 684 aa23.23■■□□□ 1.31
HPS6-201ENST00000299238 LINC00301Q8NCQ3 95 aa23.23■■□□□ 1.31
HPS6-201ENST00000299238 ADALQ6DHV7 355 aa23.22■■□□□ 1.31
HPS6-201ENST00000299238 SEC31BQ9NQW1 1179 aa23.22■■□□□ 1.31
HPS6-201ENST00000299238 KCNG1Q9UIX4 513 aa23.22■■□□□ 1.31
HPS6-201ENST00000299238 CLIC4Q9Y696 253 aa23.22■■□□□ 1.31
HPS6-201ENST00000299238 SLC5A1P13866 664 aa23.22■■□□□ 1.31
HPS6-201ENST00000299238 CDC25BP30305 580 aa23.22■■□□□ 1.31
HPS6-201ENST00000299238 A0A1W2PQ27 194 aa23.21■■□□□ 1.31
HPS6-201ENST00000299238 A0A1W2PQ64 194 aa23.21■■□□□ 1.31
HPS6-201ENST00000299238 A0A1W2PQD8 194 aa23.21■■□□□ 1.31
HPS6-201ENST00000299238 TCRBV5S4A2TA0A5A2 114 aa23.21■■□□□ 1.31
HPS6-201ENST00000299238 TBC1D10CQ8IV04 446 aa23.21■■□□□ 1.31
HPS6-201ENST00000299238 MRPS27Q92552 414 aaKnown RBP23.21■■□□□ 1.31
HPS6-201ENST00000299238 MPHOSPH8Q99549 860 aa23.21■■□□□ 1.31
HPS6-201ENST00000299238 RXRAP19793 462 aa23.21■■□□□ 1.31
HPS6-201ENST00000299238 PARP10Q53GL7 1025 aa23.21■■□□□ 1.31
HPS6-201ENST00000299238 POLR3EQ9NVU0 708 aa23.21■■□□□ 1.31
HPS6-201ENST00000299238 SNAP23O00161 211 aa23.2■■□□□ 1.3
HPS6-201ENST00000299238 COL5A3P25940 1745 aaPredicted RBP23.2■■□□□ 1.3
HPS6-201ENST00000299238 TEX35Q5T0J7 233 aa23.2■■□□□ 1.3
HPS6-201ENST00000299238 LRRC8AQ8IWT6 810 aa23.2■■□□□ 1.3
HPS6-201ENST00000299238 SPATA5Q8NB90 893 aa23.2■■□□□ 1.3
HPS6-201ENST00000299238 BCORQ6W2J9 1755 aa23.2■■□□□ 1.3
HPS6-201ENST00000299238 SPATA31A5Q5VU36 1347 aa23.2■■□□□ 1.3
HPS6-201ENST00000299238 SPATA31A7Q8IWB4 1347 aa23.2■■□□□ 1.3
HPS6-201ENST00000299238 CHD4Q14839 1912 aa23.2■■□□□ 1.3
HPS6-201ENST00000299238 BECN2A8MW95 431 aa23.2■■□□□ 1.3
HPS6-201ENST00000299238 RASGRF1Q13972 1273 aa23.19■■□□□ 1.3
HPS6-201ENST00000299238 MYSM1Q5VVJ2 828 aa23.19■■□□□ 1.3
HPS6-201ENST00000299238 BRAPQ7Z569 592 aa23.19■■□□□ 1.3
HPS6-201ENST00000299238 GPATCH11Q8N954 259 aa23.19■■□□□ 1.3
HPS6-201ENST00000299238 KIF28PB7ZC32 967 aa23.19■■□□□ 1.3
HPS6-201ENST00000299238 CPLX1O14810 134 aa23.19■■□□□ 1.3
HPS6-201ENST00000299238 YEATS4O95619 227 aa23.19■■□□□ 1.3
HPS6-201ENST00000299238 NTSR2O95665 410 aa23.19■■□□□ 1.3
HPS6-201ENST00000299238 NDUFA8P51970 172 aa23.19■■□□□ 1.3
HPS6-201ENST00000299238 TRDNQ13061 729 aa23.19■■□□□ 1.3
HPS6-201ENST00000299238 DHX40Q8IX18 779 aaKnown RBP23.19■■□□□ 1.3
HPS6-201ENST00000299238 ANO10Q9NW15 660 aa23.19■■□□□ 1.3
HPS6-201ENST00000299238 NIP7Q9Y221 180 aaKnown RBP eCLIP23.19■■□□□ 1.3
HPS6-201ENST00000299238 LTBP4Q8N2S1 1624 aa23.19■■□□□ 1.3
HPS6-201ENST00000299238 CCDC152Q4G0S7 254 aa23.18■■□□□ 1.3
HPS6-201ENST00000299238 CYB5R4Q7L1T6 521 aa23.18■■□□□ 1.3
HPS6-201ENST00000299238 AIFM3Q96NN9 605 aa23.18■■□□□ 1.3
HPS6-201ENST00000299238 SDF4Q9BRK5 362 aa23.18■■□□□ 1.3
HPS6-201ENST00000299238 NEDD4P46934 1319 aa23.18■■□□□ 1.3
HPS6-201ENST00000299238 SEC31AO94979 1220 aaKnown RBP23.18■■□□□ 1.3
HPS6-201ENST00000299238 SKILP12757 684 aa23.18■■□□□ 1.3
HPS6-201ENST00000299238 STK38Q15208 465 aa23.18■■□□□ 1.3
HPS6-201ENST00000299238 SF3A1Q15459 793 aaKnown RBP23.18■■□□□ 1.3
HPS6-201ENST00000299238 ARHGAP29Q52LW3 1261 aa23.18■■□□□ 1.3
HPS6-201ENST00000299238 KCNG4Q8TDN1 519 aa23.18■■□□□ 1.3
HPS6-201ENST00000299238 AIDAQ96BJ3 306 aa23.18■■□□□ 1.3
HPS6-201ENST00000299238 MRFAP1L1Q96HT8 127 aa23.18■■□□□ 1.3
HPS6-201ENST00000299238 ANGEL1Q9UNK9 670 aaKnown RBP23.18■■□□□ 1.3
HPS6-201ENST00000299238 KIF23Q02241 960 aaPredicted RBP23.17■■□□□ 1.3
HPS6-201ENST00000299238 AOPEPQ8N6M6 819 aa23.17■■□□□ 1.3
HPS6-201ENST00000299238 DRC1Q96MC2 740 aa23.17■■□□□ 1.3
HPS6-201ENST00000299238 STRBPQ96SI9 672 aaKnown RBP23.17■■□□□ 1.3
HPS6-201ENST00000299238 MYCBPQ99417 103 aaPredicted RBP23.17■■□□□ 1.3
HPS6-201ENST00000299238 NCAPGQ9BPX3 1015 aa23.17■■□□□ 1.3
HPS6-201ENST00000299238 RTL9Q8NET4 1388 aa23.17■■□□□ 1.3
HPS6-201ENST00000299238 NUTM2BA6NNL0 878 aaPredicted RBP23.17■■□□□ 1.3
HPS6-201ENST00000299238 NUTM2EB1AL46 878 aaPredicted RBP23.17■■□□□ 1.3
HPS6-201ENST00000299238 FILIP1Q7Z7B0 1213 aa23.17■■□□□ 1.3
HPS6-201ENST00000299238 SRLQ86TD4 932 aa23.17■■□□□ 1.3
HPS6-201ENST00000299238 NUTM2AQ8IVF1 878 aaPredicted RBP23.17■■□□□ 1.3
HPS6-201ENST00000299238 SH2B2O14492 632 aaPredicted RBP23.16■■□□□ 1.3
HPS6-201ENST00000299238 SART3Q15020 963 aaKnown RBP23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms