RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 MACROD2A1Z1Q3 448 aa5.45□□□□□ -1.54
UBR1-201ENST00000290650 HIBADHP31937 336 aaKnown RBP5.45□□□□□ -1.54
UBR1-201ENST00000290650 FAM160A1Q05DH4 1040 aa5.45□□□□□ -1.54
UBR1-201ENST00000290650 SPA17Q15506 151 aa5.45□□□□□ -1.54
UBR1-201ENST00000290650 USH1GQ495M9 461 aa5.45□□□□□ -1.54
UBR1-201ENST00000290650 RASGRP4Q8TDF6 673 aa5.45□□□□□ -1.54
UBR1-201ENST00000290650 CALML4Q96GE6 196 aa5.45□□□□□ -1.54
UBR1-201ENST00000290650 KCNH3Q9ULD8 1083 aa5.45□□□□□ -1.54
UBR1-201ENST00000290650 PYCARDQ9ULZ3 195 aa5.45□□□□□ -1.54
UBR1-201ENST00000290650 ZSCAN12O43309 604 aa5.45□□□□□ -1.54
UBR1-201ENST00000290650 HOXB7P09629 217 aa5.45□□□□□ -1.54
UBR1-201ENST00000290650 PDE6AP16499 860 aa5.45□□□□□ -1.54
UBR1-201ENST00000290650 NOP2P46087 812 aaKnown RBP5.45□□□□□ -1.54
UBR1-201ENST00000290650 DOK7Q18PE1 504 aa5.45□□□□□ -1.54
UBR1-201ENST00000290650 CLSTN2Q9H4D0 955 aa5.45□□□□□ -1.54
UBR1-201ENST00000290650 SRP68Q9UHB9 627 aaKnown RBP5.45□□□□□ -1.54
UBR1-201ENST00000290650 MAST3O60307 1309 aa5.45□□□□□ -1.54
UBR1-201ENST00000290650 BTBD18B2RXH4 712 aa5.44□□□□□ -1.54
UBR1-201ENST00000290650 DYNC1I1O14576 645 aa5.44□□□□□ -1.54
UBR1-201ENST00000290650 CHMP2AO43633 222 aa5.44□□□□□ -1.54
UBR1-201ENST00000290650 PDIA3P30101 505 aaKnown RBP5.44□□□□□ -1.54
UBR1-201ENST00000290650 CRKLP46109 303 aaKnown RBP5.44□□□□□ -1.54
UBR1-201ENST00000290650 ZNF397Q8NF99 534 aaPredicted RBP5.44□□□□□ -1.54
UBR1-201ENST00000290650 ZNF287Q9HBT7 754 aa5.44□□□□□ -1.54
UBR1-201ENST00000290650 ARAP3Q8WWN8 1544 aa5.44□□□□□ -1.54
UBR1-201ENST00000290650 ZNF75DP51815 510 aa5.44□□□□□ -1.54
UBR1-201ENST00000290650 TRAPPC3LQ5T215 181 aa5.44□□□□□ -1.54
UBR1-201ENST00000290650 TEX11Q8IYF3 940 aa5.44□□□□□ -1.54
UBR1-201ENST00000290650 KRI1Q8N9T8 703 aaKnown RBP5.44□□□□□ -1.54
UBR1-201ENST00000290650 ZBTB38Q8NAP3 1195 aaPredicted RBP5.44□□□□□ -1.54
UBR1-201ENST00000290650 LPIN2Q92539 896 aa5.44□□□□□ -1.54
UBR1-201ENST00000290650 MAP4K1Q92918 833 aa5.44□□□□□ -1.54
UBR1-201ENST00000290650 GOPCQ9HD26 462 aa5.44□□□□□ -1.54
UBR1-201ENST00000290650 STAP2Q9UGK3 403 aa5.44□□□□□ -1.54
UBR1-201ENST00000290650 CDC42BPGQ6DT37 1551 aa5.44□□□□□ -1.54
UBR1-201ENST00000290650 PREX1Q8TCU6 1659 aa5.44□□□□□ -1.54
UBR1-201ENST00000290650 CHRNDQ07001 517 aa5.44□□□□□ -1.54
UBR1-201ENST00000290650 ARID5BQ14865 1188 aa5.44□□□□□ -1.54
UBR1-201ENST00000290650 TMEM266Q2M3C6 531 aa5.44□□□□□ -1.54
UBR1-201ENST00000290650 HS1BP3Q53T59 392 aa5.44□□□□□ -1.54
UBR1-201ENST00000290650 DYMQ7RTS9 669 aa5.44□□□□□ -1.54
UBR1-201ENST00000290650 CNBD1Q8NA66 436 aa5.44□□□□□ -1.54
UBR1-201ENST00000290650 DESI2Q9BSY9 194 aa5.44□□□□□ -1.54
UBR1-201ENST00000290650 CCDC113Q9H0I3 377 aa5.44□□□□□ -1.54
UBR1-201ENST00000290650 RABEP2Q9H5N1 569 aa5.44□□□□□ -1.54
UBR1-201ENST00000290650 TMOD2Q9NZR1 351 aa5.44□□□□□ -1.54
UBR1-201ENST00000290650 ZDHHC9Q9Y397 364 aa5.44□□□□□ -1.54
UBR1-201ENST00000290650 MTX1Q13505 466 aa5.44□□□□□ -1.54
UBR1-201ENST00000290650 IFNL3Q8IZI9 196 aa5.44□□□□□ -1.54
UBR1-201ENST00000290650 CGNQ9P2M7 1197 aaKnown RBP5.44□□□□□ -1.54
UBR1-201ENST00000290650 AOX1Q06278 1338 aa5.44□□□□□ -1.54
UBR1-201ENST00000290650 RGS12O14924 1447 aa5.44□□□□□ -1.54
UBR1-201ENST00000290650 TCHHQ07283 1943 aa5.44□□□□□ -1.54
UBR1-201ENST00000290650 TMCO5BA8MYB1 307 aa5.44□□□□□ -1.54
UBR1-201ENST00000290650 TXKP42681 527 aa5.44□□□□□ -1.54
UBR1-201ENST00000290650 GSDMDP57764 484 aa5.44□□□□□ -1.54
UBR1-201ENST00000290650 ERFEQ4G0M1 354 aa5.44□□□□□ -1.54
UBR1-201ENST00000290650 ZC3H12CQ9C0D7 883 aaKnown RBP5.44□□□□□ -1.54
UBR1-201ENST00000290650 DNAJC21Q5F1R6 531 aaKnown RBP5.44□□□□□ -1.54
UBR1-201ENST00000290650 ZNF569Q5MCW4 686 aa5.44□□□□□ -1.54
UBR1-201ENST00000290650 USPL1Q5W0Q7 1092 aa5.44□□□□□ -1.54
UBR1-201ENST00000290650 C11orf57Q6ZUT1 292 aaPredicted RBP5.44□□□□□ -1.54
UBR1-201ENST00000290650 ZNF804AQ7Z570 1209 aa5.44□□□□□ -1.54
UBR1-201ENST00000290650 FCHSD1Q86WN1 690 aa5.44□□□□□ -1.54
UBR1-201ENST00000290650 XPO4Q9C0E2 1151 aaKnown RBP5.44□□□□□ -1.54
UBR1-201ENST00000290650 SERTAD1Q9UHV2 236 aa5.44□□□□□ -1.54
UBR1-201ENST00000290650 PCDHA7Q9UN72 937 aa5.44□□□□□ -1.54
UBR1-201ENST00000290650 NRKQ7Z2Y5 1582 aa5.43□□□□□ -1.54
UBR1-201ENST00000290650 DDX39AO00148 427 aaKnown RBP5.43□□□□□ -1.54
UBR1-201ENST00000290650 SF3A3Q12874 501 aaKnown RBP eCLIP5.43□□□□□ -1.54
UBR1-201ENST00000290650 PRKG1Q13976 671 aa5.43□□□□□ -1.54
UBR1-201ENST00000290650 NPHP4O75161 1426 aaPredicted RBP5.43□□□□□ -1.54
UBR1-201ENST00000290650 YEATS4O95619 227 aa5.43□□□□□ -1.54
UBR1-201ENST00000290650 PFKFB1P16118 471 aa5.43□□□□□ -1.54
UBR1-201ENST00000290650 CASP1P29466 404 aa5.43□□□□□ -1.54
UBR1-201ENST00000290650 FANCCQ00597 558 aa5.43□□□□□ -1.54
UBR1-201ENST00000290650 NR5A1Q13285 461 aa5.43□□□□□ -1.54
UBR1-201ENST00000290650 SCARF1Q14162 830 aa5.43□□□□□ -1.54
UBR1-201ENST00000290650 TTLL12Q14166 644 aaPredicted RBP5.43□□□□□ -1.54
UBR1-201ENST00000290650 TBC1D10BQ4KMP7 808 aaPredicted RBP5.43□□□□□ -1.54
UBR1-201ENST00000290650 CCDC148Q8NFR7 591 aa5.43□□□□□ -1.54
UBR1-201ENST00000290650 GDAP1L1Q96MZ0 367 aa5.43□□□□□ -1.54
UBR1-201ENST00000290650 FAM107BQ9H098 131 aa5.43□□□□□ -1.54
UBR1-201ENST00000290650 TSPYL1Q9H0U9 437 aa5.43□□□□□ -1.54
UBR1-201ENST00000290650 ARHGEF28Q8N1W1 1705 aaKnown RBP5.43□□□□□ -1.54
UBR1-201ENST00000290650 TFAP4Q01664 338 aa5.43□□□□□ -1.54
UBR1-201ENST00000290650 LEKR1Q6ZMV7 388 aa5.43□□□□□ -1.54
UBR1-201ENST00000290650 LRRC47Q8N1G4 583 aaKnown RBP5.43□□□□□ -1.54
UBR1-201ENST00000290650 PGBD1Q96JS3 809 aa5.43□□□□□ -1.54
UBR1-201ENST00000290650 TMEM110-MUSTN1A8MSY1 372 aa5.43□□□□□ -1.54
UBR1-201ENST00000290650 H0YHG0 523 aa5.43□□□□□ -1.54
UBR1-201ENST00000290650 DDIT3P35638 169 aa5.43□□□□□ -1.54
UBR1-201ENST00000290650 PPARAQ07869 468 aa5.43□□□□□ -1.54
UBR1-201ENST00000290650 DTHD1Q6ZMT9 781 aa5.43□□□□□ -1.54
UBR1-201ENST00000290650 BABAM1Q9NWV8 329 aa5.43□□□□□ -1.54
UBR1-201ENST00000290650 BIN2Q9UBW5 565 aaPredicted RBP5.43□□□□□ -1.54
UBR1-201ENST00000290650 SETBP1Q9Y6X0 1596 aa5.43□□□□□ -1.54
UBR1-201ENST00000290650 KIF24Q5T7B8 1368 aa5.43□□□□□ -1.54
UBR1-201ENST00000290650 ELF2Q15723 593 aa5.43□□□□□ -1.54
UBR1-201ENST00000290650 SYCP3Q8IZU3 236 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms