RNA–Protein interactions for RNA: ENST00000282268.7

XRCC4-201, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRCC4, Length 1,696 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-201ENST00000282268 HHIPL2Q6UWX4 724 aa13.48□□□□□ -0.25
XRCC4-201ENST00000282268 Q6ZUG5 572 aa13.48□□□□□ -0.25
XRCC4-201ENST00000282268 ZMYM6O95789 1325 aa13.48□□□□□ -0.25
XRCC4-201ENST00000282268 NEDD4P46934 1319 aa13.48□□□□□ -0.25
XRCC4-201ENST00000282268 B4E1Z4 1266 aa13.47□□□□□ -0.25
XRCC4-201ENST00000282268 TNIP1Q15025 636 aa13.47□□□□□ -0.25
XRCC4-201ENST00000282268 AKNAD1Q5T1N1 836 aa13.47□□□□□ -0.25
XRCC4-201ENST00000282268 APOBEC3HQ6NTF7 200 aaKnown RBP13.47□□□□□ -0.25
XRCC4-201ENST00000282268 GIMAP6Q6P9H5 292 aa13.47□□□□□ -0.25
XRCC4-201ENST00000282268 MFSD6Q6ZSS7 791 aa13.47□□□□□ -0.25
XRCC4-201ENST00000282268 NCOA7Q8NI08 942 aa13.47□□□□□ -0.25
XRCC4-201ENST00000282268 NKX2-3Q8TAU0 364 aa13.47□□□□□ -0.25
XRCC4-201ENST00000282268 SLKQ9H2G2 1235 aaPredicted RBP13.47□□□□□ -0.25
XRCC4-201ENST00000282268 HDAC9Q9UKV0 1011 aa13.47□□□□□ -0.25
XRCC4-201ENST00000282268 NAP1L2Q9ULW6 460 aaPredicted RBP13.47□□□□□ -0.25
XRCC4-201ENST00000282268 SHTN1A0MZ66 631 aa13.47□□□□□ -0.25
XRCC4-201ENST00000282268 PRC1O43663 620 aa13.47□□□□□ -0.25
XRCC4-201ENST00000282268 PRDM1O75626 825 aa13.47□□□□□ -0.25
XRCC4-201ENST00000282268 GPR162Q16538 588 aa13.47□□□□□ -0.25
XRCC4-201ENST00000282268 DHX32Q7L7V1 743 aaKnown RBP13.47□□□□□ -0.25
XRCC4-201ENST00000282268 CERS3Q8IU89 383 aa13.47□□□□□ -0.25
XRCC4-201ENST00000282268 OGFOD1Q8N543 542 aa13.47□□□□□ -0.25
XRCC4-201ENST00000282268 ZDHHC15Q96MV8 337 aa13.47□□□□□ -0.25
XRCC4-201ENST00000282268 TDRD3Q9H7E2 651 aaKnown RBP13.47□□□□□ -0.25
XRCC4-201ENST00000282268 SERPINA10Q9UK55 444 aa13.47□□□□□ -0.25
XRCC4-201ENST00000282268 FLT1P17948 1338 aa13.46□□□□□ -0.25
XRCC4-201ENST00000282268 MYO3BQ8WXR4 1341 aa13.46□□□□□ -0.25
XRCC4-201ENST00000282268 HMGB1P09429 215 aaKnown RBP13.46□□□□□ -0.26
XRCC4-201ENST00000282268 LMNB1P20700 586 aa13.46□□□□□ -0.26
XRCC4-201ENST00000282268 MCM2P49736 904 aa13.46□□□□□ -0.26
XRCC4-201ENST00000282268 TCP10Q12799 353 aa13.46□□□□□ -0.26
XRCC4-201ENST00000282268 RBM26Q5T8P6 1007 aaKnown RBP13.46□□□□□ -0.26
XRCC4-201ENST00000282268 CYB5R4Q7L1T6 521 aa13.46□□□□□ -0.26
XRCC4-201ENST00000282268 AMOTL1Q8IY63 956 aa13.46□□□□□ -0.26
XRCC4-201ENST00000282268 DYNLL2Q96FJ2 89 aa13.46□□□□□ -0.26
XRCC4-201ENST00000282268 TMX3Q96JJ7 454 aa13.46□□□□□ -0.26
XRCC4-201ENST00000282268 DDX4Q9NQI0 724 aaKnown RBP13.46□□□□□ -0.26
XRCC4-201ENST00000282268 GPHNQ9NQX3 736 aaPredicted RBP13.46□□□□□ -0.26
XRCC4-201ENST00000282268 ARPP21Q9UBL0 812 aaPredicted RBP13.46□□□□□ -0.26
XRCC4-201ENST00000282268 ZNF541Q9H0D2 1346 aa13.46□□□□□ -0.26
XRCC4-201ENST00000282268 ARFGEF1Q9Y6D6 1849 aa13.45□□□□□ -0.26
XRCC4-201ENST00000282268 CLRN2A0PK11 232 aa13.45□□□□□ -0.26
XRCC4-201ENST00000282268 SOCS7O14512 581 aa13.45□□□□□ -0.26
XRCC4-201ENST00000282268 DTNBO60941 627 aa13.45□□□□□ -0.26
XRCC4-201ENST00000282268 KDM4AO75164 1064 aa13.45□□□□□ -0.26
XRCC4-201ENST00000282268 MCM5P33992 734 aa13.45□□□□□ -0.26
XRCC4-201ENST00000282268 HDLBPQ00341 1268 aaKnown RBP13.45□□□□□ -0.26
XRCC4-201ENST00000282268 STK3Q13188 491 aa13.45□□□□□ -0.26
XRCC4-201ENST00000282268 TOB2Q14106 344 aaPredicted RBP13.45□□□□□ -0.26
XRCC4-201ENST00000282268 DLGAP5Q15398 846 aa13.45□□□□□ -0.26
XRCC4-201ENST00000282268 MB21D2Q8IYB1 491 aaPredicted RBP13.45□□□□□ -0.26
XRCC4-201ENST00000282268 STAG1Q8WVM7 1258 aa13.45□□□□□ -0.26
XRCC4-201ENST00000282268 BRF1Q92994 677 aa13.45□□□□□ -0.26
XRCC4-201ENST00000282268 PRMT6Q96LA8 375 aaPredicted RBP13.45□□□□□ -0.26
XRCC4-201ENST00000282268 GMLQ99445 158 aa13.45□□□□□ -0.26
XRCC4-201ENST00000282268 RNF181Q9P0P0 153 aa13.45□□□□□ -0.26
XRCC4-201ENST00000282268 LIMCH1Q9UPQ0 1083 aa13.45□□□□□ -0.26
XRCC4-201ENST00000282268 ZNF646O15015 1829 aaPredicted RBP13.44□□□□□ -0.26
XRCC4-201ENST00000282268 WDHD1O75717 1129 aaPredicted RBP13.44□□□□□ -0.26
XRCC4-201ENST00000282268 LARGE1O95461 756 aa13.44□□□□□ -0.26
XRCC4-201ENST00000282268 SLC3A2P08195 630 aaKnown RBP13.44□□□□□ -0.26
XRCC4-201ENST00000282268 GMPSP49915 693 aaPredicted RBP13.44□□□□□ -0.26
XRCC4-201ENST00000282268 PLCD1P51178 756 aa13.44□□□□□ -0.26
XRCC4-201ENST00000282268 ANTXR2P58335 489 aa13.44□□□□□ -0.26
XRCC4-201ENST00000282268 EXOSC10Q01780 885 aaKnown RBP13.44□□□□□ -0.26
XRCC4-201ENST00000282268 NFIAQ12857 509 aa13.44□□□□□ -0.26
XRCC4-201ENST00000282268 AGBL3Q8NEM8 1001 aa13.44□□□□□ -0.26
XRCC4-201ENST00000282268 ZKSCAN3Q9BRR0 538 aa13.44□□□□□ -0.26
XRCC4-201ENST00000282268 MRIQ9BWK5 157 aa13.44□□□□□ -0.26
XRCC4-201ENST00000282268 RNF41Q9H4P4 317 aaPredicted RBP13.44□□□□□ -0.26
XRCC4-201ENST00000282268 MKRN1Q9UHC7 482 aaKnown RBP13.44□□□□□ -0.26
XRCC4-201ENST00000282268 TPCN1Q9ULQ1 816 aa13.44□□□□□ -0.26
XRCC4-201ENST00000282268 BAZ2AQ9UIF9 1905 aaKnown RBP13.44□□□□□ -0.26
XRCC4-201ENST00000282268 FZD9O00144 591 aa13.44□□□□□ -0.26
XRCC4-201ENST00000282268 RANBP6O60518 1105 aaKnown RBP13.44□□□□□ -0.26
XRCC4-201ENST00000282268 APOBRQ0VD83 1088 aa13.44□□□□□ -0.26
XRCC4-201ENST00000282268 ANKRD1Q15327 319 aa13.44□□□□□ -0.26
XRCC4-201ENST00000282268 SBK1Q52WX2 424 aa13.44□□□□□ -0.26
XRCC4-201ENST00000282268 C12orf60Q5U649 245 aa13.44□□□□□ -0.26
XRCC4-201ENST00000282268 ZFPM1Q8IX07 1006 aa13.44□□□□□ -0.26
XRCC4-201ENST00000282268 NECAB1Q8N987 351 aa13.44□□□□□ -0.26
XRCC4-201ENST00000282268 KRT23Q9C075 422 aa13.44□□□□□ -0.26
XRCC4-201ENST00000282268 CNNM2Q9H8M5 875 aa13.44□□□□□ -0.26
XRCC4-201ENST00000282268 ANAPC4Q9UJX5 808 aa13.44□□□□□ -0.26
XRCC4-201ENST00000282268 TCP10L2B9ZVM9 353 aa13.43□□□□□ -0.26
XRCC4-201ENST00000282268 FAM47AQ5JRC9 791 aa13.43□□□□□ -0.26
XRCC4-201ENST00000282268 RAB11FIP4Q86YS3 637 aa13.43□□□□□ -0.26
XRCC4-201ENST00000282268 CCDC83Q8IWF9 413 aa13.43□□□□□ -0.26
XRCC4-201ENST00000282268 SLC44A5Q8NCS7 719 aa13.43□□□□□ -0.26
XRCC4-201ENST00000282268 VEZTQ9HBM0 779 aa13.43□□□□□ -0.26
XRCC4-201ENST00000282268 ZSWIM5Q9P217 1185 aa13.43□□□□□ -0.26
XRCC4-201ENST00000282268 GOLGB1Q14789 3259 aaKnown RBP13.43□□□□□ -0.26
XRCC4-201ENST00000282268 SPDYE2BA6NHP3 402 aa13.42□□□□□ -0.26
XRCC4-201ENST00000282268 SPDYE6P0CI01 402 aa13.42□□□□□ -0.26
XRCC4-201ENST00000282268 ME3Q16798 604 aa13.42□□□□□ -0.26
XRCC4-201ENST00000282268 C9orf131Q5VYM1 1079 aa13.42□□□□□ -0.26
XRCC4-201ENST00000282268 ZSCAN29Q8IWY8 852 aaPredicted RBP13.42□□□□□ -0.26
XRCC4-201ENST00000282268 MICALL2Q8IY33 904 aa13.42□□□□□ -0.26
XRCC4-201ENST00000282268 OSBPL5Q9H0X9 879 aaPredicted RBP13.42□□□□□ -0.26
XRCC4-201ENST00000282268 MKNK2Q9HBH9 465 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms