RNA–Protein interactions for RNA: ENST00000281821.6

EPHA4-201, Transcript of EPH receptor A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHA4, Length 6,346 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-201ENST00000281821 TRPM3Q9HCF6 1732 aaPredicted RBP9.01□□□□□ -0.97
EPHA4-201ENST00000281821 FAM205AQ6ZU69 1335 aa9.01□□□□□ -0.97
EPHA4-201ENST00000281821 WDR19Q8NEZ3 1342 aa9.01□□□□□ -0.97
EPHA4-201ENST00000281821 SALL1Q9NSC2 1324 aa9.01□□□□□ -0.97
EPHA4-201ENST00000281821 CREB3L3Q68CJ9 461 aa9.01□□□□□ -0.97
EPHA4-201ENST00000281821 MIGA1Q8NAN2 632 aa9.01□□□□□ -0.97
EPHA4-201ENST00000281821 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.01□□□□□ -0.97
EPHA4-201ENST00000281821 SNX21Q969T3 373 aa9.01□□□□□ -0.97
EPHA4-201ENST00000281821 DNAI2Q9GZS0 605 aa9.01□□□□□ -0.97
EPHA4-201ENST00000281821 USP54Q70EL1 1684 aa9.01□□□□□ -0.97
EPHA4-201ENST00000281821 TOP1P11387 765 aaKnown RBP9.01□□□□□ -0.97
EPHA4-201ENST00000281821 RBM25P49756 843 aaKnown RBP9.01□□□□□ -0.97
EPHA4-201ENST00000281821 IRX3P78415 501 aaPredicted RBP9.01□□□□□ -0.97
EPHA4-201ENST00000281821 RASGRF1Q13972 1273 aa9.01□□□□□ -0.97
EPHA4-201ENST00000281821 DOK7Q18PE1 504 aa9.01□□□□□ -0.97
EPHA4-201ENST00000281821 RBM46Q8TBY0 533 aaKnown RBP9.01□□□□□ -0.97
EPHA4-201ENST00000281821 MROH7-TTC4A0A0A0MT08 1334 aa9□□□□□ -0.97
EPHA4-201ENST00000281821 GPSM2P81274 684 aa9□□□□□ -0.97
EPHA4-201ENST00000281821 PPARAQ07869 468 aa9□□□□□ -0.97
EPHA4-201ENST00000281821 EAPPQ56P03 285 aaPredicted RBP9□□□□□ -0.97
EPHA4-201ENST00000281821 IFNL3Q8IZI9 196 aa9□□□□□ -0.97
EPHA4-201ENST00000281821 FAM84BQ96KN1 310 aaPredicted RBP9□□□□□ -0.97
EPHA4-201ENST00000281821 AATFQ9NY61 560 aaKnown RBP eCLIP9□□□□□ -0.97
EPHA4-201ENST00000281821 R3HCC1Q9Y3T6 440 aaKnown RBP9□□□□□ -0.97
EPHA4-201ENST00000281821 DDAH1O94760 285 aa9□□□□□ -0.97
EPHA4-201ENST00000281821 EPHA10Q5JZY3 1008 aa9□□□□□ -0.97
EPHA4-201ENST00000281821 PPP4R3AQ6IN85 833 aa9□□□□□ -0.97
EPHA4-201ENST00000281821 FAM160B2Q86V87 743 aa9□□□□□ -0.97
EPHA4-201ENST00000281821 DGKHQ86XP1 1220 aa9□□□□□ -0.97
EPHA4-201ENST00000281821 KLF18A0A0U1RQI7 1052 aa9□□□□□ -0.97
EPHA4-201ENST00000281821 RSBN1LQ6PCB5 846 aaPredicted RBP9□□□□□ -0.97
EPHA4-201ENST00000281821 DBNDD1Q9H9R9 158 aa9□□□□□ -0.97
EPHA4-201ENST00000281821 TBC1D32Q96NH3 1257 aa9□□□□□ -0.97
EPHA4-201ENST00000281821 ARMT1Q9H993 441 aa9□□□□□ -0.97
EPHA4-201ENST00000281821 DACH1Q9UI36 760 aa9□□□□□ -0.97
EPHA4-201ENST00000281821 UBN2Q6ZU65 1347 aa9□□□□□ -0.97
EPHA4-201ENST00000281821 SLC1A4P43007 532 aa8.99□□□□□ -0.97
EPHA4-201ENST00000281821 CFAP100Q494V2 611 aa8.99□□□□□ -0.97
EPHA4-201ENST00000281821 CERKLQ49MI3 558 aaPredicted RBP8.99□□□□□ -0.97
EPHA4-201ENST00000281821 SAMD1Q6SPF0 538 aaPredicted RBP8.99□□□□□ -0.97
EPHA4-201ENST00000281821 TMEM179Q6ZVK1 233 aa8.99□□□□□ -0.97
EPHA4-201ENST00000281821 CCDC39Q9UFE4 941 aa8.99□□□□□ -0.97
EPHA4-201ENST00000281821 NLRP5P59047 1200 aa8.99□□□□□ -0.97
EPHA4-201ENST00000281821 PPP4CP60510 307 aa8.99□□□□□ -0.97
EPHA4-201ENST00000281821 NAT10Q9H0A0 1025 aaKnown RBP8.99□□□□□ -0.97
EPHA4-201ENST00000281821 ORC3Q9UBD5 711 aaPredicted RBP8.99□□□□□ -0.97
EPHA4-201ENST00000281821 VEGFAP15692 232 aaPredicted RBP8.99□□□□□ -0.97
EPHA4-201ENST00000281821 MCF2L2Q86YR7 1114 aa8.99□□□□□ -0.97
EPHA4-201ENST00000281821 FBXO40Q9UH90 709 aa8.99□□□□□ -0.97
EPHA4-201ENST00000281821 CRKP46108 304 aa8.99□□□□□ -0.97
EPHA4-201ENST00000281821 BRF1Q92994 677 aa8.99□□□□□ -0.97
EPHA4-201ENST00000281821 SLC4A9Q96Q91 983 aa8.99□□□□□ -0.97
EPHA4-201ENST00000281821 A0A0G2JLW4 131 aa8.98□□□□□ -0.97
EPHA4-201ENST00000281821 KINO60870 393 aaKnown RBP8.98□□□□□ -0.97
EPHA4-201ENST00000281821 KDM4AO75164 1064 aa8.98□□□□□ -0.97
EPHA4-201ENST00000281821 NPM3O75607 178 aaKnown RBP8.98□□□□□ -0.97
EPHA4-201ENST00000281821 FOSP01100 380 aaPredicted RBP8.98□□□□□ -0.97
EPHA4-201ENST00000281821 OSBPP22059 807 aa8.98□□□□□ -0.97
EPHA4-201ENST00000281821 RFX5P48382 616 aaPredicted RBP8.98□□□□□ -0.97
EPHA4-201ENST00000281821 DDR1Q08345 913 aa8.98□□□□□ -0.97
EPHA4-201ENST00000281821 STIM1Q13586 685 aa8.98□□□□□ -0.97
EPHA4-201ENST00000281821 ASPRV1Q53RT3 343 aa8.98□□□□□ -0.97
EPHA4-201ENST00000281821 CDC37L1Q7L3B6 337 aa8.98□□□□□ -0.97
EPHA4-201ENST00000281821 TGFBRAP1Q8WUH2 860 aa8.98□□□□□ -0.97
EPHA4-201ENST00000281821 LTBP3Q9NS15 1303 aa8.98□□□□□ -0.97
EPHA4-201ENST00000281821 USP17L12C9JPN9 530 aa8.98□□□□□ -0.97
EPHA4-201ENST00000281821 USP17L21D6R901 530 aa8.98□□□□□ -0.97
EPHA4-201ENST00000281821 ZNF827Q17R98 1081 aa8.98□□□□□ -0.97
EPHA4-201ENST00000281821 ABCB5Q2M3G0 1257 aa8.98□□□□□ -0.97
EPHA4-201ENST00000281821 MAPKAPK5Q8IW41 473 aa8.98□□□□□ -0.97
EPHA4-201ENST00000281821 CSRNP1Q96S65 589 aa8.98□□□□□ -0.97
EPHA4-201ENST00000281821 SPDYE3A6NKU9 549 aa8.98□□□□□ -0.97
EPHA4-201ENST00000281821 RAD17O75943 681 aa8.98□□□□□ -0.97
EPHA4-201ENST00000281821 HSPA4P34932 840 aa8.98□□□□□ -0.97
EPHA4-201ENST00000281821 STXBP4Q6ZWJ1 553 aa8.98□□□□□ -0.97
EPHA4-201ENST00000281821 ATG9AQ7Z3C6 839 aa8.98□□□□□ -0.97
EPHA4-201ENST00000281821 FAM151AQ8WW52 585 aa8.98□□□□□ -0.97
EPHA4-201ENST00000281821 ADARB2Q9NS39 739 aaKnown RBP8.98□□□□□ -0.97
EPHA4-201ENST00000281821 TPM1P09493 284 aa8.98□□□□□ -0.97
EPHA4-201ENST00000281821 ICA1Q05084 483 aa8.98□□□□□ -0.97
EPHA4-201ENST00000281821 GPC2Q8N158 579 aa8.98□□□□□ -0.97
EPHA4-201ENST00000281821 SMARCC2Q8TAQ2 1214 aa8.98□□□□□ -0.97
EPHA4-201ENST00000281821 LRRC4BQ9NT99 713 aa8.98□□□□□ -0.97
EPHA4-201ENST00000281821 DEXIO95424 95 aa8.98□□□□□ -0.97
EPHA4-201ENST00000281821 CHRNA5P30532 468 aa8.98□□□□□ -0.97
EPHA4-201ENST00000281821 ZC3H15Q8WU90 426 aaKnown RBP8.98□□□□□ -0.97
EPHA4-201ENST00000281821 MTMR7Q9Y216 660 aa8.98□□□□□ -0.97
EPHA4-201ENST00000281821 IL1R1P14778 569 aa8.97□□□□□ -0.97
EPHA4-201ENST00000281821 KIF4BQ2VIQ3 1234 aa8.97□□□□□ -0.97
EPHA4-201ENST00000281821 BRAPQ7Z569 592 aa8.97□□□□□ -0.97
EPHA4-201ENST00000281821 SBK1Q52WX2 424 aa8.97□□□□□ -0.97
EPHA4-201ENST00000281821 MAP4K1Q92918 833 aa8.97□□□□□ -0.97
EPHA4-201ENST00000281821 FAM163AQ96GL9 167 aaPredicted RBP8.97□□□□□ -0.97
EPHA4-201ENST00000281821 ZMYM6O95789 1325 aa8.97□□□□□ -0.97
EPHA4-201ENST00000281821 CASP7P55210 303 aa8.97□□□□□ -0.97
EPHA4-201ENST00000281821 HAND2P61296 217 aa8.97□□□□□ -0.97
EPHA4-201ENST00000281821 ZNF274Q96GC6 653 aaPredicted RBP8.97□□□□□ -0.97
EPHA4-201ENST00000281821 TCP11L1Q9NUJ3 509 aa8.97□□□□□ -0.97
EPHA4-201ENST00000281821 ZBTB22O15209 634 aa8.97□□□□□ -0.97
EPHA4-201ENST00000281821 WDR78Q5VTH9 848 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms